RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 C16orf71Q8IYS4 520 aaPredicted RBP13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 PREX2Q70Z35 1606 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 TAOK3Q9H2K8 898 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 DBF4Q9UBU7 674 aaPredicted RBP13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 FGFR1OPO95684 399 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 CNNM3Q8NE01 707 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 RASSF4Q9H2L5 321 aa13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 PHAXQ9H814 394 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-212ENST00000534300 PZPP20742 1482 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 GSTTP1A0A1W2PQM5 241 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 APBA3O96018 575 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 TTC31Q49AM3 519 aaPredicted RBP13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 CPLX3Q8WVH0 158 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 EBAG9O00559 213 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 NBPF6Q5VWK0 638 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 NBPF5PQ86XG9 351 aaPredicted RBP13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 DCAF5Q96JK2 942 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 NBPF4Q96M43 638 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 MCM10Q7L590 875 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 MCM6Q14566 821 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 SPATA24Q86W54 205 aa13.92□□□□□ -0.18
AMBRA1-212ENST00000534300 ARHGEF12Q9NZN5 1544 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 PPP1R12BO60237 982 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CKAP4Q07065 602 aaKnown RBP13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CCDC178Q5BJE1 867 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 ZNF830Q96NB3 372 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 TUBBP07437 444 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 DUSP27Q5VZP5 1158 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 TFIP11Q9UBB9 837 aaKnown RBP13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 DNAI1Q9UI46 699 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 ADCY10Q96PN6 1610 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 HSF2BPO75031 334 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 MAATS1Q7Z4T9 603 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 NUTM1Q86Y26 1132 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CCDC196A0A1B0GTZ2 297 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 CDC5LQ99459 802 aaKnown RBP13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 ANKIB1Q9P2G1 1089 aa13.91□□□□□ -0.18
AMBRA1-212ENST00000534300 PLEKHG3A1L390 1219 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 FLAD1Q8NFF5 587 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 SNX21Q969T3 373 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 TTC12Q9H892 705 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 FKBP4Q02790 459 aaKnown RBP eCLIP13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 GIMAP6Q6P9H5 292 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 CCNL1Q9UK58 526 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 V9GYY5 206 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 TERF1P54274 439 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 C6orf163Q5TEZ5 329 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 STAMBPO95630 424 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 GOPCQ9HD26 462 aa13.9□□□□□ -0.18
AMBRA1-212ENST00000534300 OPA1O60313 960 aa13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 NYXQ9GZU5 481 aa13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 GJB2P29033 226 aa13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 IFIT1P09914 478 aaKnown RBP13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 FBF1Q8TES7 1133 aa13.89□□□□□ -0.19
AMBRA1-212ENST00000534300 POTEJP0CG39 1038 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 TDRD12Q587J7 1177 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 TSG101Q99816 390 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 TMX1Q9H3N1 280 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 TDO2P48775 406 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 FAM196AQ6ZSG2 479 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 OTUD6BQ8N6M0 293 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 ZSCAN16Q9H4T2 348 aaPredicted RBP13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 BIN1O00499 593 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 ZSCAN22P10073 491 aaPredicted RBP13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 DESP17661 470 aa13.88□□□□□ -0.19
AMBRA1-212ENST00000534300 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 UBE4AQ14139 1066 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 KANK3Q6NY19 840 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 KDM5CP41229 1560 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 C6orf229H3BNL8 230 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 SLF2Q8IX21 1173 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 C10orf67Q8IYJ2 551 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 ATRIPQ8WXE1 791 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 COL17A1Q9UMD9 1497 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 HOXC9P31274 260 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms