RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 SLIT3O75094 1523 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 SKOR2Q2VWA4 1001 aaPredicted RBP11.7□□□□□ -0.54
USP35-201ENST00000526425 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 KIF2CQ99661 725 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
USP35-201ENST00000526425 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 PXDNQ92626 1479 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
USP35-201ENST00000526425 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 TLR7Q9NYK1 1049 aaKnown RBP11.69□□□□□ -0.54
USP35-201ENST00000526425 DDB1Q16531 1140 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
USP35-201ENST00000526425 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
USP35-201ENST00000526425 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 TTLL7Q6ZT98 887 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 LRRC2Q9BYS8 371 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 CYP46A1Q9Y6A2 500 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 LTN1O94822 1766 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 TFCP2Q12800 502 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 STARD3NLO95772 234 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 ACSBG1Q96GR2 724 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 MEGF6O75095 1541 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 GOLIM4O00461 696 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 TIMM10P62072 90 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
USP35-201ENST00000526425 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
USP35-201ENST00000526425 CEBPZQ03701 1054 aaKnown RBP11.67□□□□□ -0.54
USP35-201ENST00000526425 CCDC57Q2TAC2 916 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 GCKRQ14397 625 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 KIF6Q6ZMV9 814 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
USP35-201ENST00000526425 MED1Q15648 1581 aaPredicted RBP11.66□□□□□ -0.54
USP35-201ENST00000526425 SYCE3A1L190 88 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP35-201ENST00000526425 RGS12O14924 1447 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 NEURL1BA8MQ27 555 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 GTF2F1P35269 517 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP35-201ENST00000526425 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 IL25Q9H293 177 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 TERF1P54274 439 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 BLOC1S2Q6QNY1 142 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 DBNDD2Q9BQY9 259 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 RBM8AQ9Y5S9 174 aaKnown RBP11.65□□□□□ -0.54
USP35-201ENST00000526425 H3BQV1 296 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 MCM2P49736 904 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 PTH1RQ03431 593 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 IFFO2Q5TF58 517 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 FAM212AQ96EL1 285 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 FAM89AQ96GI7 184 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.55
USP35-201ENST00000526425 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 TBC1D2BQ9UPU7 963 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 AK2P54819 239 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 CWC25Q9NXE8 425 aaPredicted RBP11.64□□□□□ -0.55
USP35-201ENST00000526425 ADCY9O60503 1353 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 CALCOCO1Q9P1Z2 691 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 DRC1Q96MC2 740 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
USP35-201ENST00000526425 SGSM2O43147 1006 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 CDCA7Q9BWT1 371 aaPredicted RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 ZKSCAN5Q9Y2L8 839 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 TTC39AQ5SRH9 613 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 STRCP1A6NGW2 1772 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 HAND2P61296 217 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 SEC62Q99442 399 aaKnown RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 SNX14Q9Y5W7 946 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 IFIT1P09914 478 aaKnown RBP11.62□□□□□ -0.55
USP35-201ENST00000526425 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
USP35-201ENST00000526425 CHST3Q7LGC8 479 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
USP35-201ENST00000526425 CHGBP05060 677 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 CAPN2P17655 700 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms