RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 KIAA2012Q0VF49 1180 aa8.12□□□□□ -1.11
BDNF-217ENST00000533131 NFX1Q12986 1120 aaKnown RBP8.12□□□□□ -1.11
BDNF-217ENST00000533131 NUTM1Q86Y26 1132 aa8.12□□□□□ -1.11
BDNF-217ENST00000533131 ZNF830Q96NB3 372 aaPredicted RBP8.12□□□□□ -1.11
BDNF-217ENST00000533131 DAPK1P53355 1430 aa8.12□□□□□ -1.11
BDNF-217ENST00000533131 IFRD1O00458 451 aaPredicted RBP8.12□□□□□ -1.11
BDNF-217ENST00000533131 ALDH1L1O75891 902 aa8.12□□□□□ -1.11
BDNF-217ENST00000533131 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
BDNF-217ENST00000533131 ASB16Q96NS5 453 aa8.12□□□□□ -1.11
BDNF-217ENST00000533131 CYLDQ9NQC7 956 aa8.12□□□□□ -1.11
BDNF-217ENST00000533131 BRD4O60885 1362 aaPredicted RBP8.12□□□□□ -1.11
BDNF-217ENST00000533131 MAP3K1Q13233 1512 aa8.12□□□□□ -1.11
BDNF-217ENST00000533131 SHTN1A0MZ66 631 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 RBP3P10745 1247 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 C8orf48Q96LL4 319 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 RMI1Q9H9A7 625 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 USP17L3A6NCW0 530 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 USP17L4A6NCW7 530 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 hCG_1984214I3L0E3 225 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 ABCC5O15440 1437 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 MFSD10Q14728 455 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 DNAJC21Q5F1R6 531 aaKnown RBP8.11□□□□□ -1.11
BDNF-217ENST00000533131 USP17L2Q6R6M4 530 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 USP17L1Q7RTZ2 530 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 FAM217BQ9NTX9 383 aaPredicted RBP8.11□□□□□ -1.11
BDNF-217ENST00000533131 KIF3BO15066 747 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 NEK3P51956 506 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 CAMK2BQ13554 666 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 SOGA3Q5TF21 947 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 GGT7Q9UJ14 662 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 PCDHB15Q9Y5E8 787 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 MAGED1Q9Y5V3 778 aaPredicted RBP8.11□□□□□ -1.11
BDNF-217ENST00000533131 UHRF1BP1LA0JNW5 1464 aa8.11□□□□□ -1.11
BDNF-217ENST00000533131 CENPJQ9HC77 1338 aaPredicted RBP8.11□□□□□ -1.11
BDNF-217ENST00000533131 ATP9BO43861 1147 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 TTF1Q15361 905 aaPredicted RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 DNTTIP2Q5QJE6 756 aaKnown RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 ZCCHC8Q6NZY4 707 aaKnown RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 GGT6Q6P531 493 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 RBM33Q96EV2 1170 aaKnown RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 ARNT2Q9HBZ2 717 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 EPRSP07814 1512 aaKnown RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 PARD3BQ8TEW8 1205 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 TRIM63Q969Q1 353 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 CWC25Q9NXE8 425 aaPredicted RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 FBXO2Q9UK22 296 aaPredicted RBP8.1□□□□□ -1.11
BDNF-217ENST00000533131 ABCC10Q5T3U5 1492 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 KDM5BQ9UGL1 1544 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 AGR2O95994 175 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 PPP2R1AP30153 589 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 MYO1HQ8N1T3 1032 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 MTMR8Q96EF0 704 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 SETDB2Q96T68 719 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 ALG2Q9H553 416 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 CD248Q9HCU0 757 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 KIAA1107Q9UPP5 1409 aa8.1□□□□□ -1.11
BDNF-217ENST00000533131 IPO8O15397 1037 aaKnown RBP8.09□□□□□ -1.11
BDNF-217ENST00000533131 FAM163BP0C2L3 166 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 NAA30Q147X3 362 aaPredicted RBP8.09□□□□□ -1.11
BDNF-217ENST00000533131 MCF2L2Q86YR7 1114 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 ITPRIPQ8IWB1 547 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 NDUFAF2Q8N183 169 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 TAGLN3Q9UI15 199 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 EFCAB5A4FU69 1503 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 TSPOAP1O95153 1857 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 PLB1Q6P1J6 1458 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 ELL2O00472 640 aaPredicted RBP8.09□□□□□ -1.11
BDNF-217ENST00000533131 UBE2Q1Q7Z7E8 422 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 SH3TC2Q8TF17 1288 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 FRMD6Q96NE9 622 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 MUC3BQ9H195 1237 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 AVENQ9NQS1 362 aaPredicted RBP8.09□□□□□ -1.11
BDNF-217ENST00000533131 ESYT3A0FGR9 886 aa8.09□□□□□ -1.11
BDNF-217ENST00000533131 HSP90AB1P08238 724 aaKnown RBP8.09□□□□□ -1.11
BDNF-217ENST00000533131 SH3BGRP55822 239 aaPredicted RBP8.09□□□□□ -1.11
BDNF-217ENST00000533131 GTF3C2Q8WUA4 911 aaPredicted RBP8.09□□□□□ -1.11
BDNF-217ENST00000533131 PABPN1LA6NDY0 278 aaKnown RBP8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L15C9J2P7 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L10C9JJH3 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L13C9JLJ4 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L12C9JPN9 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L11C9JVI0 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L21D6R901 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L18D6R9N7 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L22D6RA61 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L17D6RBQ6 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L19D6RCP7 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L20D6RJB6 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 TSPAN6O43657 245 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 TPM2P07951 284 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 CASQ1P31415 396 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 USP17L24Q0WX57 530 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 MEX3CQ5U5Q3 659 aaKnown RBP8.08□□□□□ -1.12
BDNF-217ENST00000533131 EPS8L1Q8TE68 723 aa8.08□□□□□ -1.12
BDNF-217ENST00000533131 RPRD2Q5VT52 1461 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms