RNA–Protein interactions for RNA: ENST00000527018.5

CTSC-204, Transcript of cathepsin C, human

TSL 5

Gene CTSC, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-204	ENST00000527018	GPRC5D	Q9NZD1	345 aa		13.8	□□□□□ -0.2
CTSC-204	ENST00000527018	ZNRF3	Q9ULT6	936 aa		13.8	□□□□□ -0.2
CTSC-204	ENST00000527018	SH3TC1	Q8TE82	1336 aa		13.8	□□□□□ -0.2
CTSC-204	ENST00000527018	TRAF5	O00463	557 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	GMPS	P49915	693 aa	Predicted RBP	13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	MAP2K1	Q02750	393 aa	Predicted RBP	13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	CXCL9	Q07325	125 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	GRAP	Q13588	217 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	CIAPIN1	Q6FI81	312 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	SP8	Q8IXZ3	490 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	GRAPL	Q8TC17	118 aa	Predicted RBP	13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	CAPNS2	Q96L46	248 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	BCL2L13	Q9BXK5	485 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	ADARB2	Q9NS39	739 aa	Known RBP	13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	CHPF2	Q9P2E5	772 aa		13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.79	□□□□□ -0.2
CTSC-204	ENST00000527018	LRRC37A	A6NMS7	1700 aa		13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	RAD17	O75943	681 aa		13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	ECE1	P42892	770 aa		13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	DDX10	Q13206	875 aa	Known RBP	13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	HDGFL1	Q5TGJ6	251 aa		13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	RUNDC1	Q96C34	613 aa		13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	BEGAIN	Q9BUH8	593 aa		13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	THSD7B	Q9C0I4	1608 aa		13.78	□□□□□ -0.2
CTSC-204	ENST00000527018	CHL1	O00533	1208 aa		13.77	□□□□□ -0.21
CTSC-204	ENST00000527018	HSPA8	P11142	646 aa	Known RBP	13.77	□□□□□ -0.21
CTSC-204	ENST00000527018	KIAA2012	Q0VF49	1180 aa		13.77	□□□□□ -0.21
CTSC-204	ENST00000527018	TNIP1	Q15025	636 aa		13.77	□□□□□ -0.21
CTSC-204	ENST00000527018	CYP4F22	Q6NT55	531 aa		13.77	□□□□□ -0.21
CTSC-204	ENST00000527018	RTL5	Q5HYW3	569 aa	Predicted RBP	13.76	□□□□□ -0.21
CTSC-204	ENST00000527018	PLBD2	Q8NHP8	589 aa		13.76	□□□□□ -0.21
CTSC-204	ENST00000527018	ZNF408	Q9H9D4	720 aa		13.76	□□□□□ -0.21
CTSC-204	ENST00000527018	DUOX1	Q9NRD9	1551 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	ATP5J2-PTCD1	G3V325	749 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	CELF2	O95319	508 aa	Known RBP	13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	CST9	Q5W186	159 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	ANKRD13D	Q6ZTN6	518 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	TMC4	Q7Z404	712 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	FAM89A	Q96GI7	184 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	GPR101	Q96P66	508 aa	Predicted RBP	13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	DBF4	Q9UBU7	674 aa	Predicted RBP	13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	TRIM35	Q9UPQ4	493 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	TLL2	Q9Y6L7	1015 aa		13.75	□□□□□ -0.21
CTSC-204	ENST00000527018	CASP8AP2	Q9UKL3	1982 aa		13.74	□□□□□ -0.21
CTSC-204	ENST00000527018	CDHR2	Q9BYE9	1310 aa		13.74	□□□□□ -0.21
CTSC-204	ENST00000527018	CNOT7	Q9UIV1	285 aa	Known RBP	13.74	□□□□□ -0.21
CTSC-204	ENST00000527018	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.74	□□□□□ -0.21
CTSC-204	ENST00000527018	YDJC	A8MPS7	323 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	C6orf229	H3BNL8	230 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018		H7C1D1	291 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	RIMBP2	O15034	1052 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	AOC2	O75106	756 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	HOXB7	P09629	217 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	WASHC4	Q2M389	1173 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	DUSP27	Q5VZP5	1158 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	TRPM4	Q8TD43	1214 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	CELF1	Q92879	486 aa	Known RBP	13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	DBNDD1	Q9H9R9	158 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	HYPK	Q9NX55	129 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	ADAMTS8	Q9UP79	889 aa		13.73	□□□□□ -0.21
CTSC-204	ENST00000527018	SHTN1	A0MZ66	631 aa		13.72	□□□□□ -0.21
CTSC-204	ENST00000527018	KCNA4	P22459	653 aa		13.72	□□□□□ -0.21
CTSC-204	ENST00000527018	MICALL2	Q8IY33	904 aa		13.72	□□□□□ -0.21
CTSC-204	ENST00000527018	ISCA1	Q9BUE6	129 aa		13.72	□□□□□ -0.21
CTSC-204	ENST00000527018	TSKS	Q9UJT2	592 aa		13.72	□□□□□ -0.21
CTSC-204	ENST00000527018	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.72	□□□□□ -0.21
CTSC-204	ENST00000527018	COL4A1	P02462	1669 aa		13.72	□□□□□ -0.21
CTSC-204	ENST00000527018	SPEF2	Q9C093	1822 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	SCN9A	Q15858	1988 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	PSMD14	O00487	310 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	IRS4	O14654	1257 aa	Predicted RBP	13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	HIRA	P54198	1017 aa	Predicted RBP	13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	GOLGA2	Q08379	1002 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	SF3B3	Q15393	1217 aa	Known RBP	13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	CDC37L1	Q7L3B6	337 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	RIC3	Q7Z5B4	369 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	SAPCD2	Q86UD0	394 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	ZC3H15	Q8WU90	426 aa	Known RBP	13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	ABHD8	Q96I13	439 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	CFAP44	Q96MT7	982 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	MBIP	Q9NS73	344 aa		13.71	□□□□□ -0.21
CTSC-204	ENST00000527018	MYH3	P11055	1940 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018		G3V3G9	751 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018	GPSM2	P81274	684 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018	DOK7	Q18PE1	504 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018	DCAF8	Q5TAQ9	597 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018	USP48	Q86UV5	1035 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018	EYA3	Q99504	573 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018	PGAP2	Q9UHJ9	254 aa		13.7	□□□□□ -0.22
CTSC-204	ENST00000527018	AKAP11	Q9UKA4	1901 aa		13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	ELL2	O00472	640 aa	Predicted RBP	13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	ECE2	O60344	883 aa		13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	MAP2K2	P36507	400 aa		13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	RBM26	Q5T8P6	1007 aa	Known RBP	13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	SAMD7	Q7Z3H4	446 aa		13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	PHAX	Q9H814	394 aa	Known RBP	13.69	□□□□□ -0.22
CTSC-204	ENST00000527018	POLL	Q9UGP5	575 aa		13.69	□□□□□ -0.22

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