RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	KNSTRN	Q9Y448	316 aa		10.94	□□□□□ -0.66
PTK2-253	ENST00000523805	CIC	Q96RK0	1608 aa	Predicted RBP	10.94	□□□□□ -0.66
PTK2-253	ENST00000523805	KIF7	Q2M1P5	1343 aa		10.93	□□□□□ -0.66
PTK2-253	ENST00000523805	FMNL1	O95466	1100 aa	Predicted RBP	10.93	□□□□□ -0.66
PTK2-253	ENST00000523805	RPIA	P49247	311 aa		10.93	□□□□□ -0.66
PTK2-253	ENST00000523805	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.93	□□□□□ -0.66
PTK2-253	ENST00000523805	ZNF787	Q6DD87	383 aa		10.93	□□□□□ -0.66
PTK2-253	ENST00000523805	KIAA1551	Q9HCM1	1747 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	KDR	P35968	1356 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	ZNF831	Q5JPB2	1677 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	CABP4	P57796	275 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	MAP2K5	Q13163	448 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	C1orf141	Q5JVX7	400 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	SULT6B1	Q6IMI4	303 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	PKD2L1	Q9P0L9	805 aa		10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	FCF1	Q9Y324	198 aa	Known RBP	10.92	□□□□□ -0.66
PTK2-253	ENST00000523805	KIF13B	Q9NQT8	1826 aa		10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	SENP3-EIF4A1	A0A087X0R7	540 aa		10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	PTCD1	O75127	700 aa	Known RBP	10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	HMOX1	P09601	288 aa		10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	SSFA2	P28290	1259 aa		10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	CC2D1B	Q5T0F9	858 aa	Known RBP	10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	BRICD5	Q6PL45	260 aa		10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	PRDM9	Q9NQV7	894 aa		10.91	□□□□□ -0.66
PTK2-253	ENST00000523805	FAM187A	A6NFU0	413 aa		10.9	□□□□□ -0.66
PTK2-253	ENST00000523805	MTHFS	P49914	203 aa		10.9	□□□□□ -0.66
PTK2-253	ENST00000523805	MSS51	Q4VC12	460 aa		10.9	□□□□□ -0.66
PTK2-253	ENST00000523805	ZNF526	Q8TF50	670 aa	Predicted RBP	10.9	□□□□□ -0.66
PTK2-253	ENST00000523805	DCAF5	Q96JK2	942 aa		10.9	□□□□□ -0.66
PTK2-253	ENST00000523805	SLC4A9	Q96Q91	983 aa		10.9	□□□□□ -0.66
PTK2-253	ENST00000523805	GIGYF1	O75420	1035 aa	Predicted RBP	10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	HSP90AB1	P08238	724 aa	Known RBP	10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	MMP10	P09238	476 aa		10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	CD46	P15529	392 aa		10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	RNF19B	Q6ZMZ0	732 aa		10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	RTCB	Q9Y3I0	505 aa	Known RBP	10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	CD2AP	Q9Y5K6	639 aa		10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	ATP10D	Q9P241	1426 aa		10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	BRCA1	P38398	1863 aa	Known RBP	10.89	□□□□□ -0.67
PTK2-253	ENST00000523805	ERVV-2	B6SEH9	535 aa		10.88	□□□□□ -0.67
PTK2-253	ENST00000523805	GRIN3B	O60391	1043 aa		10.88	□□□□□ -0.67
PTK2-253	ENST00000523805	HMGB2	P26583	209 aa	Known RBP	10.88	□□□□□ -0.67
PTK2-253	ENST00000523805	AMOT	Q4VCS5	1084 aa		10.88	□□□□□ -0.67
PTK2-253	ENST00000523805	IL13	P35225	146 aa		10.87	□□□□□ -0.67
PTK2-253	ENST00000523805	C1QTNF8	P60827	252 aa		10.87	□□□□□ -0.67
PTK2-253	ENST00000523805	TRAPPC3L	Q5T215	181 aa		10.87	□□□□□ -0.67
PTK2-253	ENST00000523805	NFATC2IP	Q8NCF5	419 aa		10.87	□□□□□ -0.67
PTK2-253	ENST00000523805	PXDNL	A1KZ92	1463 aa		10.87	□□□□□ -0.67
PTK2-253	ENST00000523805	AFDN	P55196	1824 aa	Known RBP	10.86	□□□□□ -0.67
PTK2-253	ENST00000523805	UBR2	Q8IWV8	1755 aa		10.86	□□□□□ -0.67
PTK2-253	ENST00000523805	GRIPAP1	Q4V328	841 aa		10.86	□□□□□ -0.67
PTK2-253	ENST00000523805	SRP68	Q9UHB9	627 aa	Known RBP	10.86	□□□□□ -0.67
PTK2-253	ENST00000523805	PLEKHG2	Q9H7P9	1386 aa		10.86	□□□□□ -0.67
PTK2-253	ENST00000523805	ADAMTS7	Q9UKP4	1686 aa		10.85	□□□□□ -0.67
PTK2-253	ENST00000523805	CNTNAP4	Q9C0A0	1308 aa		10.85	□□□□□ -0.67
PTK2-253	ENST00000523805	IRF6	O14896	467 aa		10.85	□□□□□ -0.67
PTK2-253	ENST00000523805	RFC4	P35249	363 aa		10.85	□□□□□ -0.67
PTK2-253	ENST00000523805	CRKL	P46109	303 aa	Known RBP	10.85	□□□□□ -0.67
PTK2-253	ENST00000523805	ARFGEF1	Q9Y6D6	1849 aa		10.85	□□□□□ -0.67
PTK2-253	ENST00000523805	CACNA1S	Q13698	1873 aa		10.85	□□□□□ -0.67
PTK2-253	ENST00000523805	C10orf71	Q711Q0	1435 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	U2SURP	O15042	1029 aa	Known RBP	10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	FOXC1	Q12948	553 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	SLC39A6	Q13433	755 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	LGR6	Q9HBX8	967 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	TOR4A	Q9NXH8	423 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	BCS1L	Q9Y276	419 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	MRC1	P22897	1456 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	SIPA1L3	O60292	1781 aa	Predicted RBP	10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	KCP	Q6ZWJ8	1503 aa		10.84	□□□□□ -0.67
PTK2-253	ENST00000523805	COL3A1	P02461	1466 aa	Predicted RBP	10.83	□□□□□ -0.68
PTK2-253	ENST00000523805		A0A0G2JLW4	131 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	DIAPH1	O60610	1272 aa	Known RBP	10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	RPS6KA4	O75676	772 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	GYS1	P13807	737 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805		Q3C1V9	767 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	DNAJC10	Q8IXB1	793 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	VSIG10	Q8N0Z9	540 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	ZNF775	Q96BV0	537 aa	Predicted RBP	10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	PARP3	Q9Y6F1	533 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	UTRN	P46939	3433 aa		10.83	□□□□□ -0.68
PTK2-253	ENST00000523805	RNMT	O43148	476 aa	Known RBP	10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	CD2BP2	O95400	341 aa	Known RBP	10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	MMP16	P51512	607 aa		10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	MTHFSD	Q2M296	383 aa	Known RBP	10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	AKAP4	Q5JQC9	854 aa		10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	CRIPAK	Q8N1N5	446 aa		10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	SLC52A2	Q9HAB3	445 aa		10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	AAAS	Q9NRG9	546 aa		10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	CCDC87	Q9NVE4	849 aa		10.82	□□□□□ -0.68
PTK2-253	ENST00000523805	ADCY9	O60503	1353 aa		10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	CCDC88A	Q3V6T2	1871 aa		10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	POTEC	B2RU33	542 aa		10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	TULP1	O00294	542 aa	Predicted RBP	10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	ST8SIA5	O15466	376 aa		10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	KDM4A	O75164	1064 aa		10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	DPEP1	P16444	411 aa		10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	RC3H1	Q5TC82	1133 aa	Known RBP	10.81	□□□□□ -0.68
PTK2-253	ENST00000523805	NLGN1	Q8N2Q7	840 aa		10.81	□□□□□ -0.68

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