RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PLA2G4DQ86XP0 818 aa15.57■□□□□ 0.08
CAPN1-202ENST00000524773 CCDC112Q8NEF3 446 aa15.57■□□□□ 0.08
CAPN1-202ENST00000524773 MAP4K1Q92918 833 aa15.57■□□□□ 0.08
CAPN1-202ENST00000524773 SUCLG2Q96I99 432 aa15.57■□□□□ 0.08
CAPN1-202ENST00000524773 RGPD1P0DJD0 1748 aa15.56■□□□□ 0.08
CAPN1-202ENST00000524773 BICC1Q9H694 974 aaKnown RBP15.56■□□□□ 0.08
CAPN1-202ENST00000524773 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
CAPN1-202ENST00000524773 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
CAPN1-202ENST00000524773 TTC21AQ8NDW8 1320 aa15.56■□□□□ 0.08
CAPN1-202ENST00000524773 NBPF6Q5VWK0 638 aa15.56■□□□□ 0.08
CAPN1-202ENST00000524773 EVI5LQ96CN4 794 aa15.56■□□□□ 0.08
CAPN1-202ENST00000524773 NBPF4Q96M43 638 aa15.56■□□□□ 0.08
CAPN1-202ENST00000524773 CLSTN2Q9H4D0 955 aa15.56■□□□□ 0.08
CAPN1-202ENST00000524773 ZNF215Q9UL58 517 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-202ENST00000524773 A0A0G2JLW4 131 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 BTBD11A6QL63 1104 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 FAM208AQ9UK61 1670 aaKnown RBP15.55■□□□□ 0.08
CAPN1-202ENST00000524773 RPS6KB1P23443 525 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 CEP135Q66GS9 1140 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 CHST3Q7LGC8 479 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 ZBTB9Q96C00 473 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 KAZALD1Q96I82 304 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 GTPBP4Q9BZE4 634 aaKnown RBP15.55■□□□□ 0.08
CAPN1-202ENST00000524773 TTC41PQ6P2S7 1318 aa15.55■□□□□ 0.08
CAPN1-202ENST00000524773 H3BQV1 296 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 IFFO2Q5TF58 517 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 ZNF142P52746 1687 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-202ENST00000524773 CCT2P78371 535 aaKnown RBP15.54■□□□□ 0.08
CAPN1-202ENST00000524773 GOLPH3LQ9H4A5 285 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 SMTNL1A8MU46 457 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 TEFQ10587 303 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-202ENST00000524773 LRRN4CLQ8ND94 238 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 TM6SF1Q9BZW5 370 aa15.54■□□□□ 0.08
CAPN1-202ENST00000524773 TPM3P06753 285 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 Q6ZUG5 572 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 DNAJC2Q99543 621 aaKnown RBP15.53■□□□□ 0.08
CAPN1-202ENST00000524773 NCOA5Q9HCD5 579 aaKnown RBP15.53■□□□□ 0.08
CAPN1-202ENST00000524773 ERICH4A6NGS2 130 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
CAPN1-202ENST00000524773 SKILP12757 684 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 FGD1P98174 961 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 ELF2Q15723 593 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 GPATCH3Q96I76 525 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
CAPN1-202ENST00000524773 SCAND2PQ9GZW5 306 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-202ENST00000524773 GOLGA6L19H0YKK7 550 aa15.52■□□□□ 0.08
CAPN1-202ENST00000524773 EPB41L2O43491 1005 aaKnown RBP15.52■□□□□ 0.08
CAPN1-202ENST00000524773 MYL6BP14649 208 aa15.52■□□□□ 0.08
CAPN1-202ENST00000524773 G3BP1Q13283 466 aaKnown RBP eCLIP15.52■□□□□ 0.083e-6■■■□□ 16
CAPN1-202ENST00000524773 KMT5BQ4FZB7 885 aa15.52■□□□□ 0.08
CAPN1-202ENST00000524773 HSP90AB4PQ58FF6 505 aa15.52■□□□□ 0.08
CAPN1-202ENST00000524773 LRRC8AQ8IWT6 810 aa15.52■□□□□ 0.08
CAPN1-202ENST00000524773 NPHP3Q7Z494 1330 aa15.52■□□□□ 0.08
CAPN1-202ENST00000524773 COL15A1P39059 1388 aa15.52■□□□□ 0.08
CAPN1-202ENST00000524773 ISM2Q6H9L7 571 aa15.52■□□□□ 0.07
CAPN1-202ENST00000524773 TDRD7Q8NHU6 1098 aaKnown RBP15.52■□□□□ 0.07
CAPN1-202ENST00000524773 EPHA10Q5JZY3 1008 aa15.51■□□□□ 0.07
CAPN1-202ENST00000524773 RAB11FIP4Q86YS3 637 aa15.51■□□□□ 0.07
CAPN1-202ENST00000524773 OTUD7BQ6GQQ9 843 aa15.51■□□□□ 0.07
CAPN1-202ENST00000524773 ZNF530Q6P9A1 599 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-202ENST00000524773 CCAR1Q8IX12 1150 aaKnown RBP15.51■□□□□ 0.07
CAPN1-202ENST00000524773 DDX19AQ9NUU7 478 aaKnown RBP15.51■□□□□ 0.07
CAPN1-202ENST00000524773 TOPAZ1Q8N9V7 1692 aa15.51■□□□□ 0.07
CAPN1-202ENST00000524773 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
CAPN1-202ENST00000524773 PSMA5P28066 241 aa15.51■□□□□ 0.07
CAPN1-202ENST00000524773 OGFRQ9NZT2 677 aa15.51■□□□□ 0.07
CAPN1-202ENST00000524773 NPHP4O75161 1426 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-202ENST00000524773 ELP1O95163 1332 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 PDCP20941 246 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 RESTQ13127 1097 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 IQCB1Q15051 598 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 KCNB2Q92953 911 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 USP42Q9H9J4 1324 aaKnown RBP15.5■□□□□ 0.07
CAPN1-202ENST00000524773 BECN2A8MW95 431 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 BIN1O00499 593 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 SCRN1Q12765 414 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 SLC39A6Q13433 755 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 DDX46Q7L014 1031 aaKnown RBP15.5■□□□□ 0.07
CAPN1-202ENST00000524773 AOPEPQ8N6M6 819 aa15.5■□□□□ 0.07
CAPN1-202ENST00000524773 GORABQ5T7V8 394 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 NALCNQ8IZF0 1738 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 TAF5LO75529 589 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 APOBRQ0VD83 1088 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 PTPN14Q15678 1187 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 FBXO38Q6PIJ6 1188 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 TRERF1Q96PN7 1200 aa15.49■□□□□ 0.07
CAPN1-202ENST00000524773 RGPD8O14715 1765 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-202ENST00000524773 USP28Q96RU2 1077 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 GJB4Q9NTQ9 266 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 DDX41Q9UJV9 622 aaKnown RBP15.48■□□□□ 0.07
CAPN1-202ENST00000524773 GTF3C6Q969F1 213 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 CHD2O14647 1828 aaKnown RBP15.48■□□□□ 0.07
CAPN1-202ENST00000524773 CYP21A2P08686 494 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 RNF20Q5VTR2 975 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 STOX1Q6ZVD7 989 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 NEK1Q96PY6 1258 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms