RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TOB2Q14106 344 aaPredicted RBP16.78■□□□□ 0.28
INO80E-203ENST00000540562 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
INO80E-203ENST00000540562 KRT85P78386 507 aa16.78■□□□□ 0.28
INO80E-203ENST00000540562 GPHNQ9NQX3 736 aaPredicted RBP16.77■□□□□ 0.28
INO80E-203ENST00000540562 PYCARDQ9ULZ3 195 aa16.77■□□□□ 0.28
INO80E-203ENST00000540562 LTN1O94822 1766 aa16.77■□□□□ 0.27
INO80E-203ENST00000540562 ZNF500O60304 480 aaPredicted RBP16.77■□□□□ 0.27
INO80E-203ENST00000540562 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.27
INO80E-203ENST00000540562 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.27
INO80E-203ENST00000540562 A1BGP04217 495 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 TATP17735 454 aaPredicted RBP16.76■□□□□ 0.27
INO80E-203ENST00000540562 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
INO80E-203ENST00000540562 LRMPQ12912 555 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 TTLL7Q6ZT98 887 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 NRBP1Q9UHY1 535 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 TNMDQ9H2S6 317 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 COL15A1P39059 1388 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 NR1I2O75469 434 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 HOXB7P09629 217 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 PTGS1P23219 599 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 ANO6Q4KMQ2 910 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 TNNI3KQ59H18 835 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 RNF20Q5VTR2 975 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 FAM184AQ8NB25 1140 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 FPGT-TNNI3KV9GXZ4 949 aa16.76■□□□□ 0.27
INO80E-203ENST00000540562 ERBB3P21860 1342 aa16.75■□□□□ 0.27
INO80E-203ENST00000540562 CABP4P57796 275 aa16.75■□□□□ 0.27
INO80E-203ENST00000540562 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
INO80E-203ENST00000540562 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
INO80E-203ENST00000540562 TAF5LO75529 589 aa16.75■□□□□ 0.27
INO80E-203ENST00000540562 CYP21A2P08686 494 aa16.75■□□□□ 0.27
INO80E-203ENST00000540562 MTX1Q13505 466 aa16.75■□□□□ 0.27
INO80E-203ENST00000540562 DNAJC25Q9H1X3 360 aa16.75■□□□□ 0.27
INO80E-203ENST00000540562 CYP27B1O15528 508 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 PSMA5P28066 241 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
INO80E-203ENST00000540562 GLIPR1L2Q4G1C9 344 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 GJB4Q9NTQ9 266 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 LRRC24Q50LG9 513 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 NEK1Q96PY6 1258 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 ZMYND15Q9H091 742 aa16.74■□□□□ 0.27
INO80E-203ENST00000540562 SH2B1Q9NRF2 756 aaPredicted RBP16.74■□□□□ 0.27
INO80E-203ENST00000540562 PHKG2P15735 406 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 PUS3Q9BZE2 481 aaKnown RBP16.73■□□□□ 0.27
INO80E-203ENST00000540562 ZSCAN31Q96LW9 406 aaPredicted RBP16.73■□□□□ 0.27
INO80E-203ENST00000540562 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
INO80E-203ENST00000540562 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 ANKARQ7Z5J8 1434 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 CCDC192P0DO97 292 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 TYRO3Q06418 890 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 MAP3K11Q16584 847 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 PI16Q6UXB8 463 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 TRIM5Q9C035 493 aa16.73■□□□□ 0.27
INO80E-203ENST00000540562 HS1BP3Q53T59 392 aa16.72■□□□□ 0.27
INO80E-203ENST00000540562 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
INO80E-203ENST00000540562 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
INO80E-203ENST00000540562 KCNF1Q9H3M0 494 aa16.71■□□□□ 0.27
INO80E-203ENST00000540562 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
INO80E-203ENST00000540562 LRRC37A3O60309 1634 aa16.71■□□□□ 0.26
INO80E-203ENST00000540562 WASHC4Q2M389 1173 aa16.71■□□□□ 0.26
INO80E-203ENST00000540562 LEO1Q8WVC0 666 aaPredicted RBP16.71■□□□□ 0.26
INO80E-203ENST00000540562 ZNF592Q92610 1267 aa16.71■□□□□ 0.26
INO80E-203ENST00000540562 SLIT1O75093 1534 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 SCRN1Q12765 414 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 ISM2Q6H9L7 571 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 C16orf45Q96MC5 204 aaPredicted RBP16.7■□□□□ 0.26
INO80E-203ENST00000540562 MRVI1Q9Y6F6 885 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
INO80E-203ENST00000540562 GORABQ5T7V8 394 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
INO80E-203ENST00000540562 TUBGCP6Q96RT7 1819 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
INO80E-203ENST00000540562 ARID5BQ14865 1188 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 CSPP1Q1MSJ5 1256 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 TMEM87AQ8NBN3 555 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 RXRAP19793 462 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 CBX8Q9HC52 389 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 ZNF609O15014 1411 aa16.69■□□□□ 0.26
INO80E-203ENST00000540562 POLR3DP05423 398 aaPredicted RBP16.68■□□□□ 0.26
INO80E-203ENST00000540562 ATF3P18847 181 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
INO80E-203ENST00000540562 NFAT5O94916 1531 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 MARF1Q9Y4F3 1742 aaKnown RBP16.68■□□□□ 0.26
INO80E-203ENST00000540562 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 GPTP24298 496 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
INO80E-203ENST00000540562 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 266.2 ms