RNA–Protein interactions for RNA: ENST00000528487.1

SYVN1-210, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 775 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-210ENST00000528487 TTLL11Q8NHH1 800 aa17.65■□□□□ 0.42
SYVN1-210ENST00000528487 UTYO14607 1347 aa17.65■□□□□ 0.42
SYVN1-210ENST00000528487 SLX4Q8IY92 1834 aa17.65■□□□□ 0.42
SYVN1-210ENST00000528487 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
SYVN1-210ENST00000528487 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
SYVN1-210ENST00000528487 GRAPQ13588 217 aa17.64■□□□□ 0.41
SYVN1-210ENST00000528487 SOGA3Q5TF21 947 aa17.64■□□□□ 0.41
SYVN1-210ENST00000528487 INTS3Q68E01 1043 aaKnown RBP17.64■□□□□ 0.41
SYVN1-210ENST00000528487 GRAPLQ8TC17 118 aaPredicted RBP17.64■□□□□ 0.41
SYVN1-210ENST00000528487 USP44Q9H0E7 712 aa17.64■□□□□ 0.41
SYVN1-210ENST00000528487 TNNQ9UQP3 1299 aa17.64■□□□□ 0.41
SYVN1-210ENST00000528487 LAMB2P55268 1798 aa17.63■□□□□ 0.41
SYVN1-210ENST00000528487 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
SYVN1-210ENST00000528487 CSF1RP07333 972 aa17.63■□□□□ 0.41
SYVN1-210ENST00000528487 FOXO4P98177 505 aa17.63■□□□□ 0.41
SYVN1-210ENST00000528487 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
SYVN1-210ENST00000528487 CCDC85AQ96PX6 553 aaPredicted RBP17.63■□□□□ 0.41
SYVN1-210ENST00000528487 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
SYVN1-210ENST00000528487 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
SYVN1-210ENST00000528487 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
SYVN1-210ENST00000528487 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
SYVN1-210ENST00000528487 CCDC93Q567U6 631 aa17.61■□□□□ 0.41
SYVN1-210ENST00000528487 CC2D2BQ6DHV5 1058 aa17.61■□□□□ 0.41
SYVN1-210ENST00000528487 TMC4Q7Z404 712 aa17.61■□□□□ 0.41
SYVN1-210ENST00000528487 SUCLG2Q96I99 432 aa17.61■□□□□ 0.41
SYVN1-210ENST00000528487 TMX4Q9H1E5 349 aaPredicted RBP17.61■□□□□ 0.41
SYVN1-210ENST00000528487 GREM2Q9H772 168 aa17.61■□□□□ 0.41
SYVN1-210ENST00000528487 ATP6V0A2Q9Y487 856 aa17.61■□□□□ 0.41
SYVN1-210ENST00000528487 NFKBIEO00221 500 aa17.6■□□□□ 0.41
SYVN1-210ENST00000528487 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
SYVN1-210ENST00000528487 SP8Q8IXZ3 490 aa17.6■□□□□ 0.41
SYVN1-210ENST00000528487 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
SYVN1-210ENST00000528487 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
SYVN1-210ENST00000528487 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
SYVN1-210ENST00000528487 KAZALD1Q96I82 304 aa17.6■□□□□ 0.41
SYVN1-210ENST00000528487 RTL9Q8NET4 1388 aa17.6■□□□□ 0.41
SYVN1-210ENST00000528487 CACNA1SQ13698 1873 aa17.59■□□□□ 0.41
SYVN1-210ENST00000528487 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
SYVN1-210ENST00000528487 LMBR1LQ6UX01 489 aa17.59■□□□□ 0.41
SYVN1-210ENST00000528487 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
SYVN1-210ENST00000528487 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
SYVN1-210ENST00000528487 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
SYVN1-210ENST00000528487 ITGA6P23229 1130 aa17.58■□□□□ 0.4
SYVN1-210ENST00000528487 RASSF7Q02833 373 aa17.58■□□□□ 0.4
SYVN1-210ENST00000528487 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
SYVN1-210ENST00000528487 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
SYVN1-210ENST00000528487 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
SYVN1-210ENST00000528487 BICC1Q9H694 974 aaKnown RBP17.58■□□□□ 0.4
SYVN1-210ENST00000528487 LTBP3Q9NS15 1303 aa17.57■□□□□ 0.4
SYVN1-210ENST00000528487 MS4A1P11836 297 aa17.57■□□□□ 0.4
SYVN1-210ENST00000528487 RLBP1P12271 317 aa17.57■□□□□ 0.4
SYVN1-210ENST00000528487 IFIT5Q13325 482 aaKnown RBP17.57■□□□□ 0.4
SYVN1-210ENST00000528487 MEIS3Q99687 375 aa17.57■□□□□ 0.4
SYVN1-210ENST00000528487 TAOK3Q9H2K8 898 aa17.57■□□□□ 0.4
SYVN1-210ENST00000528487 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
SYVN1-210ENST00000528487 CHMP3Q9Y3E7 222 aa17.57■□□□□ 0.4
SYVN1-210ENST00000528487 TAF1P21675 1872 aa17.56■□□□□ 0.4
SYVN1-210ENST00000528487 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
SYVN1-210ENST00000528487 PLIN1O60240 522 aa17.56■□□□□ 0.4
SYVN1-210ENST00000528487 GNAI3P08754 354 aa17.56■□□□□ 0.4
SYVN1-210ENST00000528487 LMNB1P20700 586 aa17.56■□□□□ 0.4
SYVN1-210ENST00000528487 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
SYVN1-210ENST00000528487 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
SYVN1-210ENST00000528487 MYH3P11055 1940 aa17.56■□□□□ 0.4
SYVN1-210ENST00000528487 PRELPP51888 382 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 C9orf131Q5VYM1 1079 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 ANKRD44Q8N8A2 993 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.55■□□□□ 0.4
SYVN1-210ENST00000528487 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 PSMD1Q99460 953 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 BSDC1Q9NW68 430 aaPredicted RBP17.55■□□□□ 0.4
SYVN1-210ENST00000528487 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 COL4A1P02462 1669 aa17.55■□□□□ 0.4
SYVN1-210ENST00000528487 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
SYVN1-210ENST00000528487 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
SYVN1-210ENST00000528487 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
SYVN1-210ENST00000528487 MPNDQ8N594 471 aa17.54■□□□□ 0.4
SYVN1-210ENST00000528487 RNF181Q9P0P0 153 aa17.54■□□□□ 0.4
SYVN1-210ENST00000528487 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
SYVN1-210ENST00000528487 CHD4Q14839 1912 aa17.53■□□□□ 0.4
SYVN1-210ENST00000528487 YY1P25490 414 aa17.53■□□□□ 0.4
SYVN1-210ENST00000528487 MPHOSPH8Q99549 860 aa17.53■□□□□ 0.4
SYVN1-210ENST00000528487 ZNF277Q9NRM2 450 aaPredicted RBP17.53■□□□□ 0.4
SYVN1-210ENST00000528487 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
SYVN1-210ENST00000528487 LRRFIP2Q9Y608 721 aaKnown RBP17.53■□□□□ 0.4
SYVN1-210ENST00000528487 GPSM2P81274 684 aa17.52■□□□□ 0.4
SYVN1-210ENST00000528487 TAF7LQ5H9L4 462 aa17.52■□□□□ 0.4
SYVN1-210ENST00000528487 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.4
SYVN1-210ENST00000528487 MINPP1Q9UNW1 487 aa17.52■□□□□ 0.4
SYVN1-210ENST00000528487 ZBTB7BO15156 539 aaPredicted RBP17.51■□□□□ 0.39
SYVN1-210ENST00000528487 GNAI2P04899 355 aa17.51■□□□□ 0.39
SYVN1-210ENST00000528487 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
SYVN1-210ENST00000528487 SUPT20HQ8NEM7 779 aa17.51■□□□□ 0.39
SYVN1-210ENST00000528487 ZNF594Q96JF6 807 aaPredicted RBP17.51■□□□□ 0.39
SYVN1-210ENST00000528487 ANKIB1Q9P2G1 1089 aa17.51■□□□□ 0.39
SYVN1-210ENST00000528487 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
SYVN1-210ENST00000528487 VPS33BQ9H267 617 aa17.5■□□□□ 0.39
SYVN1-210ENST00000528487 PODXL2Q9NZ53 605 aa17.5■□□□□ 0.39
SYVN1-210ENST00000528487 MVPQ14764 893 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms