RNA–Protein interactions for RNA: ENST00000531150.5

CNKSR1-213, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-213ENST00000531150 CELF1Q92879 486 aaKnown RBP18.37■□□□□ 0.53
CNKSR1-213ENST00000531150 CCDC85AQ96PX6 553 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-213ENST00000531150 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
CNKSR1-213ENST00000531150 GRM8O00222 908 aa18.36■□□□□ 0.53
CNKSR1-213ENST00000531150 HSP90B1P14625 803 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-213ENST00000531150 CTSWP56202 376 aa18.36■□□□□ 0.53
CNKSR1-213ENST00000531150 CCDC93Q567U6 631 aa18.36■□□□□ 0.53
CNKSR1-213ENST00000531150 KIF16BQ96L93 1317 aa18.36■□□□□ 0.53
CNKSR1-213ENST00000531150 PLA2G12BQ9BX93 195 aa18.36■□□□□ 0.53
CNKSR1-213ENST00000531150 TNNQ9UQP3 1299 aa18.36■□□□□ 0.53
CNKSR1-213ENST00000531150 SOGA3Q5TF21 947 aa18.35■□□□□ 0.53
CNKSR1-213ENST00000531150 C9orf131Q5VYM1 1079 aa18.35■□□□□ 0.53
CNKSR1-213ENST00000531150 TTLL11Q8NHH1 800 aa18.35■□□□□ 0.53
CNKSR1-213ENST00000531150 API5Q9BZZ5 524 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-213ENST00000531150 SBF1O95248 1867 aa18.35■□□□□ 0.53
CNKSR1-213ENST00000531150 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 BBOX1O75936 387 aa18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 FOXO4P98177 505 aa18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 ARHGAP45Q92619 1136 aa18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 C9orf78Q9NZ63 289 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
CNKSR1-213ENST00000531150 UTYO14607 1347 aa18.33■□□□□ 0.53
CNKSR1-213ENST00000531150 NBPF7P0C2Y1 421 aaPredicted RBP18.33■□□□□ 0.52
CNKSR1-213ENST00000531150 TRIM27P14373 513 aa18.33■□□□□ 0.52
CNKSR1-213ENST00000531150 EPHA10Q5JZY3 1008 aa18.33■□□□□ 0.52
CNKSR1-213ENST00000531150 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.52
CNKSR1-213ENST00000531150 TAOK3Q9H2K8 898 aa18.33■□□□□ 0.52
CNKSR1-213ENST00000531150 GREM2Q9H772 168 aa18.33■□□□□ 0.52
CNKSR1-213ENST00000531150 MYH3P11055 1940 aa18.33■□□□□ 0.52
CNKSR1-213ENST00000531150 LRRC37AA6NMS7 1700 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 CSF1RP07333 972 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 LMNB1P20700 586 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 SP8Q8IXZ3 490 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 RTKN2Q8IZC4 609 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 KAZALD1Q96I82 304 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 RNF181Q9P0P0 153 aa18.32■□□□□ 0.52
CNKSR1-213ENST00000531150 RTL9Q8NET4 1388 aa18.31■□□□□ 0.52
CNKSR1-213ENST00000531150 RPS8P62241 208 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-213ENST00000531150 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
CNKSR1-213ENST00000531150 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
CNKSR1-213ENST00000531150 USP44Q9H0E7 712 aa18.31■□□□□ 0.52
CNKSR1-213ENST00000531150 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
CNKSR1-213ENST00000531150 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
CNKSR1-213ENST00000531150 CCDC88AQ3V6T2 1871 aa18.29■□□□□ 0.52
CNKSR1-213ENST00000531150 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-213ENST00000531150 TMC4Q7Z404 712 aa18.29■□□□□ 0.52
CNKSR1-213ENST00000531150 PSMD1Q99460 953 aa18.29■□□□□ 0.52
CNKSR1-213ENST00000531150 ZNF277Q9NRM2 450 aaPredicted RBP18.29■□□□□ 0.52
CNKSR1-213ENST00000531150 ITGA6P23229 1130 aa18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 LMBR1LQ6UX01 489 aa18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 ZNF784Q8NCA9 323 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 DUOX1Q9NRD9 1551 aa18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 TIAM2Q8IVF5 1701 aa18.28■□□□□ 0.52
CNKSR1-213ENST00000531150 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
CNKSR1-213ENST00000531150 ANKRD18AQ8IVF6 992 aa18.27■□□□□ 0.52
CNKSR1-213ENST00000531150 COL4A5P29400 1685 aa18.27■□□□□ 0.52
CNKSR1-213ENST00000531150 LTBP1Q14766 1721 aa18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 SPEF2Q9C093 1822 aa18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 GPSM2P81274 684 aa18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 MPNDQ8N594 471 aa18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 ANKRD44Q8N8A2 993 aa18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 RTFDC1Q9BY42 306 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 BICC1Q9H694 974 aaKnown RBP18.26■□□□□ 0.51
CNKSR1-213ENST00000531150 TMEM57Q8N5G2 664 aa18.25■□□□□ 0.51
CNKSR1-213ENST00000531150 MEIS3Q99687 375 aa18.25■□□□□ 0.51
CNKSR1-213ENST00000531150 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
CNKSR1-213ENST00000531150 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
CNKSR1-213ENST00000531150 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
CNKSR1-213ENST00000531150 DICER1Q9UPY3 1922 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-213ENST00000531150 RLBP1P12271 317 aa18.24■□□□□ 0.51
CNKSR1-213ENST00000531150 RABL6Q3YEC7 729 aaPredicted RBP18.24■□□□□ 0.51
CNKSR1-213ENST00000531150 BSDC1Q9NW68 430 aaPredicted RBP18.24■□□□□ 0.51
CNKSR1-213ENST00000531150 NSFL1CQ9UNZ2 370 aaKnown RBP18.24■□□□□ 0.51
CNKSR1-213ENST00000531150 ANKRD18BA2A2Z9 1011 aa18.23■□□□□ 0.51
CNKSR1-213ENST00000531150 ZNF526Q8TF50 670 aaPredicted RBP18.23■□□□□ 0.51
CNKSR1-213ENST00000531150 ZNF594Q96JF6 807 aaPredicted RBP18.23■□□□□ 0.51
CNKSR1-213ENST00000531150 POLLQ9UGP5 575 aa18.23■□□□□ 0.51
CNKSR1-213ENST00000531150 MINPP1Q9UNW1 487 aa18.23■□□□□ 0.51
CNKSR1-213ENST00000531150 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
CNKSR1-213ENST00000531150 IGHMBP2P38935 993 aaKnown RBP18.22■□□□□ 0.51
CNKSR1-213ENST00000531150 IFIT5Q13325 482 aaKnown RBP18.22■□□□□ 0.51
CNKSR1-213ENST00000531150 AOC3Q16853 763 aa18.22■□□□□ 0.51
CNKSR1-213ENST00000531150 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-213ENST00000531150 UBTFL1P0CB47 393 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-213ENST00000531150 DZIP1LQ8IYY4 767 aaKnown RBP18.21■□□□□ 0.51
CNKSR1-213ENST00000531150 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
CNKSR1-213ENST00000531150 GPR101Q96P66 508 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-213ENST00000531150 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
CNKSR1-213ENST00000531150 LRRFIP2Q9Y608 721 aaKnown RBP18.21■□□□□ 0.51
CNKSR1-213ENST00000531150 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms