RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
USB1-203ENST00000539737 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
USB1-203ENST00000539737 ADARB2Q9NS39 739 aaKnown RBP19.62■□□□□ 0.73
USB1-203ENST00000539737 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
USB1-203ENST00000539737 XAGE3Q8WTP9 111 aa19.61■□□□□ 0.73
USB1-203ENST00000539737 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
USB1-203ENST00000539737 ZBTB12Q9Y330 459 aaPredicted RBP19.61■□□□□ 0.73
USB1-203ENST00000539737 ECE1P42892 770 aa19.6■□□□□ 0.73
USB1-203ENST00000539737 DPP8Q6V1X1 898 aaPredicted RBP19.6■□□□□ 0.73
USB1-203ENST00000539737 COPS6Q7L5N1 327 aa19.6■□□□□ 0.73
USB1-203ENST00000539737 SAPCD2Q86UD0 394 aa19.6■□□□□ 0.73
USB1-203ENST00000539737 PNNQ9H307 717 aaKnown RBP19.6■□□□□ 0.73
USB1-203ENST00000539737 MAPK8IP3Q9UPT6 1336 aa19.59■□□□□ 0.73
USB1-203ENST00000539737 EGFRP00533 1210 aa19.59■□□□□ 0.73
USB1-203ENST00000539737 SLC10A5Q5PT55 438 aa19.59■□□□□ 0.73
USB1-203ENST00000539737 CIAPIN1Q6FI81 312 aa19.59■□□□□ 0.73
USB1-203ENST00000539737 NLRP10Q86W26 655 aa19.59■□□□□ 0.73
USB1-203ENST00000539737 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
USB1-203ENST00000539737 BCL2L13Q9BXK5 485 aa19.59■□□□□ 0.73
USB1-203ENST00000539737 PARP10Q53GL7 1025 aa19.58■□□□□ 0.72
USB1-203ENST00000539737 MPNDQ8N594 471 aa19.58■□□□□ 0.72
USB1-203ENST00000539737 BEGAINQ9BUH8 593 aa19.58■□□□□ 0.72
USB1-203ENST00000539737 DDX60Q8IY21 1712 aaKnown RBP19.57■□□□□ 0.72
USB1-203ENST00000539737 RIPK4P57078 832 aa19.57■□□□□ 0.72
USB1-203ENST00000539737 KIAA2012Q0VF49 1180 aa19.57■□□□□ 0.72
USB1-203ENST00000539737 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
USB1-203ENST00000539737 SAMD7Q7Z3H4 446 aa19.57■□□□□ 0.72
USB1-203ENST00000539737 USP48Q86UV5 1035 aa19.57■□□□□ 0.72
USB1-203ENST00000539737 RTFDC1Q9BY42 306 aaPredicted RBP19.57■□□□□ 0.72
USB1-203ENST00000539737 KCNQ5Q9NR82 932 aa19.57■□□□□ 0.72
USB1-203ENST00000539737 RIMBP2O15034 1052 aa19.56■□□□□ 0.72
USB1-203ENST00000539737 CCDC146Q8IYE0 955 aa19.56■□□□□ 0.72
USB1-203ENST00000539737 MCOLN1Q9GZU1 580 aa19.56■□□□□ 0.72
USB1-203ENST00000539737 DBNDD1Q9H9R9 158 aa19.56■□□□□ 0.72
USB1-203ENST00000539737 TRMT112Q9UI30 125 aaKnown RBP19.56■□□□□ 0.72
USB1-203ENST00000539737 CNOT7Q9UIV1 285 aaKnown RBP19.56■□□□□ 0.72
USB1-203ENST00000539737 ERBB4Q15303 1308 aa19.55■□□□□ 0.72
USB1-203ENST00000539737 NEUROD2Q15784 382 aa19.55■□□□□ 0.72
USB1-203ENST00000539737 TBC1D10BQ4KMP7 808 aaPredicted RBP19.55■□□□□ 0.72
USB1-203ENST00000539737 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
USB1-203ENST00000539737 MICALL2Q8IY33 904 aa19.55■□□□□ 0.72
USB1-203ENST00000539737 CELF1Q92879 486 aaKnown RBP19.55■□□□□ 0.72
USB1-203ENST00000539737 POLR2AP24928 1970 aaKnown RBP19.55■□□□□ 0.72
USB1-203ENST00000539737 ADM5C9JUS6 153 aa19.54■□□□□ 0.72
USB1-203ENST00000539737 GRAPQ13588 217 aa19.54■□□□□ 0.72
USB1-203ENST00000539737 GRIPAP1Q4V328 841 aa19.54■□□□□ 0.72
USB1-203ENST00000539737 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
USB1-203ENST00000539737 GRAPLQ8TC17 118 aaPredicted RBP19.54■□□□□ 0.72
USB1-203ENST00000539737 TMX4Q9H1E5 349 aaPredicted RBP19.54■□□□□ 0.72
USB1-203ENST00000539737 ASTN2O75129 1339 aaPredicted RBP19.53■□□□□ 0.72
USB1-203ENST00000539737 ATP5J2-PTCD1G3V325 749 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 PSMD14O00487 310 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 ANP32CO43423 234 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 DOK7Q18PE1 504 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 RBM26Q5T8P6 1007 aaKnown RBP19.53■□□□□ 0.72
USB1-203ENST00000539737 SUPT20HQ8NEM7 779 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 CHPF2Q9P2E5 772 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 PGAP2Q9UHJ9 254 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
USB1-203ENST00000539737 LRRC37AA6NMS7 1700 aa19.53■□□□□ 0.72
USB1-203ENST00000539737 BBOX1O75936 387 aa19.52■□□□□ 0.72
USB1-203ENST00000539737 MAP2K2P36507 400 aa19.52■□□□□ 0.72
USB1-203ENST00000539737 TCIRG1Q13488 830 aa19.52■□□□□ 0.72
USB1-203ENST00000539737 SH3TC1Q8TE82 1336 aa19.51■□□□□ 0.71
USB1-203ENST00000539737 SLC34A2O95436 690 aa19.51■□□□□ 0.71
USB1-203ENST00000539737 TMPOP42166 694 aaKnown RBP19.51■□□□□ 0.71
USB1-203ENST00000539737 HUNKP57058 714 aa19.51■□□□□ 0.71
USB1-203ENST00000539737 GPSM2P81274 684 aa19.51■□□□□ 0.71
USB1-203ENST00000539737 MLLT1Q03111 559 aaPredicted RBP19.51■□□□□ 0.71
USB1-203ENST00000539737 FAM89AQ96GI7 184 aa19.51■□□□□ 0.71
USB1-203ENST00000539737 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
USB1-203ENST00000539737 RTL9Q8NET4 1388 aa19.5■□□□□ 0.71
USB1-203ENST00000539737 TNRC18O15417 2968 aaPredicted RBP19.5■□□□□ 0.71
USB1-203ENST00000539737 DGKZQ13574 1117 aa19.5■□□□□ 0.71
USB1-203ENST00000539737 POLLQ9UGP5 575 aa19.5■□□□□ 0.71
USB1-203ENST00000539737 NSFL1CQ9UNZ2 370 aaKnown RBP19.5■□□□□ 0.71
USB1-203ENST00000539737 TNIP1Q15025 636 aa19.49■□□□□ 0.71
USB1-203ENST00000539737 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
USB1-203ENST00000539737 JARID2Q92833 1246 aaPredicted RBP19.49■□□□□ 0.71
USB1-203ENST00000539737 SCAF8Q9UPN6 1271 aaKnown RBP19.49■□□□□ 0.71
USB1-203ENST00000539737 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
USB1-203ENST00000539737 WDR43Q15061 677 aaKnown RBP eCLIP19.48■□□□□ 0.71
USB1-203ENST00000539737 FAM155AB1AL88 458 aaPredicted RBP19.47■□□□□ 0.71
USB1-203ENST00000539737 C6orf229H3BNL8 230 aa19.47■□□□□ 0.71
USB1-203ENST00000539737 H7C1D1 291 aa19.47■□□□□ 0.71
USB1-203ENST00000539737 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
USB1-203ENST00000539737 ECE2O60344 883 aa19.46■□□□□ 0.71
USB1-203ENST00000539737 WASHC4Q2M389 1173 aa19.46■□□□□ 0.71
USB1-203ENST00000539737 HSP90AB3PQ58FF7 597 aa19.46■□□□□ 0.71
USB1-203ENST00000539737 KRT26Q7Z3Y9 468 aa19.46■□□□□ 0.71
USB1-203ENST00000539737 CCDC85AQ96PX6 553 aaPredicted RBP19.46■□□□□ 0.71
USB1-203ENST00000539737 SEC31BQ9NQW1 1179 aa19.46■□□□□ 0.71
USB1-203ENST00000539737 RGS19P49795 217 aa19.45■□□□□ 0.7
USB1-203ENST00000539737 ZC3H15Q8WU90 426 aaKnown RBP19.45■□□□□ 0.7
USB1-203ENST00000539737 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
USB1-203ENST00000539737 TRIM35Q9UPQ4 493 aa19.45■□□□□ 0.7
USB1-203ENST00000539737 CDHR2Q9BYE9 1310 aa19.45■□□□□ 0.7
USB1-203ENST00000539737 SOX10P56693 466 aa19.44■□□□□ 0.7
USB1-203ENST00000539737 KIF23Q02241 960 aaPredicted RBP19.44■□□□□ 0.7
USB1-203ENST00000539737 HDGFL1Q5TGJ6 251 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms