RNA–Protein interactions for RNA: ENST00000530522.1

THUMPD2-208, Transcript of THUMP domain containing 2, humanhuman

TSL 2

Gene THUMPD2, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-208ENST00000530522 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
THUMPD2-208ENST00000530522 TAF7LQ5H9L4 462 aa20.47■□□□□ 0.87
THUMPD2-208ENST00000530522 PELP1Q8IZL8 1130 aaKnown RBP20.47■□□□□ 0.87
THUMPD2-208ENST00000530522 LNPKQ9C0E8 428 aa20.47■□□□□ 0.87
THUMPD2-208ENST00000530522 SIL1Q9H173 461 aa20.47■□□□□ 0.87
THUMPD2-208ENST00000530522 SERPINB2P05120 415 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 MSL1Q68DK7 614 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 KLHDC4Q8TBB5 520 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 LRRCC1Q9C099 1032 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 RGS3P49796 1198 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 ST5P78524 1137 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 SKAP1Q86WV1 359 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 GREM2Q9H772 168 aa20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 NOP58Q9Y2X3 529 aaKnown RBP20.46■□□□□ 0.87
THUMPD2-208ENST00000530522 ANKRD18BA2A2Z9 1011 aa20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 ITGA6P23229 1130 aa20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 RFX5P48382 616 aaPredicted RBP20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 PTPN12Q05209 780 aaKnown RBP20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 ERC1Q8IUD2 1116 aa20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 NLRP3Q96P20 1036 aa20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 COPRSQ9NQ92 184 aa20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
THUMPD2-208ENST00000530522 POLRMTO00411 1230 aaKnown RBP20.44■□□□□ 0.86
THUMPD2-208ENST00000530522 DDR1Q08345 913 aa20.44■□□□□ 0.86
THUMPD2-208ENST00000530522 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
THUMPD2-208ENST00000530522 PARP3Q9Y6F1 533 aa20.44■□□□□ 0.86
THUMPD2-208ENST00000530522 QSER1Q2KHR3 1735 aa20.43■□□□□ 0.86
THUMPD2-208ENST00000530522 SMARCA5O60264 1052 aaPredicted RBP20.43■□□□□ 0.86
THUMPD2-208ENST00000530522 MMP10P09238 476 aa20.43■□□□□ 0.86
THUMPD2-208ENST00000530522 PRR5LQ6MZQ0 368 aa20.43■□□□□ 0.86
THUMPD2-208ENST00000530522 RHPN1Q8TCX5 695 aa20.42■□□□□ 0.86
THUMPD2-208ENST00000530522 ZNF594Q96JF6 807 aaPredicted RBP20.42■□□□□ 0.86
THUMPD2-208ENST00000530522 DDX60Q8IY21 1712 aaKnown RBP20.42■□□□□ 0.86
THUMPD2-208ENST00000530522 MYH3P11055 1940 aa20.42■□□□□ 0.86
THUMPD2-208ENST00000530522 LAMB2P55268 1798 aa20.42■□□□□ 0.86
THUMPD2-208ENST00000530522 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
THUMPD2-208ENST00000530522 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
THUMPD2-208ENST00000530522 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
THUMPD2-208ENST00000530522 C3orf67Q6ZVT6 689 aa20.39■□□□□ 0.85
THUMPD2-208ENST00000530522 ILDR2Q71H61 639 aa20.39■□□□□ 0.85
THUMPD2-208ENST00000530522 SLC16A10Q8TF71 515 aa20.39■□□□□ 0.85
THUMPD2-208ENST00000530522 EYA2O00167 538 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 PDE4AP27815 886 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 LDHAL6AQ6ZMR3 332 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 CDC5LQ99459 802 aaKnown RBP20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 SEC31BQ9NQW1 1179 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 CNNM1Q9NRU3 951 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 RTL9Q8NET4 1388 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 CIAO1O76071 339 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 IL15P40933 162 aaPredicted RBP20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 CLASRPQ8N2M8 674 aaKnown RBP20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 MPHOSPH8Q99549 860 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 FBXO3Q9UK99 471 aa20.38■□□□□ 0.85
THUMPD2-208ENST00000530522 SASH1O94885 1247 aa20.37■□□□□ 0.85
THUMPD2-208ENST00000530522 R3HDM1Q15032 1099 aaKnown RBP20.37■□□□□ 0.85
THUMPD2-208ENST00000530522 LRRC24Q50LG9 513 aa20.37■□□□□ 0.85
THUMPD2-208ENST00000530522 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
THUMPD2-208ENST00000530522 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
THUMPD2-208ENST00000530522 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
THUMPD2-208ENST00000530522 RIC1Q4ADV7 1423 aa20.35■□□□□ 0.85
THUMPD2-208ENST00000530522 TFCP2Q12800 502 aa20.35■□□□□ 0.85
THUMPD2-208ENST00000530522 ATG9AQ7Z3C6 839 aa20.35■□□□□ 0.85
THUMPD2-208ENST00000530522 ANKRD18AQ8IVF6 992 aa20.35■□□□□ 0.85
THUMPD2-208ENST00000530522 RPGRQ92834 1020 aaKnown RBP20.35■□□□□ 0.85
THUMPD2-208ENST00000530522 IFIT2P09913 472 aaKnown RBP20.34■□□□□ 0.85
THUMPD2-208ENST00000530522 AACSQ86V21 672 aa20.34■□□□□ 0.85
THUMPD2-208ENST00000530522 BRIP1Q9BX63 1249 aa20.34■□□□□ 0.85
THUMPD2-208ENST00000530522 CEP126Q9P2H0 1117 aa20.34■□□□□ 0.85
THUMPD2-208ENST00000530522 TNRC6CQ9HCJ0 1690 aaKnown RBP20.33■□□□□ 0.84
THUMPD2-208ENST00000530522 METTL24Q5JXM2 366 aa20.33■□□□□ 0.84
THUMPD2-208ENST00000530522 OTUD7AQ8TE49 926 aaPredicted RBP20.33■□□□□ 0.84
THUMPD2-208ENST00000530522 ZBTB7AO95365 584 aa20.32■□□□□ 0.84
THUMPD2-208ENST00000530522 PDE6BP35913 854 aa20.32■□□□□ 0.84
THUMPD2-208ENST00000530522 PLEKHM2Q8IWE5 1019 aa20.32■□□□□ 0.84
THUMPD2-208ENST00000530522 RIPOR2Q9Y4F9 1068 aa20.32■□□□□ 0.84
THUMPD2-208ENST00000530522 RBM17Q96I25 401 aaKnown RBP20.31■□□□□ 0.84
THUMPD2-208ENST00000530522 MROH5Q6ZUA9 1318 aa20.31■□□□□ 0.84
THUMPD2-208ENST00000530522 NRXN2Q9P2S2 1712 aa20.31■□□□□ 0.84
THUMPD2-208ENST00000530522 MX1P20591 662 aa20.3■□□□□ 0.84
THUMPD2-208ENST00000530522 RPS8P62241 208 aaKnown RBP20.3■□□□□ 0.84
THUMPD2-208ENST00000530522 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
THUMPD2-208ENST00000530522 TNNI3KQ59H18 835 aa20.3■□□□□ 0.84
THUMPD2-208ENST00000530522 CELF1Q92879 486 aaKnown RBP20.3■□□□□ 0.84
THUMPD2-208ENST00000530522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.3■□□□□ 0.84
THUMPD2-208ENST00000530522 FPGT-TNNI3KV9GXZ4 949 aa20.3■□□□□ 0.84
THUMPD2-208ENST00000530522 PSDA5PKW4 1024 aaPredicted RBP20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 EAF2Q96CJ1 260 aaPredicted RBP20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 GPATCH3Q96I76 525 aa20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 MTFR1LQ9H019 292 aa20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 CCDC8Q9H0W5 538 aaPredicted RBP20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 AKAP2Q9Y2D5 859 aa20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 CASZ1Q86V15 1759 aa20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 GRAPQ13588 217 aa20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 GRAPLQ8TC17 118 aaPredicted RBP20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 BSDC1Q9NW68 430 aaPredicted RBP20.29■□□□□ 0.84
THUMPD2-208ENST00000530522 LRP5O75197 1615 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms