RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 SLIT3O75094 1523 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 SKOR2Q2VWA4 1001 aaPredicted RBP11.7□□□□□ -0.54
USP35-201ENST00000526425 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 KIF2CQ99661 725 aa11.7□□□□□ -0.54
USP35-201ENST00000526425 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
USP35-201ENST00000526425 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 PXDNQ92626 1479 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
USP35-201ENST00000526425 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
USP35-201ENST00000526425 TLR7Q9NYK1 1049 aaKnown RBP11.69□□□□□ -0.54
USP35-201ENST00000526425 DDB1Q16531 1140 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
USP35-201ENST00000526425 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
USP35-201ENST00000526425 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 TTLL7Q6ZT98 887 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 LRRC2Q9BYS8 371 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 CYP46A1Q9Y6A2 500 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 LTN1O94822 1766 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 TFCP2Q12800 502 aa11.68□□□□□ -0.54
USP35-201ENST00000526425 STARD3NLO95772 234 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 ACSBG1Q96GR2 724 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 MEGF6O75095 1541 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 GOLIM4O00461 696 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 TIMM10P62072 90 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
USP35-201ENST00000526425 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
USP35-201ENST00000526425 CEBPZQ03701 1054 aaKnown RBP11.67□□□□□ -0.54
USP35-201ENST00000526425 CCDC57Q2TAC2 916 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
USP35-201ENST00000526425 GCKRQ14397 625 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 KIF6Q6ZMV9 814 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
USP35-201ENST00000526425 MED1Q15648 1581 aaPredicted RBP11.66□□□□□ -0.54
USP35-201ENST00000526425 SYCE3A1L190 88 aa11.66□□□□□ -0.54
USP35-201ENST00000526425 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP35-201ENST00000526425 RGS12O14924 1447 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 NEURL1BA8MQ27 555 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 GTF2F1P35269 517 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP35-201ENST00000526425 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 IL25Q9H293 177 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 TERF1P54274 439 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 BLOC1S2Q6QNY1 142 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 DBNDD2Q9BQY9 259 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.54
USP35-201ENST00000526425 RBM8AQ9Y5S9 174 aaKnown RBP11.65□□□□□ -0.54
USP35-201ENST00000526425 H3BQV1 296 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 MCM2P49736 904 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 PTH1RQ03431 593 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 IFFO2Q5TF58 517 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 FAM212AQ96EL1 285 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 FAM89AQ96GI7 184 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.55
USP35-201ENST00000526425 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 TBC1D2BQ9UPU7 963 aa11.65□□□□□ -0.55
USP35-201ENST00000526425 AK2P54819 239 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 CWC25Q9NXE8 425 aaPredicted RBP11.64□□□□□ -0.55
USP35-201ENST00000526425 ADCY9O60503 1353 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 CALCOCO1Q9P1Z2 691 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 DRC1Q96MC2 740 aa11.64□□□□□ -0.55
USP35-201ENST00000526425 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
USP35-201ENST00000526425 SGSM2O43147 1006 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 CDCA7Q9BWT1 371 aaPredicted RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 ZKSCAN5Q9Y2L8 839 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 TTC39AQ5SRH9 613 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 STRCP1A6NGW2 1772 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 HAND2P61296 217 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 SEC62Q99442 399 aaKnown RBP11.63□□□□□ -0.55
USP35-201ENST00000526425 SNX14Q9Y5W7 946 aa11.63□□□□□ -0.55
USP35-201ENST00000526425 IFIT1P09914 478 aaKnown RBP11.62□□□□□ -0.55
USP35-201ENST00000526425 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
USP35-201ENST00000526425 CHST3Q7LGC8 479 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
USP35-201ENST00000526425 CHGBP05060 677 aa11.62□□□□□ -0.55
USP35-201ENST00000526425 CAPN2P17655 700 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms