RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 ALDH1L1O75891 902 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 PRELPP51888 382 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 RBM17Q96I25 401 aaKnown RBP14.78□□□□□ -0.04
ACER3-210ENST00000531352 SEC31BQ9NQW1 1179 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 FER1L6Q2WGJ9 1857 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 RLBP1P12271 317 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 TTLL11Q8NHH1 800 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 ARHGAP45Q92619 1136 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
ACER3-210ENST00000531352 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
ACER3-210ENST00000531352 EPHA10Q5JZY3 1008 aa14.77□□□□□ -0.04
ACER3-210ENST00000531352 ATF7IPQ6VMQ6 1270 aa14.77□□□□□ -0.04
ACER3-210ENST00000531352 API5Q9BZZ5 524 aaKnown RBP14.77□□□□□ -0.04
ACER3-210ENST00000531352 USP44Q9H0E7 712 aa14.77□□□□□ -0.04
ACER3-210ENST00000531352 C9orf78Q9NZ63 289 aaPredicted RBP14.77□□□□□ -0.04
ACER3-210ENST00000531352 NFKBIEO00221 500 aa14.77□□□□□ -0.05
ACER3-210ENST00000531352 CTSWP56202 376 aa14.77□□□□□ -0.05
ACER3-210ENST00000531352 RASSF7Q02833 373 aa14.77□□□□□ -0.05
ACER3-210ENST00000531352 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.05
ACER3-210ENST00000531352 KAZALD1Q96I82 304 aa14.77□□□□□ -0.05
ACER3-210ENST00000531352 FOXO4P98177 505 aa14.76□□□□□ -0.05
ACER3-210ENST00000531352 PLA2G12BQ9BX93 195 aa14.76□□□□□ -0.05
ACER3-210ENST00000531352 GREM2Q9H772 168 aa14.76□□□□□ -0.05
ACER3-210ENST00000531352 GRAPQ13588 217 aa14.75□□□□□ -0.05
ACER3-210ENST00000531352 GRAPLQ8TC17 118 aaPredicted RBP14.75□□□□□ -0.05
ACER3-210ENST00000531352 UTYO14607 1347 aa14.75□□□□□ -0.05
ACER3-210ENST00000531352 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
ACER3-210ENST00000531352 PPEF1O14829 653 aaPredicted RBP14.75□□□□□ -0.05
ACER3-210ENST00000531352 IPO8O15397 1037 aaKnown RBP14.75□□□□□ -0.05
ACER3-210ENST00000531352 CSF1RP07333 972 aa14.75□□□□□ -0.05
ACER3-210ENST00000531352 C20orf194Q5TEA3 1177 aa14.75□□□□□ -0.05
ACER3-210ENST00000531352 ZKSCAN2Q63HK3 967 aa14.75□□□□□ -0.05
ACER3-210ENST00000531352 SUCLG2Q96I99 432 aa14.75□□□□□ -0.05
ACER3-210ENST00000531352 CCT4P50991 539 aaKnown RBP14.74□□□□□ -0.05
ACER3-210ENST00000531352 CCDC152Q4G0S7 254 aa14.74□□□□□ -0.05
ACER3-210ENST00000531352 PANK1Q8TE04 598 aa14.74□□□□□ -0.05
ACER3-210ENST00000531352 BBOX1O75936 387 aa14.73□□□□□ -0.05
ACER3-210ENST00000531352 HSP90B1P14625 803 aaKnown RBP14.73□□□□□ -0.05
ACER3-210ENST00000531352 INTS3Q68E01 1043 aaKnown RBP14.73□□□□□ -0.05
ACER3-210ENST00000531352 RPS8P62241 208 aaKnown RBP14.73□□□□□ -0.05
ACER3-210ENST00000531352 FAM161AQ3B820 660 aa14.73□□□□□ -0.05
ACER3-210ENST00000531352 TMEM57Q8N5G2 664 aa14.73□□□□□ -0.05
ACER3-210ENST00000531352 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
ACER3-210ENST00000531352 SPEF2Q9C093 1822 aa14.72□□□□□ -0.05
ACER3-210ENST00000531352 CCDC93Q567U6 631 aa14.72□□□□□ -0.05
ACER3-210ENST00000531352 LMBR1LQ6UX01 489 aa14.72□□□□□ -0.05
ACER3-210ENST00000531352 MEIS3Q99687 375 aa14.72□□□□□ -0.05
ACER3-210ENST00000531352 BICC1Q9H694 974 aaKnown RBP14.72□□□□□ -0.05
ACER3-210ENST00000531352 ITGA6P23229 1130 aa14.71□□□□□ -0.05
ACER3-210ENST00000531352 C9orf131Q5VYM1 1079 aa14.71□□□□□ -0.05
ACER3-210ENST00000531352 SP8Q8IXZ3 490 aa14.71□□□□□ -0.05
ACER3-210ENST00000531352 ANKRD44Q8N8A2 993 aa14.7□□□□□ -0.06
ACER3-210ENST00000531352 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
ACER3-210ENST00000531352 LRRC37AA6NMS7 1700 aa14.7□□□□□ -0.06
ACER3-210ENST00000531352 RTL9Q8NET4 1388 aa14.7□□□□□ -0.06
ACER3-210ENST00000531352 YY1P25490 414 aa14.7□□□□□ -0.06
ACER3-210ENST00000531352 SOGA3Q5TF21 947 aa14.7□□□□□ -0.06
ACER3-210ENST00000531352 ZNF277Q9NRM2 450 aaPredicted RBP14.7□□□□□ -0.06
ACER3-210ENST00000531352 CHMP3Q9Y3E7 222 aa14.7□□□□□ -0.06
ACER3-210ENST00000531352 DICER1Q9UPY3 1922 aaKnown RBP14.69□□□□□ -0.06
ACER3-210ENST00000531352 DZIP1LQ8IYY4 767 aaKnown RBP14.69□□□□□ -0.06
ACER3-210ENST00000531352 RTKN2Q8IZC4 609 aa14.69□□□□□ -0.06
ACER3-210ENST00000531352 RNF181Q9P0P0 153 aa14.69□□□□□ -0.06
ACER3-210ENST00000531352 LTBP3Q9NS15 1303 aa14.69□□□□□ -0.06
ACER3-210ENST00000531352 WTIPA6NIX2 430 aaPredicted RBP14.69□□□□□ -0.06
ACER3-210ENST00000531352 LMNB1P20700 586 aa14.69□□□□□ -0.06
ACER3-210ENST00000531352 FKBP4Q02790 459 aaKnown RBP eCLIP14.69□□□□□ -0.06
ACER3-210ENST00000531352 RABL6Q3YEC7 729 aaPredicted RBP14.69□□□□□ -0.06
ACER3-210ENST00000531352 ANKRD18AQ8IVF6 992 aa14.69□□□□□ -0.06
ACER3-210ENST00000531352 ZNF594Q96JF6 807 aaPredicted RBP14.69□□□□□ -0.06
ACER3-210ENST00000531352 CC2D2BQ6DHV5 1058 aa14.68□□□□□ -0.06
ACER3-210ENST00000531352 DUOX1Q9NRD9 1551 aa14.67□□□□□ -0.06
ACER3-210ENST00000531352 UBTFL1P0CB47 393 aaPredicted RBP14.67□□□□□ -0.06
ACER3-210ENST00000531352 GPSM2P81274 684 aa14.67□□□□□ -0.06
ACER3-210ENST00000531352 FTSJ3Q8IY81 847 aaKnown RBP14.67□□□□□ -0.06
ACER3-210ENST00000531352 CDC5LQ99459 802 aaKnown RBP14.67□□□□□ -0.06
ACER3-210ENST00000531352 PSMD1Q99460 953 aa14.67□□□□□ -0.06
ACER3-210ENST00000531352 NSFL1CQ9UNZ2 370 aaKnown RBP14.67□□□□□ -0.06
ACER3-210ENST00000531352 LRRFIP2Q9Y608 721 aaKnown RBP14.67□□□□□ -0.06
ACER3-210ENST00000531352 LTBP1Q14766 1721 aa14.67□□□□□ -0.06
ACER3-210ENST00000531352 COL4A5P29400 1685 aa14.67□□□□□ -0.06
ACER3-210ENST00000531352 IFIT5Q13325 482 aaKnown RBP14.67□□□□□ -0.06
ACER3-210ENST00000531352 MPNDQ8N594 471 aa14.67□□□□□ -0.06
ACER3-210ENST00000531352 C1orf115Q9H7X2 142 aa14.67□□□□□ -0.06
ACER3-210ENST00000531352 ANKRD18BA2A2Z9 1011 aa14.66□□□□□ -0.06
ACER3-210ENST00000531352 DPP8Q6V1X1 898 aaPredicted RBP14.66□□□□□ -0.06
ACER3-210ENST00000531352 TMC4Q7Z404 712 aa14.66□□□□□ -0.06
ACER3-210ENST00000531352 BSDC1Q9NW68 430 aaPredicted RBP14.66□□□□□ -0.06
ACER3-210ENST00000531352 POLLQ9UGP5 575 aa14.66□□□□□ -0.06
ACER3-210ENST00000531352 MINPP1Q9UNW1 487 aa14.66□□□□□ -0.06
ACER3-210ENST00000531352 COG6Q9Y2V7 657 aa14.66□□□□□ -0.06
ACER3-210ENST00000531352 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
ACER3-210ENST00000531352 KLHDC4Q8TBB5 520 aa14.65□□□□□ -0.06
ACER3-210ENST00000531352 GPR101Q96P66 508 aaPredicted RBP14.65□□□□□ -0.06
ACER3-210ENST00000531352 RTFDC1Q9BY42 306 aaPredicted RBP14.65□□□□□ -0.06
ACER3-210ENST00000531352 CCDC57Q2TAC2 916 aa14.65□□□□□ -0.06
ACER3-210ENST00000531352 PUS3Q9BZE2 481 aaKnown RBP14.65□□□□□ -0.06
ACER3-210ENST00000531352 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
ACER3-210ENST00000531352 IGHMBP2P38935 993 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms