RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ZBTB43O43298 467 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 BAG3O95817 575 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 AK2P54819 239 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 TRMT1Q9NXH9 659 aaKnown RBP20.3■□□□□ 0.84
PHRF1-205ENST00000533464 RAB34Q9BZG1 259 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 ZMYM4Q5VZL5 1548 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 RDXP35241 583 aaKnown RBP20.3■□□□□ 0.84
PHRF1-205ENST00000533464 DNM1Q05193 864 aaKnown RBP20.3■□□□□ 0.84
PHRF1-205ENST00000533464 WTAPQ15007 396 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 ZNF397Q8NF99 534 aaPredicted RBP20.3■□□□□ 0.84
PHRF1-205ENST00000533464 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
PHRF1-205ENST00000533464 F13A1P00488 732 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 XRCC6P12956 609 aaKnown RBP eCLIP20.3■□□□□ 0.84
PHRF1-205ENST00000533464 CCDC102BQ68D86 513 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 CYP7A1P22680 504 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 TFCP2Q12800 502 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
PHRF1-205ENST00000533464 RAB3GAP1Q15042 981 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 CPLX3Q8WVH0 158 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 RFC4P35249 363 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 PDCL2Q8N4E4 241 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 KAT14Q9H8E8 782 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 C16orf45Q96MC5 204 aaPredicted RBP20.29■□□□□ 0.84
PHRF1-205ENST00000533464 CWC15Q9P013 229 aaKnown RBP20.29■□□□□ 0.84
PHRF1-205ENST00000533464 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 CAVIN2O95810 425 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 RBM25P49756 843 aaKnown RBP20.29■□□□□ 0.84
PHRF1-205ENST00000533464 CREB3L3Q68CJ9 461 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 VAT1LQ9HCJ6 419 aa20.29■□□□□ 0.84
PHRF1-205ENST00000533464 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
PHRF1-205ENST00000533464 ALG1Q9BT22 464 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 SPATA31E1Q6ZUB1 1445 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 URI1O94763 535 aaPredicted RBP20.28■□□□□ 0.84
PHRF1-205ENST00000533464 TNNT1P13805 278 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 SPTY2D1Q68D10 685 aaPredicted RBP20.28■□□□□ 0.84
PHRF1-205ENST00000533464 CNKSR2Q8WXI2 1034 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
PHRF1-205ENST00000533464 SLC4A4Q9Y6R1 1079 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 TMEM266Q2M3C6 531 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 FKBP15Q5T1M5 1219 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 TMC6Q7Z403 805 aa20.28■□□□□ 0.84
PHRF1-205ENST00000533464 SIRT1Q96EB6 747 aa20.27■□□□□ 0.84
PHRF1-205ENST00000533464 CRNKL1Q9BZJ0 848 aaKnown RBP20.27■□□□□ 0.84
PHRF1-205ENST00000533464 KRT23Q9C075 422 aa20.27■□□□□ 0.84
PHRF1-205ENST00000533464 STX8Q9UNK0 236 aa20.27■□□□□ 0.84
PHRF1-205ENST00000533464 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
PHRF1-205ENST00000533464 ERLIN2O94905 339 aa20.27■□□□□ 0.84
PHRF1-205ENST00000533464 DACT1Q9NYF0 836 aa20.27■□□□□ 0.84
PHRF1-205ENST00000533464 LEKR1Q6ZMV7 388 aa20.27■□□□□ 0.83
PHRF1-205ENST00000533464 CCDC66A2RUB6 948 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 NEMFO60524 1076 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 DDB1Q16531 1140 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
PHRF1-205ENST00000533464 EIF3JO75822 258 aaKnown RBP20.26■□□□□ 0.83
PHRF1-205ENST00000533464 UBA7P41226 1012 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 LGR6Q9HBX8 967 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 SYKP43405 635 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 GSDMDP57764 484 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 SPA17Q15506 151 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 IQCEQ6IPM2 695 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 CHST3Q7LGC8 479 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 HELBQ8NG08 1087 aaPredicted RBP20.26■□□□□ 0.83
PHRF1-205ENST00000533464 ORAI2Q96SN7 254 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 TCP11L1Q9NUJ3 509 aa20.26■□□□□ 0.83
PHRF1-205ENST00000533464 BLMP54132 1417 aaPredicted RBP20.25■□□□□ 0.83
PHRF1-205ENST00000533464 WWC2Q6AWC2 1192 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 ESR2Q92731 530 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 PRC1O43663 620 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 HSPA2P54652 639 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 BABAM1Q9NWV8 329 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 RNF113AO15541 343 aaKnown RBP20.25■□□□□ 0.83
PHRF1-205ENST00000533464 KIF5CO60282 957 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 H0YHG0 523 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 PPP1R12BO60237 982 aaPredicted RBP20.25■□□□□ 0.83
PHRF1-205ENST00000533464 TMTC2Q8N394 836 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 CCDC12Q8WUD4 166 aaPredicted RBP20.25■□□□□ 0.83
PHRF1-205ENST00000533464 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 CNNM2Q9H8M5 875 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 ATP10AO60312 1499 aa20.25■□□□□ 0.83
PHRF1-205ENST00000533464 GOLGA6L10A6NI86 522 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 KIF4BQ2VIQ3 1234 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 TSG101Q99816 390 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 INSRP06213 1382 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 CACNA2D4Q7Z3S7 1137 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 KCNG4Q8TDN1 519 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.24■□□□□ 0.831e-6■■■■■ 71
PHRF1-205ENST00000533464 INTS4Q96HW7 963 aaKnown RBP20.24■□□□□ 0.83
PHRF1-205ENST00000533464 NUP88Q99567 741 aaPredicted RBP20.24■□□□□ 0.83
PHRF1-205ENST00000533464 UBA5Q9GZZ9 404 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 IRS4O14654 1257 aaPredicted RBP20.24■□□□□ 0.83
PHRF1-205ENST00000533464 RTN1Q16799 776 aa20.24■□□□□ 0.83
PHRF1-205ENST00000533464 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
PHRF1-205ENST00000533464 RRP9O43818 475 aaKnown RBP20.23■□□□□ 0.83
PHRF1-205ENST00000533464 IDEP14735 1019 aa20.23■□□□□ 0.83
PHRF1-205ENST00000533464 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms