RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ATP6V0A2Q9Y487 856 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
GABPB1-206ENST00000543881 GMPSP49915 693 aaPredicted RBP15.54■□□□□ 0.08
GABPB1-206ENST00000543881 PROSER3Q2NL68 480 aa15.54■□□□□ 0.08
GABPB1-206ENST00000543881 GIGYF2Q6Y7W6 1299 aaKnown RBP15.54■□□□□ 0.08
GABPB1-206ENST00000543881 PPP1R42Q7Z4L9 355 aa15.54■□□□□ 0.08
GABPB1-206ENST00000543881 RUNDC1Q96C34 613 aa15.54■□□□□ 0.08
GABPB1-206ENST00000543881 ANXA1P04083 346 aa15.53■□□□□ 0.08
GABPB1-206ENST00000543881 BRPF1P55201 1214 aaPredicted RBP15.53■□□□□ 0.08
GABPB1-206ENST00000543881 WDR43Q15061 677 aaKnown RBP eCLIP15.53■□□□□ 0.08
GABPB1-206ENST00000543881 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
GABPB1-206ENST00000543881 SUPT20HQ8NEM7 779 aa15.53■□□□□ 0.08
GABPB1-206ENST00000543881 ZNF408Q9H9D4 720 aa15.53■□□□□ 0.08
GABPB1-206ENST00000543881 PGAP2Q9UHJ9 254 aa15.53■□□□□ 0.08
GABPB1-206ENST00000543881 CHL1O00533 1208 aa15.52■□□□□ 0.08
GABPB1-206ENST00000543881 PARP10Q53GL7 1025 aa15.52■□□□□ 0.08
GABPB1-206ENST00000543881 CIAPIN1Q6FI81 312 aa15.52■□□□□ 0.08
GABPB1-206ENST00000543881 RTFDC1Q9BY42 306 aaPredicted RBP15.52■□□□□ 0.08
GABPB1-206ENST00000543881 ABCC4O15439 1325 aa15.52■□□□□ 0.08
GABPB1-206ENST00000543881 HIRAP54198 1017 aaPredicted RBP15.52■□□□□ 0.07
GABPB1-206ENST00000543881 DPP8Q6V1X1 898 aaPredicted RBP15.52■□□□□ 0.07
GABPB1-206ENST00000543881 ZC3H15Q8WU90 426 aaKnown RBP15.52■□□□□ 0.07
GABPB1-206ENST00000543881 NECTIN2Q92692 538 aa15.52■□□□□ 0.07
GABPB1-206ENST00000543881 CDHR2Q9BYE9 1310 aa15.51■□□□□ 0.07
GABPB1-206ENST00000543881 RAD17O75943 681 aa15.51■□□□□ 0.07
GABPB1-206ENST00000543881 DGKZQ13574 1117 aa15.51■□□□□ 0.07
GABPB1-206ENST00000543881 TNIP1Q15025 636 aa15.51■□□□□ 0.07
GABPB1-206ENST00000543881 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
GABPB1-206ENST00000543881 CDC37L1Q7L3B6 337 aa15.51■□□□□ 0.07
GABPB1-206ENST00000543881 UTP14AQ9BVJ6 771 aaKnown RBP15.51■□□□□ 0.07
GABPB1-206ENST00000543881 BCL2L13Q9BXK5 485 aa15.51■□□□□ 0.07
GABPB1-206ENST00000543881 BBOX1O75936 387 aa15.5■□□□□ 0.07
GABPB1-206ENST00000543881 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
GABPB1-206ENST00000543881 SP8Q8IXZ3 490 aa15.5■□□□□ 0.07
GABPB1-206ENST00000543881 MPNDQ8N594 471 aa15.5■□□□□ 0.07
GABPB1-206ENST00000543881 TRPM4Q8TD43 1214 aa15.5■□□□□ 0.07
GABPB1-206ENST00000543881 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
GABPB1-206ENST00000543881 NOGQ13253 232 aa15.49■□□□□ 0.07
GABPB1-206ENST00000543881 PCDH10Q9P2E7 1040 aa15.49■□□□□ 0.07
GABPB1-206ENST00000543881 CNOT7Q9UIV1 285 aaKnown RBP15.49■□□□□ 0.07
GABPB1-206ENST00000543881 LAMB2P55268 1798 aa15.49■□□□□ 0.07
GABPB1-206ENST00000543881 COPS6Q7L5N1 327 aa15.48■□□□□ 0.07
GABPB1-206ENST00000543881 ZIC5Q96T25 663 aa15.48■□□□□ 0.07
GABPB1-206ENST00000543881 ANKRD36CQ5JPF3 1778 aa15.48■□□□□ 0.07
GABPB1-206ENST00000543881 SHTN1A0MZ66 631 aa15.47■□□□□ 0.07
GABPB1-206ENST00000543881 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
GABPB1-206ENST00000543881 YDJCA8MPS7 323 aa15.46■□□□□ 0.07
GABPB1-206ENST00000543881 H7C1D1 291 aa15.46■□□□□ 0.07
GABPB1-206ENST00000543881 HCLS1P14317 486 aaPredicted RBP15.46■□□□□ 0.07
GABPB1-206ENST00000543881 HUNKP57058 714 aa15.46■□□□□ 0.07
GABPB1-206ENST00000543881 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
GABPB1-206ENST00000543881 USP48Q86UV5 1035 aa15.46■□□□□ 0.07
GABPB1-206ENST00000543881 MICALL2Q8IY33 904 aa15.46■□□□□ 0.07
GABPB1-206ENST00000543881 DLK2Q6UY11 383 aa15.46■□□□□ 0.06
GABPB1-206ENST00000543881 DDX46Q7L014 1031 aaKnown RBP15.46■□□□□ 0.06
GABPB1-206ENST00000543881 CHPF2Q9P2E5 772 aa15.46■□□□□ 0.06
GABPB1-206ENST00000543881 TAF1P21675 1872 aa15.45■□□□□ 0.06
GABPB1-206ENST00000543881 APAF1O14727 1248 aa15.45■□□□□ 0.06
GABPB1-206ENST00000543881 GRAPQ13588 217 aa15.45■□□□□ 0.06
GABPB1-206ENST00000543881 GRAPLQ8TC17 118 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-206ENST00000543881 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-206ENST00000543881 TNRC18O15417 2968 aaPredicted RBP15.44■□□□□ 0.06
GABPB1-206ENST00000543881 ZNF853P0CG23 659 aa15.44■□□□□ 0.06
GABPB1-206ENST00000543881 CCDC184Q52MB2 194 aa15.44■□□□□ 0.06
GABPB1-206ENST00000543881 HDGFL1Q5TGJ6 251 aa15.44■□□□□ 0.06
GABPB1-206ENST00000543881 SAMD7Q7Z3H4 446 aa15.44■□□□□ 0.06
GABPB1-206ENST00000543881 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
GABPB1-206ENST00000543881 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
GABPB1-206ENST00000543881 POLR2AP24928 1970 aaKnown RBP15.44■□□□□ 0.06
GABPB1-206ENST00000543881 FAM155AB1AL88 458 aaPredicted RBP15.43■□□□□ 0.06
GABPB1-206ENST00000543881 TCIRG1Q13488 830 aa15.43■□□□□ 0.06
GABPB1-206ENST00000543881 HSP90AB3PQ58FF7 597 aa15.43■□□□□ 0.06
GABPB1-206ENST00000543881 RGMBQ6NW40 437 aa15.43■□□□□ 0.06
GABPB1-206ENST00000543881 KRT26Q7Z3Y9 468 aa15.43■□□□□ 0.06
GABPB1-206ENST00000543881 DPF2Q92785 391 aa15.43■□□□□ 0.06
GABPB1-206ENST00000543881 GBA2Q9HCG7 927 aaPredicted RBP15.43■□□□□ 0.06
GABPB1-206ENST00000543881 DUOX1Q9NRD9 1551 aa15.43■□□□□ 0.06
GABPB1-206ENST00000543881 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
GABPB1-206ENST00000543881 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 PSMD14O00487 310 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 HOXB7P09629 217 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 C2orf69Q8N8R5 385 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 ZNF428Q96B54 188 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 SAGE1Q9NXZ1 904 aa15.42■□□□□ 0.06
GABPB1-206ENST00000543881 EGFRP00533 1210 aa15.41■□□□□ 0.06
GABPB1-206ENST00000543881 WASHC4Q2M389 1173 aa15.41■□□□□ 0.06
GABPB1-206ENST00000543881 TBC1D10BQ4KMP7 808 aaPredicted RBP15.41■□□□□ 0.06
GABPB1-206ENST00000543881 CCDC102AQ96A19 550 aa15.41■□□□□ 0.06
GABPB1-206ENST00000543881 LRRC37AA6NMS7 1700 aa15.41■□□□□ 0.06
GABPB1-206ENST00000543881 PDE4DIPQ5VU43 2346 aa15.41■□□□□ 0.06
GABPB1-206ENST00000543881 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-206ENST00000543881 DCPSQ96C86 337 aaKnown RBP15.4■□□□□ 0.06
GABPB1-206ENST00000543881 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
GABPB1-206ENST00000543881 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-206ENST00000543881 AKAP11Q9UKA4 1901 aa15.4■□□□□ 0.06
GABPB1-206ENST00000543881 ADM5C9JUS6 153 aa15.4■□□□□ 0.06
GABPB1-206ENST00000543881 ZNF157P51786 506 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms