RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 FSD1Q9BTV5 496 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 LIMCH1Q9UPQ0 1083 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 MED23Q9ULK4 1368 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 ZBTB22O15209 634 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 CASTP20810 708 aaKnown RBP13.56□□□□□ -0.24
LGR5-203ENST00000540815 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
LGR5-203ENST00000540815 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 DBNLQ9UJU6 430 aaKnown RBP13.56□□□□□ -0.24
LGR5-203ENST00000540815 RFX7Q2KHR2 1363 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 RUFY3Q7L099 469 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 ZSWIM6Q9HCJ5 1215 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 JCADQ9P266 1359 aa13.56□□□□□ -0.24
LGR5-203ENST00000540815 VGLL3A8MV65 326 aa13.55□□□□□ -0.24
LGR5-203ENST00000540815 PRPF40AO75400 957 aaKnown RBP13.55□□□□□ -0.24
LGR5-203ENST00000540815 VPS53Q5VIR6 699 aa13.55□□□□□ -0.24
LGR5-203ENST00000540815 LMBR1LQ6UX01 489 aa13.55□□□□□ -0.24
LGR5-203ENST00000540815 AEBP2Q6ZN18 517 aaPredicted RBP13.55□□□□□ -0.24
LGR5-203ENST00000540815 CCDC191Q8NCU4 936 aa13.55□□□□□ -0.24
LGR5-203ENST00000540815 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
LGR5-203ENST00000540815 BCL11BQ9C0K0 894 aaPredicted RBP13.55□□□□□ -0.24
LGR5-203ENST00000540815 A0A0D9SFI3 127 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 ZKSCAN1P17029 563 aaPredicted RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 EDC3Q96F86 508 aaKnown RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 CPA1P15085 419 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 ZSCAN20P17040 1043 aaPredicted RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 ZNF445P59923 1031 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 ADCK5Q3MIX3 580 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 PDRG1Q9NUG6 133 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 TMOD3Q9NYL9 352 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 RPAP1Q9BWH6 1393 aaPredicted RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 ITGB4P16144 1822 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 PDE4CQ08493 712 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 ZSCAN23Q3MJ62 389 aa13.54□□□□□ -0.24
LGR5-203ENST00000540815 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 COL14A1Q05707 1796 aaKnown RBP13.54□□□□□ -0.24
LGR5-203ENST00000540815 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
LGR5-203ENST00000540815 ZSCAN31Q96LW9 406 aaPredicted RBP13.53□□□□□ -0.24
LGR5-203ENST00000540815 SLC27A2O14975 620 aa13.53□□□□□ -0.24
LGR5-203ENST00000540815 KCNJ4P48050 445 aa13.53□□□□□ -0.24
LGR5-203ENST00000540815 COL9A3Q14050 684 aaPredicted RBP13.53□□□□□ -0.24
LGR5-203ENST00000540815 HAUS7Q99871 368 aa13.53□□□□□ -0.24
LGR5-203ENST00000540815 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
LGR5-203ENST00000540815 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
LGR5-203ENST00000540815 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
LGR5-203ENST00000540815 DISP2A7MBM2 1401 aa13.52□□□□□ -0.24
LGR5-203ENST00000540815 ATG9AQ7Z3C6 839 aa13.52□□□□□ -0.24
LGR5-203ENST00000540815 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.24
LGR5-203ENST00000540815 DBNDD2Q9BQY9 259 aa13.52□□□□□ -0.24
LGR5-203ENST00000540815 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.24
LGR5-203ENST00000540815 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.24
LGR5-203ENST00000540815 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.24
LGR5-203ENST00000540815 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.24
LGR5-203ENST00000540815 NDUFB9Q9Y6M9 179 aa13.52□□□□□ -0.24
LGR5-203ENST00000540815 PSMA5P28066 241 aa13.52□□□□□ -0.25
LGR5-203ENST00000540815 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
LGR5-203ENST00000540815 PIGBQ92521 554 aa13.52□□□□□ -0.25
LGR5-203ENST00000540815 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.25
LGR5-203ENST00000540815 TEX13AQ9BXU3 409 aaPredicted RBP13.52□□□□□ -0.25
LGR5-203ENST00000540815 ATG3Q9NT62 314 aa13.52□□□□□ -0.25
LGR5-203ENST00000540815 PLCH1Q4KWH8 1693 aa13.52□□□□□ -0.25
LGR5-203ENST00000540815 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.51□□□□□ -0.25
LGR5-203ENST00000540815 ATP2B3Q16720 1220 aa13.51□□□□□ -0.25
LGR5-203ENST00000540815 SYCE3A1L190 88 aa13.51□□□□□ -0.25
LGR5-203ENST00000540815 MBD3O95983 291 aa13.51□□□□□ -0.25
LGR5-203ENST00000540815 CHGBP05060 677 aa13.51□□□□□ -0.25
LGR5-203ENST00000540815 IL15P40933 162 aaPredicted RBP13.51□□□□□ -0.25
LGR5-203ENST00000540815 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
LGR5-203ENST00000540815 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
LGR5-203ENST00000540815 COL16A1Q07092 1604 aaPredicted RBP13.51□□□□□ -0.25
LGR5-203ENST00000540815 LARGE1O95461 756 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 TSGA10IPQ3SY00 556 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 DNAJC10Q8IXB1 793 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 TAF6LQ9Y6J9 622 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 LRP6O75581 1613 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 TAF5LO75529 589 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 CIAO1O76071 339 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
LGR5-203ENST00000540815 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
LGR5-203ENST00000540815 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
LGR5-203ENST00000540815 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
LGR5-203ENST00000540815 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
LGR5-203ENST00000540815 ZNF609O15014 1411 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 EYA2O00167 538 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
LGR5-203ENST00000540815 TICAM2Q86XR7 235 aa13.49□□□□□ -0.25
LGR5-203ENST00000540815 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms