RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 EYA2O00167 538 aa14.45□□□□□ -0.1
VTN-202ENST00000539746 BMP2KLQ5H9B9 411 aa14.45□□□□□ -0.1
VTN-202ENST00000539746 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
VTN-202ENST00000539746 TTLL11Q8NHH1 800 aa14.45□□□□□ -0.1
VTN-202ENST00000539746 LNPKQ9C0E8 428 aa14.45□□□□□ -0.1
VTN-202ENST00000539746 OSBPL3Q9H4L5 887 aa14.45□□□□□ -0.1
VTN-202ENST00000539746 CNNM1Q9NRU3 951 aa14.45□□□□□ -0.1
VTN-202ENST00000539746 EXOC6BQ9Y2D4 811 aa14.45□□□□□ -0.1
VTN-202ENST00000539746 GYS1P13807 737 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 MX1P20591 662 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 ITGA6P23229 1130 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 PDE6BP35913 854 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 RGS3P49796 1198 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 TBC1D9BQ66K14 1250 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 LDHAL6AQ6ZMR3 332 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 ANKRD18AQ8IVF6 992 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 PROM2Q8N271 834 aa14.44□□□□□ -0.1
VTN-202ENST00000539746 MYH14Q7Z406 1995 aaKnown RBP14.43□□□□□ -0.1
VTN-202ENST00000539746 HIP1O00291 1037 aa14.43□□□□□ -0.1
VTN-202ENST00000539746 GLRX3O76003 335 aaKnown RBP14.43□□□□□ -0.1
VTN-202ENST00000539746 KCNQ4P56696 695 aa14.43□□□□□ -0.1
VTN-202ENST00000539746 EN1Q05925 392 aaPredicted RBP14.43□□□□□ -0.1
VTN-202ENST00000539746 FAM161AQ3B820 660 aa14.43□□□□□ -0.1
VTN-202ENST00000539746 BICDL1Q6ZP65 573 aa14.43□□□□□ -0.1
VTN-202ENST00000539746 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
VTN-202ENST00000539746 RBM17Q96I25 401 aaKnown RBP14.43□□□□□ -0.1
VTN-202ENST00000539746 ANKRD2Q9GZV1 360 aa14.43□□□□□ -0.1
VTN-202ENST00000539746 UBR3Q6ZT12 1888 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 IGSF3O75054 1194 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 PTPN12Q05209 780 aaKnown RBP14.42□□□□□ -0.1
VTN-202ENST00000539746 NFIXQ14938 502 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 GRIPAP1Q4V328 841 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 GORABQ5T7V8 394 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 KAZALD1Q96I82 304 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 STAP2Q9UGK3 403 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 ABCC12Q96J65 1359 aa14.42□□□□□ -0.1
VTN-202ENST00000539746 QSER1Q2KHR3 1735 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 SERPINB2P05120 415 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 TM4SF1P30408 202 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 EZH2Q15910 746 aaKnown RBP14.41□□□□□ -0.1
VTN-202ENST00000539746 RTL5Q5HYW3 569 aaPredicted RBP14.41□□□□□ -0.1
VTN-202ENST00000539746 METTL24Q5JXM2 366 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 CCDC158Q5M9N0 1113 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 IL27Q8NEV9 243 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 BRIP1Q9BX63 1249 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 ECHDC1Q9NTX5 307 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 SRP68Q9UHB9 627 aaKnown RBP14.41□□□□□ -0.1
VTN-202ENST00000539746 LAMB2P55268 1798 aa14.41□□□□□ -0.1
VTN-202ENST00000539746 APBB1O00213 710 aa14.4□□□□□ -0.1
VTN-202ENST00000539746 IFIT1P09914 478 aaKnown RBP14.4□□□□□ -0.1
VTN-202ENST00000539746 POLD1P28340 1107 aa14.4□□□□□ -0.1
VTN-202ENST00000539746 ALDH1B1P30837 517 aa14.4□□□□□ -0.1
VTN-202ENST00000539746 TMED8Q6PL24 325 aaPredicted RBP14.4□□□□□ -0.1
VTN-202ENST00000539746 AACSQ86V21 672 aa14.4□□□□□ -0.1
VTN-202ENST00000539746 CNTROBQ8N137 903 aa14.4□□□□□ -0.1
VTN-202ENST00000539746 BCL2L12Q9HB09 334 aa14.4□□□□□ -0.1
VTN-202ENST00000539746 COL24A1Q17RW2 1714 aa14.4□□□□□ -0.1
VTN-202ENST00000539746 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
VTN-202ENST00000539746 FAM177BA6PVY3 158 aa14.39□□□□□ -0.11
VTN-202ENST00000539746 BBOX1O75936 387 aa14.39□□□□□ -0.11
VTN-202ENST00000539746 SLC5A1P13866 664 aa14.39□□□□□ -0.11
VTN-202ENST00000539746 RFX5P48382 616 aaPredicted RBP14.39□□□□□ -0.11
VTN-202ENST00000539746 PUM3Q15397 648 aaKnown RBP14.39□□□□□ -0.11
VTN-202ENST00000539746 ERFEQ4G0M1 354 aa14.39□□□□□ -0.11
VTN-202ENST00000539746 SIL1Q9H173 461 aa14.39□□□□□ -0.11
VTN-202ENST00000539746 GNL3LQ9NVN8 582 aaKnown RBP14.39□□□□□ -0.11
VTN-202ENST00000539746 BSDC1Q9NW68 430 aaPredicted RBP14.39□□□□□ -0.11
VTN-202ENST00000539746 HCLS1P14317 486 aaPredicted RBP14.38□□□□□ -0.11
VTN-202ENST00000539746 PDE1AP54750 535 aa14.38□□□□□ -0.11
VTN-202ENST00000539746 ZNF827Q17R98 1081 aa14.38□□□□□ -0.11
VTN-202ENST00000539746 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
VTN-202ENST00000539746 COL23A1Q86Y22 540 aaPredicted RBP14.38□□□□□ -0.11
VTN-202ENST00000539746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.38□□□□□ -0.11
VTN-202ENST00000539746 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
VTN-202ENST00000539746 GREM2Q9H772 168 aa14.38□□□□□ -0.11
VTN-202ENST00000539746 PNPLA7Q6ZV29 1317 aa14.38□□□□□ -0.11
VTN-202ENST00000539746 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
VTN-202ENST00000539746 CDC45O75419 566 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 UQCRFS1P1P0C7P4 283 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 RPS8P62241 208 aaKnown RBP14.37□□□□□ -0.11
VTN-202ENST00000539746 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 TTC22Q5TAA0 569 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 PLEKHM2Q8IWE5 1019 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 LPIN2Q92539 896 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 CRAMP1Q96RY5 1269 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 MYH3P11055 1940 aa14.37□□□□□ -0.11
VTN-202ENST00000539746 PDE8BO95263 885 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 MMP10P09238 476 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 NPR1P16066 1061 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 KCNJ4P48050 445 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 GRAPQ13588 217 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 TTF1Q15361 905 aaPredicted RBP14.36□□□□□ -0.11
VTN-202ENST00000539746 CAVIN4Q5BKX8 364 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 PRR5LQ6MZQ0 368 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
VTN-202ENST00000539746 GRAPLQ8TC17 118 aaPredicted RBP14.36□□□□□ -0.11
VTN-202ENST00000539746 EPB41L2O43491 1005 aaKnown RBP14.35□□□□□ -0.11
VTN-202ENST00000539746 REC8O95072 547 aa14.35□□□□□ -0.11
VTN-202ENST00000539746 HOXA10P31260 410 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms