RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DNAJC2Q99543 621 aaKnown RBP13.83□□□□□ -0.19
USP35-207ENST00000530546 DTNBO60941 627 aa13.83□□□□□ -0.2
USP35-207ENST00000530546 CASTP20810 708 aaKnown RBP13.83□□□□□ -0.2
USP35-207ENST00000530546 FOXO4P98177 505 aa13.83□□□□□ -0.2
USP35-207ENST00000530546 FOXD4L6Q3SYB3 417 aaPredicted RBP13.83□□□□□ -0.2
USP35-207ENST00000530546 FOXD4L3Q6VB84 417 aaPredicted RBP13.83□□□□□ -0.2
USP35-207ENST00000530546 ZNF594Q96JF6 807 aaPredicted RBP13.83□□□□□ -0.2
USP35-207ENST00000530546 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
USP35-207ENST00000530546 CCDC39Q9UFE4 941 aa13.83□□□□□ -0.2
USP35-207ENST00000530546 A0A0D9SFI3 127 aa13.83□□□□□ -0.2
USP35-207ENST00000530546 GLI3P10071 1580 aa13.83□□□□□ -0.2
USP35-207ENST00000530546 JAKMIP1Q96N16 626 aaKnown RBP13.82□□□□□ -0.2
USP35-207ENST00000530546 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
USP35-207ENST00000530546 AK2P54819 239 aa13.82□□□□□ -0.2
USP35-207ENST00000530546 CUL4AQ13619 759 aa13.82□□□□□ -0.2
USP35-207ENST00000530546 ADCK5Q3MIX3 580 aa13.82□□□□□ -0.2
USP35-207ENST00000530546 EPB41L2O43491 1005 aaKnown RBP13.81□□□□□ -0.2
USP35-207ENST00000530546 CHGBP05060 677 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 ATG3Q9NT62 314 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 RBM8AQ9Y5S9 174 aaKnown RBP13.81□□□□□ -0.2
USP35-207ENST00000530546 KAT6BQ8WYB5 2073 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
USP35-207ENST00000530546 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 PRDM10Q9NQV6 1147 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
USP35-207ENST00000530546 ABCA3Q99758 1704 aa13.8□□□□□ -0.2
USP35-207ENST00000530546 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
USP35-207ENST00000530546 LETM1O95202 739 aaPredicted RBP13.8□□□□□ -0.2
USP35-207ENST00000530546 ZSCAN23Q3MJ62 389 aa13.8□□□□□ -0.2
USP35-207ENST00000530546 HIP1O00291 1037 aa13.8□□□□□ -0.2
USP35-207ENST00000530546 TIMM10P62072 90 aa13.8□□□□□ -0.2
USP35-207ENST00000530546 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
USP35-207ENST00000530546 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
USP35-207ENST00000530546 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
USP35-207ENST00000530546 GPTP24298 496 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 ZNF589Q86UQ0 364 aaPredicted RBP13.79□□□□□ -0.2
USP35-207ENST00000530546 MYRIPQ8NFW9 859 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 ATP5JP18859 108 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 CREB3L3Q68CJ9 461 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 TTC14Q96N46 770 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 PUS3Q9BZE2 481 aaKnown RBP13.79□□□□□ -0.2
USP35-207ENST00000530546 LAMB4A4D0S4 1761 aa13.79□□□□□ -0.2
USP35-207ENST00000530546 EXOC5O00471 708 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 STARD3NLO95772 234 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 ZKSCAN1P17029 563 aaPredicted RBP13.78□□□□□ -0.2
USP35-207ENST00000530546 RBSNQ9H1K0 784 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 TNS2Q63HR2 1409 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 TCIRG1Q13488 830 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 ATG9AQ7Z3C6 839 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 INTS4Q96HW7 963 aaKnown RBP13.78□□□□□ -0.2
USP35-207ENST00000530546 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 LMBRD1Q9NUN5 540 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 LIMCH1Q9UPQ0 1083 aa13.78□□□□□ -0.2
USP35-207ENST00000530546 LARGE1O95461 756 aa13.77□□□□□ -0.2
USP35-207ENST00000530546 NECTIN1Q15223 517 aa13.77□□□□□ -0.2
USP35-207ENST00000530546 SYNE4Q8N205 404 aa13.77□□□□□ -0.2
USP35-207ENST00000530546 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.2
USP35-207ENST00000530546 HMGN5P82970 282 aaKnown RBP13.77□□□□□ -0.21
USP35-207ENST00000530546 COL9A3Q14050 684 aaPredicted RBP13.77□□□□□ -0.21
USP35-207ENST00000530546 PPP4R3BQ5MIZ7 849 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 NHSL1Q5SYE7 1610 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 SEC62Q99442 399 aaKnown RBP13.77□□□□□ -0.21
USP35-207ENST00000530546 CYP46A1Q9Y6A2 500 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 TAF6LQ9Y6J9 622 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 COL15A1P39059 1388 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 SLC27A2O14975 620 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 GTF2F1P35269 517 aaKnown RBP eCLIP13.77□□□□□ -0.21
USP35-207ENST00000530546 SLFNL1Q499Z3 407 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
USP35-207ENST00000530546 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
USP35-207ENST00000530546 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 NUTM2BA6NNL0 878 aaPredicted RBP13.76□□□□□ -0.21
USP35-207ENST00000530546 NUTM2EB1AL46 878 aaPredicted RBP13.76□□□□□ -0.21
USP35-207ENST00000530546 EYA2O00167 538 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 BRD1O95696 1058 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
USP35-207ENST00000530546 HLFQ16534 295 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 NUTM2AQ8IVF1 878 aaPredicted RBP13.76□□□□□ -0.21
USP35-207ENST00000530546 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 TEX13AQ9BXU3 409 aaPredicted RBP13.76□□□□□ -0.21
USP35-207ENST00000530546 GOLIM4O00461 696 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 IL15P40933 162 aaPredicted RBP13.76□□□□□ -0.21
USP35-207ENST00000530546 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 SLC4A9Q96Q91 983 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 ARID3AQ99856 593 aa13.76□□□□□ -0.21
USP35-207ENST00000530546 TOGARAM1Q9Y4F4 1720 aa13.75□□□□□ -0.21
USP35-207ENST00000530546 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
USP35-207ENST00000530546 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
USP35-207ENST00000530546 UBR2Q8IWV8 1755 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms