RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 NEUROD6Q96NK8 337 aa34.31■■■■□ 3.08
SAMD1-202ENST00000533683 IL6STP40189 918 aaPredicted RBP34.3■■■■□ 3.08
SAMD1-202ENST00000533683 TIMM10P62072 90 aa34.3■■■■□ 3.08
SAMD1-202ENST00000533683 PRPF40BQ6NWY9 871 aaKnown RBP34.3■■■■□ 3.08
SAMD1-202ENST00000533683 BARGINQ6ZT62 677 aa34.3■■■■□ 3.08
SAMD1-202ENST00000533683 NECTIN1Q15223 517 aa34.3■■■■□ 3.08
SAMD1-202ENST00000533683 MAP4K1Q92918 833 aa34.3■■■■□ 3.08
SAMD1-202ENST00000533683 A0A0G2JS52 829 aa34.29■■■■□ 3.08
SAMD1-202ENST00000533683 CSF1RP07333 972 aa34.29■■■■□ 3.08
SAMD1-202ENST00000533683 SYNE4Q8N205 404 aa34.29■■■■□ 3.08
SAMD1-202ENST00000533683 TTC14Q96N46 770 aa34.29■■■■□ 3.08
SAMD1-202ENST00000533683 DNAJC2Q99543 621 aaKnown RBP34.29■■■■□ 3.08
SAMD1-202ENST00000533683 MED23Q9ULK4 1368 aa34.29■■■■□ 3.08
SAMD1-202ENST00000533683 ANKRD36CQ5JPF3 1778 aa34.28■■■■□ 3.08
SAMD1-202ENST00000533683 INTS4Q96HW7 963 aaKnown RBP34.28■■■■□ 3.08
SAMD1-202ENST00000533683 RBM8AQ9Y5S9 174 aaKnown RBP34.28■■■■□ 3.08
SAMD1-202ENST00000533683 CDHR2Q9BYE9 1310 aa34.27■■■■□ 3.08
SAMD1-202ENST00000533683 ZNF609O15014 1411 aa34.27■■■■□ 3.08
SAMD1-202ENST00000533683 DZIP3Q86Y13 1208 aaKnown RBP34.27■■■■□ 3.08
SAMD1-202ENST00000533683 CCDC85AQ96PX6 553 aaPredicted RBP34.27■■■■□ 3.08
SAMD1-202ENST00000533683 TBC1D2BQ9UPU7 963 aa34.27■■■■□ 3.08
SAMD1-202ENST00000533683 NUP98P52948 1817 aa34.27■■■■□ 3.08
SAMD1-202ENST00000533683 ERVV-1B6SEH8 477 aa34.26■■■■□ 3.08
SAMD1-202ENST00000533683 BAG4O95429 457 aaKnown RBP34.25■■■■□ 3.07
SAMD1-202ENST00000533683 ZNF589Q86UQ0 364 aaPredicted RBP34.25■■■■□ 3.07
SAMD1-202ENST00000533683 FBXO3Q9UK99 471 aa34.25■■■■□ 3.07
SAMD1-202ENST00000533683 RFX7Q2KHR2 1363 aa34.25■■■■□ 3.07
SAMD1-202ENST00000533683 CASTP20810 708 aaKnown RBP34.25■■■■□ 3.07
SAMD1-202ENST00000533683 A0A1B0GUL7 405 aa34.24■■■■□ 3.07
SAMD1-202ENST00000533683 ADCK5Q3MIX3 580 aa34.24■■■■□ 3.07
SAMD1-202ENST00000533683 CEP126Q9P2H0 1117 aa34.24■■■■□ 3.07
SAMD1-202ENST00000533683 ZDHHC9Q9Y397 364 aa34.24■■■■□ 3.07
SAMD1-202ENST00000533683 CREB3L3Q68CJ9 461 aa34.23■■■■□ 3.07
SAMD1-202ENST00000533683 KCNJ4P48050 445 aa34.23■■■■□ 3.07
SAMD1-202ENST00000533683 IFIT5Q13325 482 aaKnown RBP34.23■■■■□ 3.07
SAMD1-202ENST00000533683 INTS5Q6P9B9 1019 aaKnown RBP34.23■■■■□ 3.07
SAMD1-202ENST00000533683 DDX46Q7L014 1031 aaKnown RBP34.23■■■■□ 3.07
SAMD1-202ENST00000533683 ATP6V1AP38606 617 aa34.22■■■■□ 3.07
SAMD1-202ENST00000533683 AK2P54819 239 aa34.22■■■■□ 3.07
SAMD1-202ENST00000533683 EIF5P55010 431 aaKnown RBP34.22■■■■□ 3.07
SAMD1-202ENST00000533683 JAKMIP1Q96N16 626 aaKnown RBP34.22■■■■□ 3.07
SAMD1-202ENST00000533683 TM6SF1Q9BZW5 370 aa34.22■■■■□ 3.07
SAMD1-202ENST00000533683 CPA1P15085 419 aa34.22■■■■□ 3.07
SAMD1-202ENST00000533683 JCADQ9P266 1359 aa34.21■■■■□ 3.07
SAMD1-202ENST00000533683 LOC102724428A0A0B4J2F2 783 aa34.21■■■■□ 3.07
SAMD1-202ENST00000533683 ZKSCAN1P17029 563 aaPredicted RBP34.21■■■■□ 3.07
SAMD1-202ENST00000533683 SIK1P57059 783 aa34.21■■■■□ 3.07
SAMD1-202ENST00000533683 CCDC87Q9NVE4 849 aa34.21■■■■□ 3.07
SAMD1-202ENST00000533683 KBTBD3Q8NAB2 608 aa34.21■■■■□ 3.07
SAMD1-202ENST00000533683 TTLL11Q8NHH1 800 aa34.21■■■■□ 3.07
SAMD1-202ENST00000533683 ZSWIM6Q9HCJ5 1215 aa34.21■■■■□ 3.07
SAMD1-202ENST00000533683 TRMT112Q9UI30 125 aaKnown RBP34.21■■■■□ 3.07
SAMD1-202ENST00000533683 PTMSP20962 102 aa34.2■■■■□ 3.07
SAMD1-202ENST00000533683 TAF7LQ5H9L4 462 aa34.2■■■■□ 3.07
SAMD1-202ENST00000533683 GZF1Q9H116 711 aaPredicted RBP34.2■■■■□ 3.07
SAMD1-202ENST00000533683 TAF5LO75529 589 aa34.19■■■■□ 3.06
SAMD1-202ENST00000533683 CHGBP05060 677 aa34.19■■■■□ 3.06
SAMD1-202ENST00000533683 CRKLP46109 303 aaKnown RBP34.19■■■■□ 3.06
SAMD1-202ENST00000533683 RUFY3Q7L099 469 aa34.19■■■■□ 3.06
SAMD1-202ENST00000533683 UBAP1LF5GYI3 381 aa34.19■■■■□ 3.06
SAMD1-202ENST00000533683 SLC27A2O14975 620 aa34.19■■■■□ 3.06
SAMD1-202ENST00000533683 ZNF34Q8IZ26 560 aa34.19■■■■□ 3.06
SAMD1-202ENST00000533683 UBN2Q6ZU65 1347 aa34.18■■■■□ 3.06
SAMD1-202ENST00000533683 IRS4O14654 1257 aaPredicted RBP34.18■■■■□ 3.06
SAMD1-202ENST00000533683 PAG1Q9NWQ8 432 aa34.18■■■■□ 3.06
SAMD1-202ENST00000533683 CTSWP56202 376 aa34.18■■■■□ 3.06
SAMD1-202ENST00000533683 GREM2Q9H772 168 aa34.18■■■■□ 3.06
SAMD1-202ENST00000533683 LIMCH1Q9UPQ0 1083 aa34.18■■■■□ 3.06
SAMD1-202ENST00000533683 GOLGA6L22H0YM25 854 aa34.17■■■■□ 3.06
SAMD1-202ENST00000533683 GOLIM4O00461 696 aa34.17■■■■□ 3.06
SAMD1-202ENST00000533683 ITPK1Q13572 414 aa34.17■■■■□ 3.06
SAMD1-202ENST00000533683 CYP46A1Q9Y6A2 500 aa34.17■■■■□ 3.06
SAMD1-202ENST00000533683 VPS53Q5VIR6 699 aa34.16■■■■□ 3.06
SAMD1-202ENST00000533683 AKAP2Q9Y2D5 859 aa34.16■■■■□ 3.06
SAMD1-202ENST00000533683 MYH3P11055 1940 aa34.16■■■■□ 3.06
SAMD1-202ENST00000533683 ITGA6P23229 1130 aa34.16■■■■□ 3.06
SAMD1-202ENST00000533683 PALLDQ8WX93 1383 aa34.16■■■■□ 3.06
SAMD1-202ENST00000533683 FAM98CQ17RN3 349 aaKnown RBP34.15■■■■□ 3.06
SAMD1-202ENST00000533683 SEC62Q99442 399 aaKnown RBP34.15■■■■□ 3.06
SAMD1-202ENST00000533683 LARP6Q9BRS8 491 aaKnown RBP34.15■■■■□ 3.06
SAMD1-202ENST00000533683 PDRG1Q9NUG6 133 aa34.15■■■■□ 3.06
SAMD1-202ENST00000533683 KCNQ2O43526 872 aa34.15■■■■□ 3.06
SAMD1-202ENST00000533683 IFIT1P09914 478 aaKnown RBP34.15■■■■□ 3.06
SAMD1-202ENST00000533683 SKOR2Q2VWA4 1001 aaPredicted RBP34.15■■■■□ 3.06
SAMD1-202ENST00000533683 MCMDC2Q4G0Z9 681 aa34.14■■■■□ 3.06
SAMD1-202ENST00000533683 RNF20Q5VTR2 975 aa34.14■■■■□ 3.06
SAMD1-202ENST00000533683 C8orf37Q96NL8 207 aa34.14■■■■□ 3.06
SAMD1-202ENST00000533683 RPAP1Q9BWH6 1393 aaPredicted RBP34.14■■■■□ 3.06
SAMD1-202ENST00000533683 USPL1Q5W0Q7 1092 aa34.13■■■■□ 3.05
SAMD1-202ENST00000533683 NGLY1Q96IV0 654 aa34.13■■■■□ 3.05
SAMD1-202ENST00000533683 RIPOR2Q9Y4F9 1068 aa34.13■■■■□ 3.05
SAMD1-202ENST00000533683 PDE8AO60658 829 aa34.12■■■■□ 3.05
SAMD1-202ENST00000533683 ADORA1P30542 326 aa34.12■■■■□ 3.05
SAMD1-202ENST00000533683 CCDC129Q6ZRS4 1044 aa34.12■■■■□ 3.05
SAMD1-202ENST00000533683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP34.12■■■■□ 3.05
SAMD1-202ENST00000533683 XAGE2Q96GT9 111 aa34.12■■■■□ 3.05
SAMD1-202ENST00000533683 BCL9LQ86UU0 1499 aa34.12■■■■□ 3.05
SAMD1-202ENST00000533683 RREB1Q92766 1687 aa34.12■■■■□ 3.05
SAMD1-202ENST00000533683 MYH14Q7Z406 1995 aaKnown RBP34.12■■■■□ 3.05
SAMD1-202ENST00000533683 MCTP1Q6DN14 999 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms