RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 ZNF296Q8WUU4 475 aaPredicted RBP9.69□□□□□ -0.86
LDHA-223ENST00000545215 AKAP11Q9UKA4 1901 aa9.69□□□□□ -0.86
LDHA-223ENST00000545215 BRCA2P51587 3418 aa9.68□□□□□ -0.86
LDHA-223ENST00000545215 C6orf132Q5T0Z8 1188 aa9.68□□□□□ -0.86
LDHA-223ENST00000545215 GPC2Q8N158 579 aa9.68□□□□□ -0.86
LDHA-223ENST00000545215 NLRP7Q8WX94 980 aa9.68□□□□□ -0.86
LDHA-223ENST00000545215 CSRNP1Q96S65 589 aa9.68□□□□□ -0.86
LDHA-223ENST00000545215 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.68□□□□□ -0.86
LDHA-223ENST00000545215 ITGB4P16144 1822 aa9.67□□□□□ -0.86
LDHA-223ENST00000545215 PPEF1O14829 653 aaPredicted RBP9.67□□□□□ -0.86
LDHA-223ENST00000545215 MYSM1Q5VVJ2 828 aa9.67□□□□□ -0.86
LDHA-223ENST00000545215 USP50Q70EL3 339 aaPredicted RBP9.67□□□□□ -0.86
LDHA-223ENST00000545215 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.67□□□□□ -0.86
LDHA-223ENST00000545215 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
LDHA-223ENST00000545215 CGNL1Q0VF96 1302 aa9.67□□□□□ -0.86
LDHA-223ENST00000545215 TTC21AQ8NDW8 1320 aa9.67□□□□□ -0.86
LDHA-223ENST00000545215 USP42Q9H9J4 1324 aaKnown RBP9.67□□□□□ -0.86
LDHA-223ENST00000545215 HUNKP57058 714 aa9.66□□□□□ -0.86
LDHA-223ENST00000545215 RGMBQ6NW40 437 aa9.66□□□□□ -0.86
LDHA-223ENST00000545215 POLR3EQ9NVU0 708 aa9.66□□□□□ -0.86
LDHA-223ENST00000545215 MTMR10Q9NXD2 777 aa9.66□□□□□ -0.86
LDHA-223ENST00000545215 ASAP1Q9ULH1 1129 aa9.66□□□□□ -0.86
LDHA-223ENST00000545215 FAM208AQ9UK61 1670 aaKnown RBP9.65□□□□□ -0.86
LDHA-223ENST00000545215 FZD9O00144 591 aa9.65□□□□□ -0.86
LDHA-223ENST00000545215 TRIM26Q12899 539 aaPredicted RBP9.65□□□□□ -0.86
LDHA-223ENST00000545215 NOM1Q5C9Z4 860 aaKnown RBP9.65□□□□□ -0.86
LDHA-223ENST00000545215 CCDC82Q8N4S0 544 aa9.65□□□□□ -0.86
LDHA-223ENST00000545215 MAP3K19Q56UN5 1328 aa9.65□□□□□ -0.86
LDHA-223ENST00000545215 CNTNAP4Q9C0A0 1308 aa9.65□□□□□ -0.86
LDHA-223ENST00000545215 LTN1O94822 1766 aa9.64□□□□□ -0.87
LDHA-223ENST00000545215 EPS15P42566 896 aa9.64□□□□□ -0.87
LDHA-223ENST00000545215 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
LDHA-223ENST00000545215 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
LDHA-223ENST00000545215 LTV1Q96GA3 475 aaPredicted RBP9.64□□□□□ -0.87
LDHA-223ENST00000545215 CD163L1Q9NR16 1453 aa9.64□□□□□ -0.87
LDHA-223ENST00000545215 PCDH11XQ9BZA7 1347 aa9.64□□□□□ -0.87
LDHA-223ENST00000545215 PCDH11YQ9BZA8 1340 aa9.64□□□□□ -0.87
LDHA-223ENST00000545215 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
LDHA-223ENST00000545215 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
LDHA-223ENST00000545215 Q7L0L9 218 aa9.63□□□□□ -0.87
LDHA-223ENST00000545215 IP6K1Q92551 441 aa9.63□□□□□ -0.87
LDHA-223ENST00000545215 ZNF622Q969S3 477 aaKnown RBP eCLIP9.63□□□□□ -0.87
LDHA-223ENST00000545215 ZNF408Q9H9D4 720 aa9.63□□□□□ -0.87
LDHA-223ENST00000545215 NRXN2Q9P2S2 1712 aa9.63□□□□□ -0.87
LDHA-223ENST00000545215 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
LDHA-223ENST00000545215 HTTP42858 3142 aa9.62□□□□□ -0.87
LDHA-223ENST00000545215 CYP27B1O15528 508 aa9.62□□□□□ -0.87
LDHA-223ENST00000545215 CLK2P49760 499 aaKnown RBP9.62□□□□□ -0.87
LDHA-223ENST00000545215 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
LDHA-223ENST00000545215 POM121Q96HA1 1249 aa9.62□□□□□ -0.87
LDHA-223ENST00000545215 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
LDHA-223ENST00000545215 TBC1D2Q9BYX2 928 aa9.62□□□□□ -0.87
LDHA-223ENST00000545215 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
LDHA-223ENST00000545215 TMEM265A0A087WTH1 108 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 GPR25O00155 361 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 SCNN1DP51172 638 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 PRSS12P56730 875 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 ZNF454Q8N9F8 522 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 ADAM33Q9BZ11 813 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 PGAP2Q9UHJ9 254 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 PDZRN3Q9UPQ7 1066 aa9.61□□□□□ -0.87
LDHA-223ENST00000545215 KIAA0100Q14667 2235 aaKnown RBP9.61□□□□□ -0.87
LDHA-223ENST00000545215 SPDYE5A6NIY4 337 aa9.6□□□□□ -0.87
LDHA-223ENST00000545215 SERPINB2P05120 415 aa9.6□□□□□ -0.87
LDHA-223ENST00000545215 ZNF157P51786 506 aaPredicted RBP9.6□□□□□ -0.87
LDHA-223ENST00000545215 ATG3Q9NT62 314 aa9.6□□□□□ -0.87
LDHA-223ENST00000545215 LAMA3Q16787 3333 aa9.6□□□□□ -0.87
LDHA-223ENST00000545215 KDRP35968 1356 aa9.6□□□□□ -0.87
LDHA-223ENST00000545215 ZNF831Q5JPB2 1677 aa9.6□□□□□ -0.87
LDHA-223ENST00000545215 TNFRSF10AO00220 468 aa9.59□□□□□ -0.87
LDHA-223ENST00000545215 NFIXQ14938 502 aa9.59□□□□□ -0.87
LDHA-223ENST00000545215 DIXDC1Q155Q3 683 aa9.59□□□□□ -0.87
LDHA-223ENST00000545215 BANK1Q8NDB2 785 aa9.59□□□□□ -0.87
LDHA-223ENST00000545215 ARMC5Q96C12 935 aa9.59□□□□□ -0.87
LDHA-223ENST00000545215 ZNF277Q9NRM2 450 aaPredicted RBP9.59□□□□□ -0.87
LDHA-223ENST00000545215 CENPFP49454 3210 aa9.59□□□□□ -0.87
LDHA-223ENST00000545215 RAD21O60216 631 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 SLC10A3P09131 477 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 RFC5P40937 340 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 FKBP4Q02790 459 aaKnown RBP eCLIP9.58□□□□□ -0.88
LDHA-223ENST00000545215 RAPGEF4Q8WZA2 1011 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 DPF3Q92784 378 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 TMOD3Q9NYL9 352 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 CARMIL3Q8ND23 1372 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 MUC3AQ02505 3323 aa9.58□□□□□ -0.88
LDHA-223ENST00000545215 COL5A3P25940 1745 aaPredicted RBP9.58□□□□□ -0.88
LDHA-223ENST00000545215 MYH14Q7Z406 1995 aaKnown RBP9.58□□□□□ -0.88
LDHA-223ENST00000545215 FKTNO75072 461 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 TATP17735 454 aaPredicted RBP9.57□□□□□ -0.88
LDHA-223ENST00000545215 PDE6BP35913 854 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 PPP2R2DQ66LE6 453 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 CDC37L1Q7L3B6 337 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 CNKSR1Q969H4 720 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 GJA3Q9Y6H8 435 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 SLX4Q8IY92 1834 aa9.57□□□□□ -0.88
LDHA-223ENST00000545215 ZPR1O75312 459 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 NUDT7P0C024 238 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms