RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SPDYE3A6NKU9 549 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 C1QTNF9BB2RNN3 333 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 TNFRSF10BO14763 440 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 LILRB5O75023 590 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 PTCD1O75127 700 aaKnown RBP7.21□□□□□ -1.26
CD44-219ENST00000525685 EGFRP00533 1210 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 SPATA31C1P0DKV0 1188 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 TARSP26639 723 aaKnown RBP7.21□□□□□ -1.26
CD44-219ENST00000525685 CHRNA4P43681 627 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 SUZ12Q15022 739 aaKnown RBP7.21□□□□□ -1.26
CD44-219ENST00000525685 FAM26DQ5JW98 314 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 KRT25Q7Z3Z0 450 aa7.21□□□□□ -1.26
CD44-219ENST00000525685 PPP1R15AO75807 674 aaPredicted RBP7.2□□□□□ -1.26
CD44-219ENST00000525685 SASH3O75995 380 aa7.2□□□□□ -1.26
CD44-219ENST00000525685 BRD2P25440 801 aaKnown RBP7.2□□□□□ -1.26
CD44-219ENST00000525685 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
CD44-219ENST00000525685 RGL4Q8IZJ4 473 aa7.2□□□□□ -1.26
CD44-219ENST00000525685 TRPM4Q8TD43 1214 aa7.2□□□□□ -1.26
CD44-219ENST00000525685 KCNMB2Q9Y691 235 aa7.2□□□□□ -1.26
CD44-219ENST00000525685 ZBTB42B2RXF5 422 aa7.19□□□□□ -1.26
CD44-219ENST00000525685 RARAP10276 462 aa7.19□□□□□ -1.26
CD44-219ENST00000525685 ATP2B4P23634 1241 aa7.19□□□□□ -1.26
CD44-219ENST00000525685 PRRT3Q5FWE3 981 aa7.19□□□□□ -1.26
CD44-219ENST00000525685 PSAPL1Q6NUJ1 521 aa7.19□□□□□ -1.26
CD44-219ENST00000525685 DHX32Q7L7V1 743 aaKnown RBP7.19□□□□□ -1.26
CD44-219ENST00000525685 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
CD44-219ENST00000525685 XYLBO75191 536 aa7.18□□□□□ -1.26
CD44-219ENST00000525685 BAG6P46379 1132 aa7.18□□□□□ -1.26
CD44-219ENST00000525685 GPLD1P80108 840 aa7.18□□□□□ -1.26
CD44-219ENST00000525685 PCSK7Q16549 785 aa7.18□□□□□ -1.26
CD44-219ENST00000525685 NUDT8Q8WV74 236 aa7.18□□□□□ -1.26
CD44-219ENST00000525685 JPH1Q9HDC5 661 aaPredicted RBP7.18□□□□□ -1.26
CD44-219ENST00000525685 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
CD44-219ENST00000525685 AFF1P51825 1210 aaKnown RBP7.17□□□□□ -1.26
CD44-219ENST00000525685 ILDR2Q71H61 639 aa7.17□□□□□ -1.26
CD44-219ENST00000525685 FAM35AQ86V20 835 aa7.17□□□□□ -1.26
CD44-219ENST00000525685 HOMEZQ8IX15 550 aa7.17□□□□□ -1.26
CD44-219ENST00000525685 TLR7Q9NYK1 1049 aaKnown RBP7.17□□□□□ -1.26
CD44-219ENST00000525685 RGS9O75916 674 aaPredicted RBP7.16□□□□□ -1.26
CD44-219ENST00000525685 CPB1P15086 417 aa7.16□□□□□ -1.26
CD44-219ENST00000525685 NRLP54845 237 aa7.16□□□□□ -1.26
CD44-219ENST00000525685 TRIM28Q13263 835 aaKnown RBP7.16□□□□□ -1.26
CD44-219ENST00000525685 TRIP4Q15650 581 aaPredicted RBP7.16□□□□□ -1.26
CD44-219ENST00000525685 PERM1Q5SV97 790 aa7.16□□□□□ -1.26
CD44-219ENST00000525685 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
CD44-219ENST00000525685 FRRS1LQ9P0K9 344 aa7.16□□□□□ -1.26
CD44-219ENST00000525685 STIM2Q9P246 746 aa7.16□□□□□ -1.26
CD44-219ENST00000525685 SEPT3Q9UH03 358 aa7.16□□□□□ -1.26
CD44-219ENST00000525685 TMEM88BA6NKF7 163 aa7.15□□□□□ -1.26
CD44-219ENST00000525685 ZBTB39O15060 712 aa7.15□□□□□ -1.26
CD44-219ENST00000525685 MLLT1Q03111 559 aaPredicted RBP7.15□□□□□ -1.26
CD44-219ENST00000525685 TRAPPC3LQ5T215 181 aa7.15□□□□□ -1.26
CD44-219ENST00000525685 A0A0A0MRY4 1105 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 MMP20O60882 483 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 ADAM23O75077 832 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 HOXD8P13378 290 aaPredicted RBP7.14□□□□□ -1.27
CD44-219ENST00000525685 ARID4AP29374 1257 aaPredicted RBP7.14□□□□□ -1.27
CD44-219ENST00000525685 ZAP70P43403 619 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 PLAURQ03405 335 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 GRIK5Q16478 980 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 PIK3R5Q8WYR1 880 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 FAM13BQ9NYF5 915 aa7.14□□□□□ -1.27
CD44-219ENST00000525685 PSAPP07602 524 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 SOX18P35713 384 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 PDE4CQ08493 712 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 GRIK4Q16099 956 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 ELMSAN1Q6PJG2 1045 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 HFE2Q6ZVN8 426 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 NLRP13Q86W25 1043 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 ABTB2Q8N961 1025 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 TTC9Q92623 222 aa7.13□□□□□ -1.27
CD44-219ENST00000525685 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 APBA3O96018 575 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 SSFA2P28290 1259 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 SCNN1AP37088 669 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 GATA4P43694 442 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 MSL1Q68DK7 614 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 DMRTC2Q8IXT2 367 aaPredicted RBP7.12□□□□□ -1.27
CD44-219ENST00000525685 GPR152Q8TDT2 470 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
CD44-219ENST00000525685 LOC102724428A0A0B4J2F2 783 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 J3QW42 95 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 FURINP09958 794 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 ELNP15502 786 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 EIF2AK2P19525 551 aaKnown RBP7.11□□□□□ -1.27
CD44-219ENST00000525685 SIK1P57059 783 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 RAC1P63000 192 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 FMR1NBQ8N0W7 255 aaPredicted RBP7.11□□□□□ -1.27
CD44-219ENST00000525685 HELQQ8TDG4 1101 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 NSUN5Q96P11 429 aaKnown RBP7.11□□□□□ -1.27
CD44-219ENST00000525685 NACC1Q96RE7 527 aa7.11□□□□□ -1.27
CD44-219ENST00000525685 SMG9Q9H0W8 520 aaKnown RBP7.11□□□□□ -1.27
CD44-219ENST00000525685 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
CD44-219ENST00000525685 PDIA4P13667 645 aaKnown RBP7.1□□□□□ -1.27
CD44-219ENST00000525685 SELPP16109 830 aa7.1□□□□□ -1.27
CD44-219ENST00000525685 DOC2BQ14184 412 aa7.09□□□□□ -1.27
CD44-219ENST00000525685 ATCAYQ86WG3 371 aa7.09□□□□□ -1.27
CD44-219ENST00000525685 DTWD1Q8N5C7 304 aa7.09□□□□□ -1.27
CD44-219ENST00000525685 OR13H1Q8NG92 308 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms