RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 TARSP26639 723 aaKnown RBP4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 TNP2Q05952 138 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 ZNF326Q5BKZ1 582 aaKnown RBP4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 SAMD5Q5TGI4 173 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 FAM9AQ8IZU1 332 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 VWA5B2Q8N398 1253 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 C1orf127Q8N9H9 656 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 CHRDQ9H2X0 955 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 SENP2Q9HC62 589 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 FAM13BQ9NYF5 915 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 ZFATQ9P243 1243 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 KANSL3Q9P2N6 904 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 KCNH4Q9UQ05 1017 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 PCDHGC4Q9Y5F7 938 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 SMARCA4P51532 1647 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 PPFIA3O75145 1194 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 PHACTR2O75167 634 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 RECKO95980 971 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 FAM157BP0CG42 384 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 ACPPP15309 386 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 NFKB1P19838 968 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 COL19A1Q14993 1142 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 TSNAXIP1Q2TAA8 658 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 TRIM22Q8IYM9 498 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 EPS8L3Q8TE67 593 aaKnown RBP4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 KIFC2Q96AC6 838 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 GSX2Q9BZM3 304 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 LATS2Q9NRM7 1088 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 NDFIP2Q9NV92 336 aa4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 BAZ1AQ9NRL2 1556 aaPredicted RBP4.31□□□□□ -1.72
CKS1BP7-201ENST00000522230 MMP20O60882 483 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 CPNE3O75131 537 aaKnown RBP4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 PRPF40AO75400 957 aaKnown RBP4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 EPB42P16452 691 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 CTBSQ01459 385 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 ATP2B2Q01814 1243 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 SPEM2Q0P670 501 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 COL13A1Q5TAT6 717 aaPredicted RBP4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 NLRP13Q86W25 1043 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 SNX29Q8TEQ0 813 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 BHMTQ93088 406 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 CCDC74AQ96AQ1 378 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 ZFYVE28Q9HCC9 887 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 NPHS2Q9NP85 383 aa4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 FNDC3AQ9Y2H6 1198 aaKnown RBP4.3□□□□□ -1.72
CKS1BP7-201ENST00000522230 H7C1W4 665 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 TRPA1O75762 1119 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 RPLP1P05386 114 aaKnown RBP4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 RARAP10276 462 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 KCNQ4P56696 695 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 XPCQ01831 940 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 MLLT1Q03111 559 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 TBC1D8BQ0IIM8 1120 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 PSMD2Q13200 908 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 CCINQ13939 588 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 MRPL58Q14197 206 aaKnown RBP4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 LDLRAD1Q5T700 205 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 C9orf131Q5VYM1 1079 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 PDE12Q6L8Q7 609 aaKnown RBP4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 FIGNL1Q6PIW4 674 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 XKR5Q6UX68 686 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 BACH2Q9BYV9 841 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 ABI2Q9NYB9 513 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 MARK1Q9P0L2 795 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 VTI1BQ9UEU0 232 aa4.29□□□□□ -1.72
CKS1BP7-201ENST00000522230 C2CD2LO14523 706 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 EGFRP00533 1210 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 FGFR3P22607 806 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 CES1P23141 567 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 DAB2P98082 770 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 LBRQ14739 615 aaKnown RBP4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 TTC39BQ5VTQ0 682 aaPredicted RBP4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 ALG1LQ6GMV1 187 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 HFE2Q6ZVN8 426 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 GPR161Q8N6U8 529 aaKnown RBP4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 NSUN5Q96P11 429 aaKnown RBP4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 PNMA5Q96PV4 448 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 OSBPL7Q9BZF2 842 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 IGFLR1Q9H665 355 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 IGSF5Q9NSI5 407 aa4.28□□□□□ -1.72
CKS1BP7-201ENST00000522230 LOC105371045A0A1W2PR82 267 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 CTSHP09668 335 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 GAS6Q14393 721 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 NXPE4Q6UWF7 544 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 TMC4Q7Z404 712 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 HHIPQ96QV1 700 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 DNAJC25Q9H1X3 360 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 MRS2Q9HD23 443 aa4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 ATXN7L1Q9ULK2 861 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP7-201ENST00000522230 TOP2AP11388 1531 aaKnown RBP4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 CCDC88BA6NC98 1476 aa4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 A0A1W2PP55 124 aa4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 ZBTB42B2RXF5 422 aa4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 J3QW42 95 aa4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 SORBS3O60504 671 aa4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 GADD45BO75293 160 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 GNA15P30679 374 aa4.26□□□□□ -1.73
CKS1BP7-201ENST00000522230 PCBP4P57723 403 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms