RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 ATF7IPQ6VMQ6 1270 aa27.91■■■□□ 2.06
TRIM65-202ENST00000540128 TRIM27P14373 513 aa27.9■■■□□ 2.06
TRIM65-202ENST00000540128 CSF1RP07333 972 aa27.89■■■□□ 2.06
TRIM65-202ENST00000540128 ZKSCAN2Q63HK3 967 aa27.89■■■□□ 2.06
TRIM65-202ENST00000540128 YTHDC1Q96MU7 727 aaKnown RBP27.89■■■□□ 2.06
TRIM65-202ENST00000540128 USP44Q9H0E7 712 aa27.89■■■□□ 2.06
TRIM65-202ENST00000540128 ZNF219Q9P2Y4 722 aaPredicted RBP27.89■■■□□ 2.06
TRIM65-202ENST00000540128 RTL9Q8NET4 1388 aa27.88■■■□□ 2.05
TRIM65-202ENST00000540128 GOLGB1Q14789 3259 aaKnown RBP27.88■■■□□ 2.05
TRIM65-202ENST00000540128 PPEF1O14829 653 aaPredicted RBP27.88■■■□□ 2.05
TRIM65-202ENST00000540128 GRIPAP1Q4V328 841 aa27.88■■■□□ 2.05
TRIM65-202ENST00000540128 CCDC93Q567U6 631 aa27.88■■■□□ 2.05
TRIM65-202ENST00000540128 INTS3Q68E01 1043 aaKnown RBP27.88■■■□□ 2.05
TRIM65-202ENST00000540128 TMC4Q7Z404 712 aa27.88■■■□□ 2.05
TRIM65-202ENST00000540128 FRAT1Q92837 279 aaPredicted RBP27.88■■■□□ 2.05
TRIM65-202ENST00000540128 ATP6V0A2Q9Y487 856 aa27.88■■■□□ 2.05
TRIM65-202ENST00000540128 CHD4Q14839 1912 aa27.88■■■□□ 2.05
TRIM65-202ENST00000540128 NFKBIEO00221 500 aa27.87■■■□□ 2.05
TRIM65-202ENST00000540128 NBPF7P0C2Y1 421 aaPredicted RBP27.87■■■□□ 2.05
TRIM65-202ENST00000540128 FOXO4P98177 505 aa27.87■■■□□ 2.05
TRIM65-202ENST00000540128 SP8Q8IXZ3 490 aa27.87■■■□□ 2.05
TRIM65-202ENST00000540128 RTKN2Q8IZC4 609 aa27.87■■■□□ 2.05
TRIM65-202ENST00000540128 LTBP3Q9NS15 1303 aa27.87■■■□□ 2.05
TRIM65-202ENST00000540128 RPS8P62241 208 aaKnown RBP27.86■■■□□ 2.05
TRIM65-202ENST00000540128 OLFM4Q6UX06 510 aa27.86■■■□□ 2.05
TRIM65-202ENST00000540128 CELF1Q92879 486 aaKnown RBP27.86■■■□□ 2.05
TRIM65-202ENST00000540128 RCAN3Q9UKA8 241 aa27.86■■■□□ 2.05
TRIM65-202ENST00000540128 SNED1Q8TER0 1413 aa27.85■■■□□ 2.05
TRIM65-202ENST00000540128 SEC31BQ9NQW1 1179 aa27.85■■■□□ 2.05
TRIM65-202ENST00000540128 KAZALD1Q96I82 304 aa27.84■■■□□ 2.05
TRIM65-202ENST00000540128 GREM2Q9H772 168 aa27.84■■■□□ 2.05
TRIM65-202ENST00000540128 CACNA1SQ13698 1873 aa27.83■■■□□ 2.05
TRIM65-202ENST00000540128 EPHA10Q5JZY3 1008 aa27.83■■■□□ 2.05
TRIM65-202ENST00000540128 CCDC85AQ96PX6 553 aaPredicted RBP27.83■■■□□ 2.05
TRIM65-202ENST00000540128 TAOK3Q9H2K8 898 aa27.83■■■□□ 2.05
TRIM65-202ENST00000540128 FER1L6Q2WGJ9 1857 aa27.83■■■□□ 2.04
TRIM65-202ENST00000540128 PRELPP51888 382 aa27.82■■■□□ 2.04
TRIM65-202ENST00000540128 SUCLG2Q96I99 432 aa27.82■■■□□ 2.04
TRIM65-202ENST00000540128 TNNQ9UQP3 1299 aa27.82■■■□□ 2.04
TRIM65-202ENST00000540128 MYH3P11055 1940 aa27.82■■■□□ 2.04
TRIM65-202ENST00000540128 LMNB1P20700 586 aa27.81■■■□□ 2.04
TRIM65-202ENST00000540128 FKBP4Q02790 459 aaKnown RBP eCLIP27.81■■■□□ 2.044e-6■□□□□ 11.3
TRIM65-202ENST00000540128 RASSF7Q02833 373 aa27.81■■■□□ 2.04
TRIM65-202ENST00000540128 PSMD1Q99460 953 aa27.81■■■□□ 2.04
TRIM65-202ENST00000540128 UTRNP46939 3433 aa27.81■■■□□ 2.04
TRIM65-202ENST00000540128 TAF1P21675 1872 aa27.81■■■□□ 2.04
TRIM65-202ENST00000540128 CDC5LQ99459 802 aaKnown RBP27.8■■■□□ 2.04
TRIM65-202ENST00000540128 TMX4Q9H1E5 349 aaPredicted RBP27.8■■■□□ 2.04
TRIM65-202ENST00000540128 YY1P25490 414 aa27.79■■■□□ 2.04
TRIM65-202ENST00000540128 RABL6Q3YEC7 729 aaPredicted RBP27.79■■■□□ 2.04
TRIM65-202ENST00000540128 C9orf131Q5VYM1 1079 aa27.79■■■□□ 2.04
TRIM65-202ENST00000540128 LMBR1LQ6UX01 489 aa27.79■■■□□ 2.04
TRIM65-202ENST00000540128 SLC51AQ86UW1 340 aa27.79■■■□□ 2.04
TRIM65-202ENST00000540128 ANKRD18AQ8IVF6 992 aa27.79■■■□□ 2.04
TRIM65-202ENST00000540128 CLUAP1Q96AJ1 413 aa27.79■■■□□ 2.04
TRIM65-202ENST00000540128 COL4A1P02462 1669 aa27.78■■■□□ 2.04
TRIM65-202ENST00000540128 ITGA6P23229 1130 aa27.78■■■□□ 2.04
TRIM65-202ENST00000540128 FAM161AQ3B820 660 aa27.78■■■□□ 2.04
TRIM65-202ENST00000540128 SBF1O95248 1867 aa27.78■■■□□ 2.04
TRIM65-202ENST00000540128 DZIP1LQ8IYY4 767 aaKnown RBP27.77■■■□□ 2.04
TRIM65-202ENST00000540128 RTFDC1Q9BY42 306 aaPredicted RBP27.77■■■□□ 2.04
TRIM65-202ENST00000540128 HDAC5Q9UQL6 1122 aa27.77■■■□□ 2.04
TRIM65-202ENST00000540128 TMEM57Q8N5G2 664 aa27.76■■■□□ 2.03
TRIM65-202ENST00000540128 ANKRD44Q8N8A2 993 aa27.76■■■□□ 2.03
TRIM65-202ENST00000540128 BSDC1Q9NW68 430 aaPredicted RBP27.76■■■□□ 2.03
TRIM65-202ENST00000540128 MPNDQ8N594 471 aa27.75■■■□□ 2.03
TRIM65-202ENST00000540128 BICC1Q9H694 974 aaKnown RBP27.75■■■□□ 2.03
TRIM65-202ENST00000540128 RNF181Q9P0P0 153 aa27.75■■■□□ 2.03
TRIM65-202ENST00000540128 ANKRD18BA2A2Z9 1011 aa27.74■■■□□ 2.03
TRIM65-202ENST00000540128 UBTFL1P0CB47 393 aaPredicted RBP27.74■■■□□ 2.03
TRIM65-202ENST00000540128 RLBP1P12271 317 aa27.74■■■□□ 2.03
TRIM65-202ENST00000540128 IFIT5Q13325 482 aaKnown RBP27.74■■■□□ 2.03
TRIM65-202ENST00000540128 MEIS3Q99687 375 aa27.74■■■□□ 2.03
TRIM65-202ENST00000540128 GNAI3P08754 354 aa27.73■■■□□ 2.03
TRIM65-202ENST00000540128 MS4A1P11836 297 aa27.73■■■□□ 2.03
TRIM65-202ENST00000540128 VPS33BQ9H267 617 aa27.73■■■□□ 2.03
TRIM65-202ENST00000540128 LRRC37AA6NMS7 1700 aa27.72■■■□□ 2.03
TRIM65-202ENST00000540128 ZC3H4Q9UPT8 1303 aaKnown RBP27.72■■■□□ 2.03
TRIM65-202ENST00000540128 IGHMBP2P38935 993 aaKnown RBP27.72■■■□□ 2.03
TRIM65-202ENST00000540128 DPP8Q6V1X1 898 aaPredicted RBP27.72■■■□□ 2.03
TRIM65-202ENST00000540128 FTSJ3Q8IY81 847 aaKnown RBP27.72■■■□□ 2.03
TRIM65-202ENST00000540128 ZNF277Q9NRM2 450 aaPredicted RBP27.72■■■□□ 2.03
TRIM65-202ENST00000540128 PODXL2Q9NZ53 605 aa27.72■■■□□ 2.03
TRIM65-202ENST00000540128 CCDC57Q2TAC2 916 aa27.71■■■□□ 2.03
TRIM65-202ENST00000540128 SUPT20HQ8NEM7 779 aa27.71■■■□□ 2.03
TRIM65-202ENST00000540128 CHMP3Q9Y3E7 222 aa27.71■■■□□ 2.03
TRIM65-202ENST00000540128 IARSP41252 1262 aaKnown RBP27.7■■■□□ 2.02
TRIM65-202ENST00000540128 GPSM2P81274 684 aa27.7■■■□□ 2.02
TRIM65-202ENST00000540128 MINPP1Q9UNW1 487 aa27.7■■■□□ 2.02
TRIM65-202ENST00000540128 NSFL1CQ9UNZ2 370 aaKnown RBP27.7■■■□□ 2.02
TRIM65-202ENST00000540128 MPHOSPH8Q99549 860 aa27.68■■■□□ 2.02
TRIM65-202ENST00000540128 LRRFIP2Q9Y608 721 aaKnown RBP27.68■■■□□ 2.02
TRIM65-202ENST00000540128 CCDC88AQ3V6T2 1871 aa27.68■■■□□ 2.02
TRIM65-202ENST00000540128 PANK1Q8TE04 598 aa27.67■■■□□ 2.02
TRIM65-202ENST00000540128 POLLQ9UGP5 575 aa27.67■■■□□ 2.02
TRIM65-202ENST00000540128 ZBTB7BO15156 539 aaPredicted RBP27.66■■■□□ 2.02
TRIM65-202ENST00000540128 PLIN1O60240 522 aa27.66■■■□□ 2.02
TRIM65-202ENST00000540128 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.66■■■□□ 2.02
TRIM65-202ENST00000540128 TBC1D16Q8TBP0 767 aa27.66■■■□□ 2.02
TRIM65-202ENST00000540128 DICER1Q9UPY3 1922 aaKnown RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms