RNA–Protein interactions for RNA: ENST00000528482.6

AP004608.1-203, humanhuman

TSL 5 BASIC

Gene AP004608.1, Length 3,679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-203ENST00000528482 TIGD1Q96MW7 591 aa17.49■□□□□ 0.39
AP004608.1-203ENST00000528482 PLEKHG3A1L390 1219 aa17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 IRX5P78411 483 aaPredicted RBP17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 CDK11BP21127 795 aaKnown RBP17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 SLFNL1Q499Z3 407 aa17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 CHD2O14647 1828 aaKnown RBP17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 ADCY9O60503 1353 aa17.48■□□□□ 0.39
AP004608.1-203ENST00000528482 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 VGLL3A8MV65 326 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 HIP1O00291 1037 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 GIGYF1O75420 1035 aaPredicted RBP17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 ERCC6LQ2NKX8 1250 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 CCAR1Q8IX12 1150 aaKnown RBP17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 SYTL4Q96C24 671 aaPredicted RBP17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 CCDC8Q9H0W5 538 aaPredicted RBP17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
AP004608.1-203ENST00000528482 DHX40Q8IX18 779 aaKnown RBP17.46■□□□□ 0.39
AP004608.1-203ENST00000528482 FTOQ9C0B1 505 aaKnown RBP eCLIP17.46■□□□□ 0.39
AP004608.1-203ENST00000528482 NPHP4O75161 1426 aaPredicted RBP17.46■□□□□ 0.39
AP004608.1-203ENST00000528482 FOSBP53539 338 aa17.46■□□□□ 0.39
AP004608.1-203ENST00000528482 ERCC4Q92889 916 aaPredicted RBP17.46■□□□□ 0.39
AP004608.1-203ENST00000528482 BOLA2Q9H3K6 86 aa17.46■□□□□ 0.39
AP004608.1-203ENST00000528482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
AP004608.1-203ENST00000528482 FMN2Q9NZ56 1722 aa17.46■□□□□ 0.38
AP004608.1-203ENST00000528482 SNW1Q13573 536 aaKnown RBP17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 LTV1Q96GA3 475 aaPredicted RBP17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 TECPR2O15040 1411 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 CTAGE5O15320 804 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 GOLPH3LQ9H4A5 285 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 HSP90B1P14625 803 aaKnown RBP17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 AOPEPQ8N6M6 819 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 LRRN4CLQ8ND94 238 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 NOL10Q9BSC4 688 aaKnown RBP17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
AP004608.1-203ENST00000528482 MTX1Q13505 466 aa17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 BMS1Q14692 1282 aaKnown RBP17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 EAF2Q96CJ1 260 aaPredicted RBP17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 KIF2AO00139 706 aaPredicted RBP17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 MLECQ14165 292 aa17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 ZSCAN16Q9H4T2 348 aaPredicted RBP17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 CALCOCO1Q9P1Z2 691 aa17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 KINO60870 393 aaKnown RBP17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 CCDC73Q6ZRK6 1079 aa17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 ANO10Q9NW15 660 aa17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 TLR7Q9NYK1 1049 aaKnown RBP17.44■□□□□ 0.38
AP004608.1-203ENST00000528482 SYT10Q6XYQ8 523 aa17.43■□□□□ 0.38
AP004608.1-203ENST00000528482 H2AFXP16104 143 aaPredicted RBP17.43■□□□□ 0.38
AP004608.1-203ENST00000528482 E4F1Q66K89 784 aaPredicted RBP17.43■□□□□ 0.38
AP004608.1-203ENST00000528482 GSDMDP57764 484 aa17.43■□□□□ 0.38
AP004608.1-203ENST00000528482 CEP57L1Q8IYX8 460 aa17.43■□□□□ 0.38
AP004608.1-203ENST00000528482 SNRKQ9NRH2 765 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 CLCN6P51797 869 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 SASH1O94885 1247 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 ADD1P35611 737 aaKnown RBP17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 Q6ZUG5 572 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 NBPF11Q86T75 865 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 L2HGDHQ9H9P8 463 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 KCND1Q9NSA2 647 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 FHOD1Q9Y613 1164 aa17.42■□□□□ 0.38
AP004608.1-203ENST00000528482 USHBP1Q8N6Y0 703 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 PPP1R13BQ96KQ4 1090 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 MED23Q9ULK4 1368 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 KCNQ3O43525 872 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 LRRC2Q9BYS8 371 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 TRERF1Q96PN7 1200 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 NEK1Q96PY6 1258 aa17.41■□□□□ 0.38
AP004608.1-203ENST00000528482 G3BP1Q13283 466 aaKnown RBP eCLIP17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 CWF19L2Q2TBE0 894 aaKnown RBP17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 ARHGAP29Q52LW3 1261 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 EDC3Q96F86 508 aaKnown RBP17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 TAF5LO75529 589 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 CYP2C19P33261 490 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 FSIP1Q8NA03 581 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 OSBPL5Q9H0X9 879 aaPredicted RBP17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 SIL1Q9H173 461 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 TSGA10IPQ3SY00 556 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 NAT10Q9H0A0 1025 aaKnown RBP17.4■□□□□ 0.38
AP004608.1-203ENST00000528482 SMC2O95347 1197 aa17.39■□□□□ 0.37
AP004608.1-203ENST00000528482 ME1P48163 572 aa17.39■□□□□ 0.37
AP004608.1-203ENST00000528482 FAM193AP78312 1265 aa17.39■□□□□ 0.37
AP004608.1-203ENST00000528482 FAM160A1Q05DH4 1040 aa17.39■□□□□ 0.37
AP004608.1-203ENST00000528482 SCRN1Q12765 414 aa17.39■□□□□ 0.37
AP004608.1-203ENST00000528482 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms