RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 RTKN2Q8IZC4 609 aa27.69■■■□□ 2.02
OTUB1-212ENST00000543988 FKBP4Q02790 459 aaKnown RBP eCLIP27.68■■■□□ 2.02
OTUB1-212ENST00000543988 CC2D2BQ6DHV5 1058 aa27.68■■■□□ 2.02
OTUB1-212ENST00000543988 ATP6V0A2Q9Y487 856 aa27.68■■■□□ 2.02
OTUB1-212ENST00000543988 COL4A1P02462 1669 aa27.68■■■□□ 2.02
OTUB1-212ENST00000543988 BBOX1O75936 387 aa27.67■■■□□ 2.02
OTUB1-212ENST00000543988 RARSP54136 660 aaKnown RBP27.67■■■□□ 2.02
OTUB1-212ENST00000543988 CASP7P55210 303 aa27.67■■■□□ 2.02
OTUB1-212ENST00000543988 CTSWP56202 376 aa27.67■■■□□ 2.02
OTUB1-212ENST00000543988 CCDC152Q4G0S7 254 aa27.66■■■□□ 2.02
OTUB1-212ENST00000543988 ZNF526Q8TF50 670 aaPredicted RBP27.66■■■□□ 2.02
OTUB1-212ENST00000543988 CELF1Q92879 486 aaKnown RBP27.66■■■□□ 2.02
OTUB1-212ENST00000543988 CCDC85AQ96PX6 553 aaPredicted RBP27.66■■■□□ 2.02
OTUB1-212ENST00000543988 ZNF277Q9NRM2 450 aaPredicted RBP27.65■■■□□ 2.02
OTUB1-212ENST00000543988 SBF1O95248 1867 aa27.64■■■□□ 2.02
OTUB1-212ENST00000543988 ALDH1L1O75891 902 aa27.64■■■□□ 2.02
OTUB1-212ENST00000543988 SRCIN1Q9C0H9 1055 aa27.64■■■□□ 2.02
OTUB1-212ENST00000543988 SEC31BQ9NQW1 1179 aa27.64■■■□□ 2.02
OTUB1-212ENST00000543988 PSMD1Q99460 953 aa27.63■■■□□ 2.01
OTUB1-212ENST00000543988 ZC3H4Q9UPT8 1303 aaKnown RBP27.63■■■□□ 2.01
OTUB1-212ENST00000543988 BRPF1P55201 1214 aaPredicted RBP27.62■■■□□ 2.01
OTUB1-212ENST00000543988 SP8Q8IXZ3 490 aa27.62■■■□□ 2.01
OTUB1-212ENST00000543988 TTLL11Q8NHH1 800 aa27.62■■■□□ 2.01
OTUB1-212ENST00000543988 PLA2G12BQ9BX93 195 aa27.62■■■□□ 2.01
OTUB1-212ENST00000543988 GRM8O00222 908 aa27.61■■■□□ 2.01
OTUB1-212ENST00000543988 GRIPAP1Q4V328 841 aa27.61■■■□□ 2.01
OTUB1-212ENST00000543988 TMC4Q7Z404 712 aa27.61■■■□□ 2.01
OTUB1-212ENST00000543988 TMX4Q9H1E5 349 aaPredicted RBP27.61■■■□□ 2.01
OTUB1-212ENST00000543988 NOB1Q9ULX3 412 aaKnown RBP27.61■■■□□ 2.01
OTUB1-212ENST00000543988 GREM2Q9H772 168 aa27.6■■■□□ 2.01
OTUB1-212ENST00000543988 GPBP1L1Q9HC44 474 aaPredicted RBP27.6■■■□□ 2.01
OTUB1-212ENST00000543988 TIAM2Q8IVF5 1701 aa27.6■■■□□ 2.01
OTUB1-212ENST00000543988 RPS8P62241 208 aaKnown RBP27.59■■■□□ 2.01
OTUB1-212ENST00000543988 TAF1P21675 1872 aa27.59■■■□□ 2.01
OTUB1-212ENST00000543988 RTL9Q8NET4 1388 aa27.59■■■□□ 2.01
OTUB1-212ENST00000543988 IARSP41252 1262 aaKnown RBP27.58■■■□□ 2.01
OTUB1-212ENST00000543988 C9orf78Q9NZ63 289 aaPredicted RBP27.58■■■□□ 2.01
OTUB1-212ENST00000543988 KIF16BQ96L93 1317 aa27.58■■■□□ 2.01
OTUB1-212ENST00000543988 LRRC37AA6NMS7 1700 aa27.58■■■□□ 2.01
OTUB1-212ENST00000543988 FAM161AQ3B820 660 aa27.56■■■□□ 2
OTUB1-212ENST00000543988 DPP8Q6V1X1 898 aaPredicted RBP27.56■■■□□ 2
OTUB1-212ENST00000543988 BCAR3O75815 825 aa27.55■■■□□ 2
OTUB1-212ENST00000543988 FOXO4P98177 505 aa27.55■■■□□ 2
OTUB1-212ENST00000543988 MPNDQ8N594 471 aa27.55■■■□□ 2
OTUB1-212ENST00000543988 RTFDC1Q9BY42 306 aaPredicted RBP27.55■■■□□ 2
OTUB1-212ENST00000543988 API5Q9BZZ5 524 aaKnown RBP27.55■■■□□ 2
OTUB1-212ENST00000543988 DUOX1Q9NRD9 1551 aa27.55■■■□□ 2
OTUB1-212ENST00000543988 COL4A5P29400 1685 aa27.55■■■□□ 2
OTUB1-212ENST00000543988 CSF1RP07333 972 aa27.54■■■□□ 2
OTUB1-212ENST00000543988 EPHA10Q5JZY3 1008 aa27.54■■■□□ 2
OTUB1-212ENST00000543988 ANKRD18AQ8IVF6 992 aa27.54■■■□□ 2
OTUB1-212ENST00000543988 CDC5LQ99459 802 aaKnown RBP27.54■■■□□ 2
OTUB1-212ENST00000543988 UTYO14607 1347 aa27.53■■■□□ 2
OTUB1-212ENST00000543988 NBPF7P0C2Y1 421 aaPredicted RBP27.53■■■□□ 2
OTUB1-212ENST00000543988 NMRK2Q9NPI5 230 aa27.53■■■□□ 2
OTUB1-212ENST00000543988 KDM2BQ8NHM5 1336 aa27.52■■■□□ 2
OTUB1-212ENST00000543988 GPSM2P81274 684 aa27.52■■■□□ 2
OTUB1-212ENST00000543988 CCDC88AQ3V6T2 1871 aa27.51■■□□□ 1.99
OTUB1-212ENST00000543988 GLTPD2A6NH11 291 aa27.51■■□□□ 1.99
OTUB1-212ENST00000543988 ITGA6P23229 1130 aa27.51■■□□□ 1.99
OTUB1-212ENST00000543988 LARGE2Q8N3Y3 721 aa27.51■■□□□ 1.99
OTUB1-212ENST00000543988 SUCLG2Q96I99 432 aa27.51■■□□□ 1.99
OTUB1-212ENST00000543988 MYH3P11055 1940 aa27.5■■□□□ 1.99
OTUB1-212ENST00000543988 DICER1Q9UPY3 1922 aaKnown RBP27.5■■□□□ 1.99
OTUB1-212ENST00000543988 PPIP5K2O43314 1243 aa27.5■■□□□ 1.99
OTUB1-212ENST00000543988 CCT4P50991 539 aaKnown RBP27.5■■□□□ 1.99
OTUB1-212ENST00000543988 AOC3Q16853 763 aa27.5■■□□□ 1.99
OTUB1-212ENST00000543988 SUPT20HQ8NEM7 779 aa27.5■■□□□ 1.99
OTUB1-212ENST00000543988 ARHGAP45Q92619 1136 aa27.5■■□□□ 1.99
OTUB1-212ENST00000543988 NSFL1CQ9UNZ2 370 aaKnown RBP27.5■■□□□ 1.99
OTUB1-212ENST00000543988 ZNF541Q9H0D2 1346 aa27.49■■□□□ 1.99
OTUB1-212ENST00000543988 LMBR1LQ6UX01 489 aa27.49■■□□□ 1.99
OTUB1-212ENST00000543988 KAZALD1Q96I82 304 aa27.49■■□□□ 1.99
OTUB1-212ENST00000543988 USP44Q9H0E7 712 aa27.49■■□□□ 1.99
OTUB1-212ENST00000543988 LTBP1Q14766 1721 aa27.48■■□□□ 1.99
OTUB1-212ENST00000543988 JDP2Q8WYK2 163 aa27.48■■□□□ 1.99
OTUB1-212ENST00000543988 FRAT1Q92837 279 aaPredicted RBP27.48■■□□□ 1.99
OTUB1-212ENST00000543988 CHMP3Q9Y3E7 222 aa27.48■■□□□ 1.99
OTUB1-212ENST00000543988 KIF3CO14782 793 aa27.47■■□□□ 1.99
OTUB1-212ENST00000543988 TRIM27P14373 513 aa27.47■■□□□ 1.99
OTUB1-212ENST00000543988 BSDC1Q9NW68 430 aaPredicted RBP27.47■■□□□ 1.99
OTUB1-212ENST00000543988 POLLQ9UGP5 575 aa27.47■■□□□ 1.99
OTUB1-212ENST00000543988 TNNQ9UQP3 1299 aa27.47■■□□□ 1.99
OTUB1-212ENST00000543988 FZD9O00144 591 aa27.46■■□□□ 1.99
OTUB1-212ENST00000543988 IPO8O15397 1037 aaKnown RBP27.46■■□□□ 1.99
OTUB1-212ENST00000543988 KIAA2012Q0VF49 1180 aa27.46■■□□□ 1.99
OTUB1-212ENST00000543988 DPY19L2Q6NUT2 758 aa27.46■■□□□ 1.99
OTUB1-212ENST00000543988 NIM1KQ8IY84 436 aa27.46■■□□□ 1.99
OTUB1-212ENST00000543988 VPS33BQ9H267 617 aa27.46■■□□□ 1.99
OTUB1-212ENST00000543988 PODXL2Q9NZ53 605 aa27.46■■□□□ 1.99
OTUB1-212ENST00000543988 ANKRD18BA2A2Z9 1011 aa27.45■■□□□ 1.98
OTUB1-212ENST00000543988 IGHMBP2P38935 993 aaKnown RBP27.45■■□□□ 1.98
OTUB1-212ENST00000543988 ATF7IPQ6VMQ6 1270 aa27.45■■□□□ 1.98
OTUB1-212ENST00000543988 TBC1D16Q8TBP0 767 aa27.45■■□□□ 1.98
OTUB1-212ENST00000543988 GPR101Q96P66 508 aaPredicted RBP27.45■■□□□ 1.98
OTUB1-212ENST00000543988 BICC1Q9H694 974 aaKnown RBP27.45■■□□□ 1.98
OTUB1-212ENST00000543988 ANKIB1Q9P2G1 1089 aa27.45■■□□□ 1.98
OTUB1-212ENST00000543988 C6orf229H3BNL8 230 aa27.44■■□□□ 1.98
OTUB1-212ENST00000543988 DDNO94850 711 aaPredicted RBP27.44■■□□□ 1.98
OTUB1-212ENST00000543988 UFL1O94874 794 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms