RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 POLD1P28340 1107 aa20.97■□□□□ 0.95
VPS51-216ENST00000534591 GPTP24298 496 aa20.96■□□□□ 0.95
VPS51-216ENST00000534591 PTPN12Q05209 780 aaKnown RBP20.96■□□□□ 0.95
VPS51-216ENST00000534591 ZNF652Q9Y2D9 606 aa20.96■□□□□ 0.95
VPS51-216ENST00000534591 RTCBQ9Y3I0 505 aaKnown RBP20.96■□□□□ 0.95
VPS51-216ENST00000534591 CDC45O75419 566 aa20.95■□□□□ 0.94
VPS51-216ENST00000534591 SEC24BO95487 1268 aa20.95■□□□□ 0.94
VPS51-216ENST00000534591 PARP10Q53GL7 1025 aa20.95■□□□□ 0.94
VPS51-216ENST00000534591 CLEC4GQ6UXB4 293 aa20.95■□□□□ 0.94
VPS51-216ENST00000534591 KLHL34Q8N239 644 aa20.95■□□□□ 0.94
VPS51-216ENST00000534591 ARHGEF1Q92888 912 aaKnown RBP20.95■□□□□ 0.94
VPS51-216ENST00000534591 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
VPS51-216ENST00000534591 RTL5Q5HYW3 569 aaPredicted RBP20.94■□□□□ 0.94
VPS51-216ENST00000534591 USP42Q9H9J4 1324 aaKnown RBP20.94■□□□□ 0.94
VPS51-216ENST00000534591 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
VPS51-216ENST00000534591 SASH1O94885 1247 aa20.94■□□□□ 0.94
VPS51-216ENST00000534591 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
VPS51-216ENST00000534591 KIAA1551Q9HCM1 1747 aa20.93■□□□□ 0.94
VPS51-216ENST00000534591 SDSP20132 328 aa20.93■□□□□ 0.94
VPS51-216ENST00000534591 TRAPPC3LQ5T215 181 aa20.93■□□□□ 0.94
VPS51-216ENST00000534591 TRMT112Q9UI30 125 aaKnown RBP20.93■□□□□ 0.94
VPS51-216ENST00000534591 CHMP3Q9Y3E7 222 aa20.93■□□□□ 0.94
VPS51-216ENST00000534591 TTC41PQ6P2S7 1318 aa20.93■□□□□ 0.94
VPS51-216ENST00000534591 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 CSF1RP07333 972 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 TBC1D9Q6ZT07 1266 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 NUTM1Q86Y26 1132 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 NLGN2Q8NFZ4 835 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 GPATCH3Q96I76 525 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 SIL1Q9H173 461 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 UBN2Q6ZU65 1347 aa20.92■□□□□ 0.94
VPS51-216ENST00000534591 IFIT2P09913 472 aaKnown RBP20.91■□□□□ 0.94
VPS51-216ENST00000534591 KLHDC4Q8TBB5 520 aa20.91■□□□□ 0.94
VPS51-216ENST00000534591 SRP68Q9UHB9 627 aaKnown RBP20.91■□□□□ 0.94
VPS51-216ENST00000534591 FBXO3Q9UK99 471 aa20.91■□□□□ 0.94
VPS51-216ENST00000534591 SCN7AQ01118 1682 aa20.91■□□□□ 0.94
VPS51-216ENST00000534591 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
VPS51-216ENST00000534591 HSP90B1P14625 803 aaKnown RBP20.9■□□□□ 0.94
VPS51-216ENST00000534591 CASC1Q6TDU7 716 aa20.9■□□□□ 0.94
VPS51-216ENST00000534591 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.94
VPS51-216ENST00000534591 PDE8AO60658 829 aa20.89■□□□□ 0.94
VPS51-216ENST00000534591 CIAO1O76071 339 aa20.89■□□□□ 0.94
VPS51-216ENST00000534591 GYS1P13807 737 aa20.89■□□□□ 0.94
VPS51-216ENST00000534591 ADRA2BP18089 450 aa20.89■□□□□ 0.94
VPS51-216ENST00000534591 CCDC57Q2TAC2 916 aa20.89■□□□□ 0.94
VPS51-216ENST00000534591 AACSQ86V21 672 aa20.89■□□□□ 0.94
VPS51-216ENST00000534591 UTP14AQ9BVJ6 771 aaKnown RBP20.89■□□□□ 0.94
VPS51-216ENST00000534591 SH3TC1Q8TE82 1336 aa20.89■□□□□ 0.93
VPS51-216ENST00000534591 ERC2O15083 957 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 CHD4Q14839 1912 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 GLRX3O76003 335 aaKnown RBP20.88■□□□□ 0.93
VPS51-216ENST00000534591 RFC4P35249 363 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 IL15P40933 162 aaPredicted RBP20.88■□□□□ 0.93
VPS51-216ENST00000534591 CTSWP56202 376 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 SUSD4Q5VX71 490 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 PI4K2BQ8TCG2 481 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 DDRGK1Q96HY6 314 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 TBC1D32Q96NH3 1257 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 IPO9Q96P70 1041 aaKnown RBP20.88■□□□□ 0.93
VPS51-216ENST00000534591 ECHDC1Q9NTX5 307 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 NARFQ9UHQ1 456 aa20.88■□□□□ 0.93
VPS51-216ENST00000534591 NIP7Q9Y221 180 aaKnown RBP eCLIP20.88■□□□□ 0.93
VPS51-216ENST00000534591 EYA2O00167 538 aa20.87■□□□□ 0.93
VPS51-216ENST00000534591 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
VPS51-216ENST00000534591 TSHZ3Q63HK5 1081 aa20.87■□□□□ 0.93
VPS51-216ENST00000534591 EAF2Q96CJ1 260 aaPredicted RBP20.87■□□□□ 0.93
VPS51-216ENST00000534591 MYH3P11055 1940 aa20.87■□□□□ 0.93
VPS51-216ENST00000534591 MMP10P09238 476 aa20.86■□□□□ 0.93
VPS51-216ENST00000534591 IFIT5Q13325 482 aaKnown RBP20.86■□□□□ 0.93
VPS51-216ENST00000534591 SYNE4Q8N205 404 aa20.86■□□□□ 0.93
VPS51-216ENST00000534591 TTLL11Q8NHH1 800 aa20.86■□□□□ 0.93
VPS51-216ENST00000534591 GPR108Q9NPR9 543 aa20.86■□□□□ 0.93
VPS51-216ENST00000534591 TFCP2Q12800 502 aa20.85■□□□□ 0.93
VPS51-216ENST00000534591 ATG9AQ7Z3C6 839 aa20.85■□□□□ 0.93
VPS51-216ENST00000534591 BRCA1P38398 1863 aaKnown RBP20.85■□□□□ 0.93
VPS51-216ENST00000534591 ZPR1O75312 459 aa20.84■□□□□ 0.93
VPS51-216ENST00000534591 TNNI3KQ59H18 835 aa20.84■□□□□ 0.93
VPS51-216ENST00000534591 FPGT-TNNI3KV9GXZ4 949 aa20.84■□□□□ 0.93
VPS51-216ENST00000534591 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.93
VPS51-216ENST00000534591 NTSR2O95665 410 aa20.83■□□□□ 0.93
VPS51-216ENST00000534591 C22orf23Q9BZE7 217 aa20.83■□□□□ 0.93
VPS51-216ENST00000534591 NRXN2Q9P2S2 1712 aa20.83■□□□□ 0.93
VPS51-216ENST00000534591 ANKRD18BA2A2Z9 1011 aa20.83■□□□□ 0.92
VPS51-216ENST00000534591 TAF7LQ5H9L4 462 aa20.83■□□□□ 0.92
VPS51-216ENST00000534591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.83■□□□□ 0.92
VPS51-216ENST00000534591 USPL1Q5W0Q7 1092 aa20.82■□□□□ 0.92
VPS51-216ENST00000534591 CNTROBQ8N137 903 aa20.82■□□□□ 0.92
VPS51-216ENST00000534591 RILPL2Q969X0 211 aa20.82■□□□□ 0.92
VPS51-216ENST00000534591 ZNF594Q96JF6 807 aaPredicted RBP20.82■□□□□ 0.92
VPS51-216ENST00000534591 CCDC8Q9H0W5 538 aaPredicted RBP20.82■□□□□ 0.92
VPS51-216ENST00000534591 BCL2L12Q9HB09 334 aa20.82■□□□□ 0.92
VPS51-216ENST00000534591 ITGA6P23229 1130 aa20.81■□□□□ 0.92
VPS51-216ENST00000534591 NLGN1Q8N2Q7 840 aa20.81■□□□□ 0.92
VPS51-216ENST00000534591 GREM2Q9H772 168 aa20.81■□□□□ 0.92
VPS51-216ENST00000534591 CEP126Q9P2H0 1117 aa20.81■□□□□ 0.92
VPS51-216ENST00000534591 LAMB2P55268 1798 aa20.81■□□□□ 0.92
VPS51-216ENST00000534591 C10orf71Q711Q0 1435 aa20.8■□□□□ 0.92
VPS51-216ENST00000534591 RBM25P49756 843 aaKnown RBP20.8■□□□□ 0.92
VPS51-216ENST00000534591 DDR1Q08345 913 aa20.8■□□□□ 0.92
VPS51-216ENST00000534591 LRRC24Q50LG9 513 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms