RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 RAB3GAP1Q15042 981 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 TRMT1LQ7Z2T5 733 aaKnown RBP8.74□□□□□ -1.01
CTNND1-223ENST00000529986 A0A1W2PRG0 241 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 POTEJP0CG39 1038 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 MARCKSP29966 332 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-223ENST00000529986 ZSCAN29Q8IWY8 852 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-223ENST00000529986 MYD88Q99836 296 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 SELENOSQ9BQE4 189 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 DUOX2Q9NRD8 1548 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 CTNNA2P26232 953 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 NUCB1Q02818 461 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 CKAP4Q07065 602 aaKnown RBP8.74□□□□□ -1.01
CTNND1-223ENST00000529986 C6orf163Q5TEZ5 329 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 C16orf71Q8IYS4 520 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-223ENST00000529986 FEZ1Q99689 392 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 NUP153P49790 1475 aaKnown RBP8.74□□□□□ -1.01
CTNND1-223ENST00000529986 CTAGE9A4FU28 777 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 BRF1Q92994 677 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 TRIM47Q96LD4 638 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 NEK1Q96PY6 1258 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 HOMER2Q9NSB8 354 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 RALGAPBQ86X10 1494 aa8.74□□□□□ -1.01
CTNND1-223ENST00000529986 MXRA7P84157 204 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 MMRN2Q9H8L6 949 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 OPA1O60313 960 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 CAVIN2O95810 425 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 F13A1P00488 732 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 ZNF569Q5MCW4 686 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 RRAGBQ5VZM2 374 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 TNNQ9UQP3 1299 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 A0A1B0GUL7 405 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC194A0A1B0GVG4 234 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 MPHOSPH10O00566 681 aaKnown RBP8.73□□□□□ -1.01
CTNND1-223ENST00000529986 FGFR1OPO95684 399 aaKnown RBP8.73□□□□□ -1.01
CTNND1-223ENST00000529986 IARSP41252 1262 aaKnown RBP8.73□□□□□ -1.01
CTNND1-223ENST00000529986 CTCFLQ8NI51 663 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-223ENST00000529986 SLC26A6Q9BXS9 759 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 SNRKQ9NRH2 765 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 SEC63Q9UGP8 760 aaKnown RBP8.73□□□□□ -1.01
CTNND1-223ENST00000529986 PTPRKQ15262 1439 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 PBRM1Q86U86 1689 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 GOLIM4O00461 696 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 CLGNO14967 610 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 RAPGEF3O95398 923 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 KIAA0753Q2KHM9 967 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 HS1BP3Q53T59 392 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC97Q96F63 343 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-223ENST00000529986 PHAXQ9H814 394 aaKnown RBP8.73□□□□□ -1.01
CTNND1-223ENST00000529986 IFNKQ9P0W0 207 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 GUCA1BQ9UMX6 200 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 FANCAO15360 1455 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC196A0A1B0GTZ2 297 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 SPATA24Q86W54 205 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 CCDC155Q8N6L0 562 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 IFT81Q8WYA0 676 aa8.73□□□□□ -1.01
CTNND1-223ENST00000529986 EIF2AK4Q9P2K8 1649 aaKnown RBP8.72□□□□□ -1.01
CTNND1-223ENST00000529986 KIF4AO95239 1232 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 EVI5LQ96CN4 794 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 EVCP57679 992 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 CPLX4Q7Z7G2 160 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 THEMISQ8N1K5 641 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-223ENST00000529986 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
CTNND1-223ENST00000529986 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 ECHDC1Q9NTX5 307 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 PRC1O43663 620 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 BICDL1Q6ZP65 573 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 PROSER2Q86WR7 435 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-223ENST00000529986 MKNK2Q9HBH9 465 aa8.72□□□□□ -1.01
CTNND1-223ENST00000529986 TLDC2A0PJX2 215 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 DESP17661 470 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 SLC4A8Q2Y0W8 1093 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.01
CTNND1-223ENST00000529986 SNX21Q969T3 373 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 ZSCAN16Q9H4T2 348 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-223ENST00000529986 STX17P56962 302 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 ELF2Q15723 593 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 TMEM67Q5HYA8 995 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 USHBP1Q8N6Y0 703 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 NSRP1Q9H0G5 558 aaKnown RBP8.71□□□□□ -1.01
CTNND1-223ENST00000529986 CEP83Q9Y592 693 aa8.71□□□□□ -1.01
CTNND1-223ENST00000529986 METAP2P50579 478 aaKnown RBP eCLIP8.71□□□□□ -1.02
CTNND1-223ENST00000529986 ARID5AQ03989 594 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 PPP2R3AQ06190 1150 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 PPP1R14CQ8TAE6 165 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.71□□□□□ -1.024e-9■□□□□ 9.9
CTNND1-223ENST00000529986 CYLC1P35663 651 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-223ENST00000529986 ANKS4BQ8N8V4 417 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 FAM76AQ8TAV0 307 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 JARID2Q92833 1246 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-223ENST00000529986 NUP160Q12769 1436 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 KIF20AO95235 890 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 UBA7P41226 1012 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 APBB1IPQ7Z5R6 666 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-223ENST00000529986 ATP10BO94823 1461 aa8.71□□□□□ -1.02
CTNND1-223ENST00000529986 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 PIP4K2BP78356 416 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 TMEM266Q2M3C6 531 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 PPP1R42Q7Z4L9 355 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms