RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
GNE-205ENST00000539815 VEZTQ9HBM0 779 aa9.69□□□□□ -0.86
GNE-205ENST00000539815 KIAA0100Q14667 2235 aaKnown RBP9.69□□□□□ -0.86
GNE-205ENST00000539815 KIF23Q02241 960 aaPredicted RBP9.69□□□□□ -0.86
GNE-205ENST00000539815 HOMEZQ8IX15 550 aa9.69□□□□□ -0.86
GNE-205ENST00000539815 CRAMP1Q96RY5 1269 aa9.69□□□□□ -0.86
GNE-205ENST00000539815 PSMD1Q99460 953 aa9.69□□□□□ -0.86
GNE-205ENST00000539815 IRX6P78412 446 aaPredicted RBP9.68□□□□□ -0.86
GNE-205ENST00000539815 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
GNE-205ENST00000539815 GPRC5DQ9NZD1 345 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 ZNF541Q9H0D2 1346 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 PIK3C2AO00443 1686 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 PRAMEF22A3QJZ6 481 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 CXCL9Q07325 125 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 CCDC152Q4G0S7 254 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 ANKRD18AQ8IVF6 992 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 TRIM17Q9Y577 477 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 CAMTA2O94983 1202 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 RIPK4P57078 832 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 PKN2Q16513 984 aaKnown RBP9.68□□□□□ -0.86
GNE-205ENST00000539815 DPF3Q92784 378 aa9.68□□□□□ -0.86
GNE-205ENST00000539815 ALDH1A1P00352 501 aa9.67□□□□□ -0.86
GNE-205ENST00000539815 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
GNE-205ENST00000539815 NR2E3Q9Y5X4 410 aa9.67□□□□□ -0.86
GNE-205ENST00000539815 MAP3K15Q6ZN16 1313 aa9.67□□□□□ -0.86
GNE-205ENST00000539815 ERVV-1B6SEH8 477 aa9.67□□□□□ -0.86
GNE-205ENST00000539815 PRPF38BQ5VTL8 546 aaKnown RBP9.67□□□□□ -0.86
GNE-205ENST00000539815 GGA3Q9NZ52 723 aa9.67□□□□□ -0.86
GNE-205ENST00000539815 KIAA1210Q9ULL0 1709 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 HTATSF1O43719 755 aaKnown RBP9.66□□□□□ -0.86
GNE-205ENST00000539815 COPS6Q7L5N1 327 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 SAMD7Q7Z3H4 446 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 IL17REQ8NFR9 667 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 FKTNO75072 461 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 RPS12P25398 132 aaKnown RBP9.66□□□□□ -0.86
GNE-205ENST00000539815 SUPT20HL1Q3ZLR7 823 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 OLFM4Q6UX06 510 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 THUMPD2Q9BTF0 503 aaKnown RBP9.66□□□□□ -0.86
GNE-205ENST00000539815 ANGEL1Q9UNK9 670 aaKnown RBP9.66□□□□□ -0.86
GNE-205ENST00000539815 ATP6V0A2Q9Y487 856 aa9.66□□□□□ -0.86
GNE-205ENST00000539815 PLIN1O60240 522 aa9.65□□□□□ -0.86
GNE-205ENST00000539815 USP17L8P0C7I0 530 aa9.65□□□□□ -0.86
GNE-205ENST00000539815 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
GNE-205ENST00000539815 DLGAP5Q15398 846 aa9.65□□□□□ -0.86
GNE-205ENST00000539815 MIER1Q8N108 512 aa9.65□□□□□ -0.86
GNE-205ENST00000539815 TLL2Q9Y6L7 1015 aa9.65□□□□□ -0.86
GNE-205ENST00000539815 ELL2O00472 640 aaPredicted RBP9.65□□□□□ -0.86
GNE-205ENST00000539815 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
GNE-205ENST00000539815 SP8Q8IXZ3 490 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 XAGE3Q8WTP9 111 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 VPS33BQ9H267 617 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 CSADQ9Y600 493 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 ATP5J2-PTCD1G3V325 749 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
GNE-205ENST00000539815 KCNQ3O43525 872 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 BRD2P25440 801 aaKnown RBP9.64□□□□□ -0.87
GNE-205ENST00000539815 TNNI2P48788 182 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 BCL2L12Q9HB09 334 aa9.64□□□□□ -0.87
GNE-205ENST00000539815 ANXA1P04083 346 aa9.63□□□□□ -0.87
GNE-205ENST00000539815 GRAPQ13588 217 aa9.63□□□□□ -0.87
GNE-205ENST00000539815 GRAPLQ8TC17 118 aaPredicted RBP9.63□□□□□ -0.87
GNE-205ENST00000539815 CHMP4BQ9H444 224 aaKnown RBP9.63□□□□□ -0.87
GNE-205ENST00000539815 IRS4O14654 1257 aaPredicted RBP9.63□□□□□ -0.87
GNE-205ENST00000539815 TTLL7Q6ZT98 887 aa9.63□□□□□ -0.87
GNE-205ENST00000539815 ANKRD13DQ6ZTN6 518 aa9.63□□□□□ -0.87
GNE-205ENST00000539815 ERO1AQ96HE7 468 aa9.63□□□□□ -0.87
GNE-205ENST00000539815 ITGBL1O95965 494 aaPredicted RBP9.63□□□□□ -0.87
GNE-205ENST00000539815 IREB2P48200 963 aaKnown RBP9.63□□□□□ -0.87
GNE-205ENST00000539815 F8W031 263 aaPredicted RBP9.62□□□□□ -0.87
GNE-205ENST00000539815 UBE2Q2LH0YL09 131 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 HOXD10P28358 340 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 ANGEL2Q5VTE6 544 aaKnown RBP9.62□□□□□ -0.87
GNE-205ENST00000539815 SAPCD2Q86UD0 394 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 FZD9O00144 591 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 TNFAIP1Q13829 316 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 HLFQ16534 295 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 KIAA2012Q0VF49 1180 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 SUSD4Q5VX71 490 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 DPF2Q92785 391 aa9.62□□□□□ -0.87
GNE-205ENST00000539815 NAP1L5Q96NT1 182 aaPredicted RBP9.62□□□□□ -0.87
GNE-205ENST00000539815 NAP1L2Q9ULW6 460 aaPredicted RBP9.62□□□□□ -0.87
GNE-205ENST00000539815 DBF4Q9UBU7 674 aaPredicted RBP9.61□□□□□ -0.87
GNE-205ENST00000539815 CDHR2Q9BYE9 1310 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 DOT1LQ8TEK3 1739 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 ECE2O60344 883 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 NFE2L2Q16236 605 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 HOOK2Q96ED9 719 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 RGPD3A6NKT7 1758 aaPredicted RBP9.61□□□□□ -0.87
GNE-205ENST00000539815 RGPD4Q7Z3J3 1758 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 ERBB4Q15303 1308 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 CASZ1Q86V15 1759 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 INTS3Q68E01 1043 aaKnown RBP9.61□□□□□ -0.87
GNE-205ENST00000539815 FAM89AQ96GI7 184 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 CNNM1Q9NRU3 951 aa9.61□□□□□ -0.87
GNE-205ENST00000539815 PSMD14O00487 310 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms