RNA–Protein interactions for RNA: ENST00000533164.5

DDX20-204, Transcript of DEAD-box helicase 20, human

TSL 5

Gene DDX20, Length 1,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX20-204	ENST00000533164	DDX46	Q7L014	1031 aa	Known RBP	28.02	■■■□□ 2.08
DDX20-204	ENST00000533164	UTY	O14607	1347 aa		28.01	■■■□□ 2.08
DDX20-204	ENST00000533164	CTSW	P56202	376 aa		28.01	■■■□□ 2.07
DDX20-204	ENST00000533164	RTL9	Q8NET4	1388 aa		27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	NFKBIE	O00221	500 aa		27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	IPO8	O15397	1037 aa	Known RBP	27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	GRAP	Q13588	217 aa		27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	TTLL11	Q8NHH1	800 aa		27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	GRAPL	Q8TC17	118 aa	Predicted RBP	27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	ZNF219	Q9P2Y4	722 aa	Predicted RBP	27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	DICER1	Q9UPY3	1922 aa	Known RBP	27.99	■■■□□ 2.07
DDX20-204	ENST00000533164	LTBP3	Q9NS15	1303 aa		27.98	■■■□□ 2.07
DDX20-204	ENST00000533164	PPEF1	O14829	653 aa	Predicted RBP	27.98	■■■□□ 2.07
DDX20-204	ENST00000533164	BBOX1	O75936	387 aa		27.98	■■■□□ 2.07
DDX20-204	ENST00000533164	CCDC152	Q4G0S7	254 aa		27.98	■■■□□ 2.07
DDX20-204	ENST00000533164	TRIM27	P14373	513 aa		27.97	■■■□□ 2.07
DDX20-204	ENST00000533164	CCT4	P50991	539 aa	Known RBP	27.97	■■■□□ 2.07
DDX20-204	ENST00000533164	CCDC93	Q567U6	631 aa		27.97	■■■□□ 2.07
DDX20-204	ENST00000533164	CC2D2B	Q6DHV5	1058 aa		27.97	■■■□□ 2.07
DDX20-204	ENST00000533164	ATF7IP	Q6VMQ6	1270 aa		27.97	■■■□□ 2.07
DDX20-204	ENST00000533164	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.97	■■■□□ 2.07
DDX20-204	ENST00000533164	CSF1R	P07333	972 aa		27.96	■■■□□ 2.07
DDX20-204	ENST00000533164	OLFM4	Q6UX06	510 aa		27.96	■■■□□ 2.07
DDX20-204	ENST00000533164	CELF1	Q92879	486 aa	Known RBP	27.96	■■■□□ 2.07
DDX20-204	ENST00000533164	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.95	■■■□□ 2.07
DDX20-204	ENST00000533164	USP44	Q9H0E7	712 aa		27.95	■■■□□ 2.07
DDX20-204	ENST00000533164	ATP6V0A2	Q9Y487	856 aa		27.95	■■■□□ 2.07
DDX20-204	ENST00000533164	PRELP	P51888	382 aa		27.95	■■■□□ 2.06
DDX20-204	ENST00000533164	FOXO4	P98177	505 aa		27.95	■■■□□ 2.06
DDX20-204	ENST00000533164	RASSF7	Q02833	373 aa		27.95	■■■□□ 2.06
DDX20-204	ENST00000533164	FRAT1	Q92837	279 aa	Predicted RBP	27.95	■■■□□ 2.06
DDX20-204	ENST00000533164	YTHDC1	Q96MU7	727 aa	Known RBP	27.95	■■■□□ 2.06
DDX20-204	ENST00000533164	SEC31B	Q9NQW1	1179 aa		27.95	■■■□□ 2.06
DDX20-204	ENST00000533164	ZKSCAN2	Q63HK3	967 aa		27.94	■■■□□ 2.06
DDX20-204	ENST00000533164	INTS3	Q68E01	1043 aa	Known RBP	27.94	■■■□□ 2.06
DDX20-204	ENST00000533164	TMC4	Q7Z404	712 aa		27.94	■■■□□ 2.06
DDX20-204	ENST00000533164	SLC51A	Q86UW1	340 aa		27.94	■■■□□ 2.06
DDX20-204	ENST00000533164	SPEF2	Q9C093	1822 aa		27.94	■■■□□ 2.06
DDX20-204	ENST00000533164	GRIPAP1	Q4V328	841 aa		27.93	■■■□□ 2.06
DDX20-204	ENST00000533164	SP8	Q8IXZ3	490 aa		27.93	■■■□□ 2.06
DDX20-204	ENST00000533164	RTKN2	Q8IZC4	609 aa		27.93	■■■□□ 2.06
DDX20-204	ENST00000533164	KAZALD1	Q96I82	304 aa		27.93	■■■□□ 2.06
DDX20-204	ENST00000533164	TNN	Q9UQP3	1299 aa		27.93	■■■□□ 2.06
DDX20-204	ENST00000533164	LTBP1	Q14766	1721 aa		27.93	■■■□□ 2.06
DDX20-204	ENST00000533164	TAOK3	Q9H2K8	898 aa		27.92	■■■□□ 2.06
DDX20-204	ENST00000533164	GREM2	Q9H772	168 aa		27.92	■■■□□ 2.06
DDX20-204	ENST00000533164	RPS8	P62241	208 aa	Known RBP	27.91	■■■□□ 2.06
DDX20-204	ENST00000533164	EPHA10	Q5JZY3	1008 aa		27.91	■■■□□ 2.06
DDX20-204	ENST00000533164	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.91	■■■□□ 2.06
DDX20-204	ENST00000533164	TIAM2	Q8IVF5	1701 aa		27.91	■■■□□ 2.06
DDX20-204	ENST00000533164	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.9	■■■□□ 2.06
DDX20-204	ENST00000533164	PSMD1	Q99460	953 aa		27.9	■■■□□ 2.06
DDX20-204	ENST00000533164	RCAN3	Q9UKA8	241 aa		27.9	■■■□□ 2.06
DDX20-204	ENST00000533164	LMNB1	P20700	586 aa		27.89	■■■□□ 2.06
DDX20-204	ENST00000533164	YY1	P25490	414 aa		27.89	■■■□□ 2.06
DDX20-204	ENST00000533164	SUCLG2	Q96I99	432 aa		27.89	■■■□□ 2.06
DDX20-204	ENST00000533164	DUOX1	Q9NRD9	1551 aa		27.89	■■■□□ 2.05
DDX20-204	ENST00000533164	FAM161A	Q3B820	660 aa		27.88	■■■□□ 2.05
DDX20-204	ENST00000533164	C9orf131	Q5VYM1	1079 aa		27.88	■■■□□ 2.05
DDX20-204	ENST00000533164	CDC5L	Q99459	802 aa	Known RBP	27.88	■■■□□ 2.05
DDX20-204	ENST00000533164	RABL6	Q3YEC7	729 aa	Predicted RBP	27.87	■■■□□ 2.05
DDX20-204	ENST00000533164	ITGA6	P23229	1130 aa		27.86	■■■□□ 2.05
DDX20-204	ENST00000533164	LMBR1L	Q6UX01	489 aa		27.86	■■■□□ 2.05
DDX20-204	ENST00000533164	CLUAP1	Q96AJ1	413 aa		27.86	■■■□□ 2.05
DDX20-204	ENST00000533164	RNF181	Q9P0P0	153 aa		27.86	■■■□□ 2.05
DDX20-204	ENST00000533164	ANKRD18A	Q8IVF6	992 aa		27.85	■■■□□ 2.05
DDX20-204	ENST00000533164	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.85	■■■□□ 2.05
DDX20-204	ENST00000533164	TMX4	Q9H1E5	349 aa	Predicted RBP	27.85	■■■□□ 2.05
DDX20-204	ENST00000533164	BICC1	Q9H694	974 aa	Known RBP	27.84	■■■□□ 2.05
DDX20-204	ENST00000533164		A0A1B0GUL6	1792 aa		27.84	■■■□□ 2.05
DDX20-204	ENST00000533164	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.83	■■■□□ 2.05
DDX20-204	ENST00000533164	TMEM57	Q8N5G2	664 aa		27.83	■■■□□ 2.04
DDX20-204	ENST00000533164	ANKRD44	Q8N8A2	993 aa		27.83	■■■□□ 2.04
DDX20-204	ENST00000533164	MEIS3	Q99687	375 aa		27.83	■■■□□ 2.04
DDX20-204	ENST00000533164	BSDC1	Q9NW68	430 aa	Predicted RBP	27.83	■■■□□ 2.04
DDX20-204	ENST00000533164	RLBP1	P12271	317 aa		27.82	■■■□□ 2.04
DDX20-204	ENST00000533164	DZIP1L	Q8IYY4	767 aa	Known RBP	27.82	■■■□□ 2.04
DDX20-204	ENST00000533164	MPND	Q8N594	471 aa		27.82	■■■□□ 2.04
DDX20-204	ENST00000533164	ANKRD18B	A2A2Z9	1011 aa		27.81	■■■□□ 2.04
DDX20-204	ENST00000533164	UBTFL1	P0CB47	393 aa	Predicted RBP	27.81	■■■□□ 2.04
DDX20-204	ENST00000533164	IFIT5	Q13325	482 aa	Known RBP	27.81	■■■□□ 2.04
DDX20-204	ENST00000533164	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.81	■■■□□ 2.04
DDX20-204	ENST00000533164	COL4A5	P29400	1685 aa		27.8	■■■□□ 2.04
DDX20-204	ENST00000533164	DPP8	Q6V1X1	898 aa	Predicted RBP	27.8	■■■□□ 2.04
DDX20-204	ENST00000533164	PODXL2	Q9NZ53	605 aa		27.8	■■■□□ 2.04
DDX20-204	ENST00000533164	IARS	P41252	1262 aa	Known RBP	27.79	■■■□□ 2.04
DDX20-204	ENST00000533164	VPS33B	Q9H267	617 aa		27.79	■■■□□ 2.04
DDX20-204	ENST00000533164	IGHMBP2	P38935	993 aa	Known RBP	27.78	■■■□□ 2.04
DDX20-204	ENST00000533164	GPSM2	P81274	684 aa		27.78	■■■□□ 2.04
DDX20-204	ENST00000533164	FTSJ3	Q8IY81	847 aa	Known RBP	27.78	■■■□□ 2.04
DDX20-204	ENST00000533164	CHMP3	Q9Y3E7	222 aa		27.78	■■■□□ 2.04
DDX20-204	ENST00000533164	GNAI3	P08754	354 aa		27.77	■■■□□ 2.04
DDX20-204	ENST00000533164	CCDC57	Q2TAC2	916 aa		27.77	■■■□□ 2.04
DDX20-204	ENST00000533164	SUPT20H	Q8NEM7	779 aa		27.77	■■■□□ 2.04
DDX20-204	ENST00000533164	MINPP1	Q9UNW1	487 aa		27.77	■■■□□ 2.04
DDX20-204	ENST00000533164	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.76	■■■□□ 2.04
DDX20-204	ENST00000533164	HDAC5	Q9UQL6	1122 aa		27.76	■■■□□ 2.04
DDX20-204	ENST00000533164	MS4A1	P11836	297 aa		27.75	■■■□□ 2.03
DDX20-204	ENST00000533164	ZNF784	Q8NCA9	323 aa	Predicted RBP	27.75	■■■□□ 2.03
DDX20-204	ENST00000533164	MPHOSPH8	Q99549	860 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms