RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 DGKZQ13574 1117 aa7.39□□□□□ -1.23
LEMD3-204ENST00000542032 C11orf91Q3C1V1 193 aa7.39□□□□□ -1.23
LEMD3-204ENST00000542032 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
LEMD3-204ENST00000542032 CHSY3Q70JA7 882 aa7.39□□□□□ -1.23
LEMD3-204ENST00000542032 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
LEMD3-204ENST00000542032 EFCC1Q9HA90 598 aa7.39□□□□□ -1.23
LEMD3-204ENST00000542032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.39□□□□□ -1.23
LEMD3-204ENST00000542032 COX20Q5RI15 118 aa7.38□□□□□ -1.23
LEMD3-204ENST00000542032 C11orf16Q9NQ32 467 aa7.38□□□□□ -1.23
LEMD3-204ENST00000542032 PPP1R15AO75807 674 aaPredicted RBP7.37□□□□□ -1.23
LEMD3-204ENST00000542032 VTI1AQ96AJ9 217 aa7.37□□□□□ -1.23
LEMD3-204ENST00000542032 TRIM11Q96F44 468 aa7.37□□□□□ -1.23
LEMD3-204ENST00000542032 PLVAPQ9BX97 442 aa7.37□□□□□ -1.23
LEMD3-204ENST00000542032 GSX2Q9BZM3 304 aa7.37□□□□□ -1.23
LEMD3-204ENST00000542032 IDH3AP50213 366 aa7.36□□□□□ -1.23
LEMD3-204ENST00000542032 CAPN12Q6ZSI9 719 aa7.36□□□□□ -1.23
LEMD3-204ENST00000542032 SAP130Q9H0E3 1048 aa7.36□□□□□ -1.23
LEMD3-204ENST00000542032 TMEM88BA6NKF7 163 aa7.35□□□□□ -1.23
LEMD3-204ENST00000542032 OPLAHO14841 1288 aa7.35□□□□□ -1.23
LEMD3-204ENST00000542032 MICAL2O94851 1124 aa7.35□□□□□ -1.23
LEMD3-204ENST00000542032 ERICH6Q7L0X2 663 aa7.35□□□□□ -1.23
LEMD3-204ENST00000542032 RAB44Q7Z6P3 723 aaPredicted RBP7.35□□□□□ -1.23
LEMD3-204ENST00000542032 PTCD1O75127 700 aaKnown RBP7.34□□□□□ -1.23
LEMD3-204ENST00000542032 ARSDP51689 593 aa7.34□□□□□ -1.23
LEMD3-204ENST00000542032 NEUROD1Q13562 356 aa7.34□□□□□ -1.23
LEMD3-204ENST00000542032 C16orf46Q6P387 395 aa7.34□□□□□ -1.23
LEMD3-204ENST00000542032 IFT43Q96FT9 208 aa7.34□□□□□ -1.23
LEMD3-204ENST00000542032 STARD13Q9Y3M8 1113 aa7.34□□□□□ -1.23
LEMD3-204ENST00000542032 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
LEMD3-204ENST00000542032 EPB42P16452 691 aa7.33□□□□□ -1.24
LEMD3-204ENST00000542032 CCINQ13939 588 aa7.33□□□□□ -1.24
LEMD3-204ENST00000542032 COL9A3Q14050 684 aaPredicted RBP7.33□□□□□ -1.24
LEMD3-204ENST00000542032 FAM26DQ5JW98 314 aa7.33□□□□□ -1.24
LEMD3-204ENST00000542032 BHMTQ93088 406 aa7.33□□□□□ -1.24
LEMD3-204ENST00000542032 APBA3O96018 575 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 EGFRP00533 1210 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 ALAS2P22557 587 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 ATP2B4P23634 1241 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 ADH7P40394 386 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 C20orf204Q6ZNR8 217 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 ETFBKMTQ8IXQ9 262 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 PRDM6Q9NQX0 595 aa7.32□□□□□ -1.24
LEMD3-204ENST00000542032 ELNP15502 786 aa7.31□□□□□ -1.24
LEMD3-204ENST00000542032 MKNK1Q9BUB5 465 aa7.31□□□□□ -1.24
LEMD3-204ENST00000542032 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.31□□□□□ -1.24
LEMD3-204ENST00000542032 MAP3K6O95382 1288 aa7.3□□□□□ -1.24
LEMD3-204ENST00000542032 BRD2P25440 801 aaKnown RBP7.3□□□□□ -1.24
LEMD3-204ENST00000542032 MICALL1Q8N3F8 863 aa7.3□□□□□ -1.24
LEMD3-204ENST00000542032 ZFATQ9P243 1243 aa7.3□□□□□ -1.24
LEMD3-204ENST00000542032 RTCBQ9Y3I0 505 aaKnown RBP7.3□□□□□ -1.24
LEMD3-204ENST00000542032 RNF114Q9Y508 228 aa7.3□□□□□ -1.24
LEMD3-204ENST00000542032 KCNMB2Q9Y691 235 aa7.3□□□□□ -1.24
LEMD3-204ENST00000542032 ALBP02768 609 aa7.29□□□□□ -1.24
LEMD3-204ENST00000542032 NFKB1P19838 968 aa7.29□□□□□ -1.24
LEMD3-204ENST00000542032 SSFA2P28290 1259 aa7.29□□□□□ -1.24
LEMD3-204ENST00000542032 KRTAP5-3Q6L8H2 238 aa7.29□□□□□ -1.24
LEMD3-204ENST00000542032 M0R082 166 aa7.28□□□□□ -1.24
LEMD3-204ENST00000542032 H2AFB1P0C5Y9 115 aa7.28□□□□□ -1.24
LEMD3-204ENST00000542032 H2AFB2P0C5Z0 115 aa7.28□□□□□ -1.24
LEMD3-204ENST00000542032 NAA30Q147X3 362 aaPredicted RBP7.28□□□□□ -1.24
LEMD3-204ENST00000542032 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
LEMD3-204ENST00000542032 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
LEMD3-204ENST00000542032 DNAJB12Q9NXW2 375 aaKnown RBP7.28□□□□□ -1.24
LEMD3-204ENST00000542032 SLC6A14Q9UN76 642 aa7.28□□□□□ -1.24
LEMD3-204ENST00000542032 USP20Q9Y2K6 914 aa7.28□□□□□ -1.24
LEMD3-204ENST00000542032 ZBTB42B2RXF5 422 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 NID1P14543 1247 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 TARSP26639 723 aaKnown RBP7.27□□□□□ -1.25
LEMD3-204ENST00000542032 ILDR2Q71H61 639 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 TRPM4Q8TD43 1214 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 PNMA5Q96PV4 448 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 UBE2OQ9C0C9 1292 aaKnown RBP7.27□□□□□ -1.25
LEMD3-204ENST00000542032 STIM2Q9P246 746 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 SEPT3Q9UH03 358 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 NAGPAQ9UK23 515 aa7.27□□□□□ -1.25
LEMD3-204ENST00000542032 ZBTB39O15060 712 aa7.26□□□□□ -1.25
LEMD3-204ENST00000542032 IRAK1P51617 712 aa7.26□□□□□ -1.25
LEMD3-204ENST00000542032 PRRT3Q5FWE3 981 aa7.26□□□□□ -1.25
LEMD3-204ENST00000542032 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
LEMD3-204ENST00000542032 PHLDB3Q6NSJ2 640 aa7.26□□□□□ -1.25
LEMD3-204ENST00000542032 DHX32Q7L7V1 743 aaKnown RBP7.26□□□□□ -1.25
LEMD3-204ENST00000542032 RGL4Q8IZJ4 473 aa7.26□□□□□ -1.25
LEMD3-204ENST00000542032 TIMELESSQ9UNS1 1208 aa7.26□□□□□ -1.25
LEMD3-204ENST00000542032 XYLBO75191 536 aa7.25□□□□□ -1.25
LEMD3-204ENST00000542032 SASH3O75995 380 aa7.25□□□□□ -1.25
LEMD3-204ENST00000542032 HOXD8P13378 290 aaPredicted RBP7.25□□□□□ -1.25
LEMD3-204ENST00000542032 JAG1P78504 1218 aa7.25□□□□□ -1.25
LEMD3-204ENST00000542032 TRIP4Q15650 581 aaPredicted RBP7.25□□□□□ -1.25
LEMD3-204ENST00000542032 C8orf86Q6ZUL3 223 aa7.25□□□□□ -1.25
LEMD3-204ENST00000542032 FAM229AH3BQW9 127 aa7.24□□□□□ -1.25
LEMD3-204ENST00000542032 RARAP10276 462 aa7.24□□□□□ -1.25
LEMD3-204ENST00000542032 TAL1P17542 331 aaPredicted RBP7.24□□□□□ -1.25
LEMD3-204ENST00000542032 SCNN1AP37088 669 aa7.24□□□□□ -1.25
LEMD3-204ENST00000542032 GPLD1P80108 840 aa7.24□□□□□ -1.25
LEMD3-204ENST00000542032 PCSK7Q16549 785 aa7.24□□□□□ -1.25
LEMD3-204ENST00000542032 KRT25Q7Z3Z0 450 aa7.24□□□□□ -1.25
LEMD3-204ENST00000542032 CMTR1Q8N1G2 835 aaKnown RBP7.24□□□□□ -1.25
LEMD3-204ENST00000542032 ABTB2Q8N961 1025 aa7.24□□□□□ -1.25
LEMD3-204ENST00000542032 HELQQ8TDG4 1101 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms