RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 CRAMP1Q96RY5 1269 aa15.77■□□□□ 0.12
HDAC2-211ENST00000521233 PLA2G12BQ9BX93 195 aa15.77■□□□□ 0.12
HDAC2-211ENST00000521233 UTYO14607 1347 aa15.76■□□□□ 0.11
HDAC2-211ENST00000521233 INTS3Q68E01 1043 aaKnown RBP15.76■□□□□ 0.11
HDAC2-211ENST00000521233 C3orf67Q6ZVT6 689 aa15.76■□□□□ 0.11
HDAC2-211ENST00000521233 HDAC5Q9UQL6 1122 aa15.76■□□□□ 0.11
HDAC2-211ENST00000521233 CACNA1SQ13698 1873 aa15.76■□□□□ 0.11
HDAC2-211ENST00000521233 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
HDAC2-211ENST00000521233 YBX3P16989 372 aaKnown RBP eCLIP15.75■□□□□ 0.11
HDAC2-211ENST00000521233 CASP7P55210 303 aa15.75■□□□□ 0.11
HDAC2-211ENST00000521233 TMC4Q7Z404 712 aa15.75■□□□□ 0.11
HDAC2-211ENST00000521233 WWC3Q9ULE0 1092 aa15.75■□□□□ 0.11
HDAC2-211ENST00000521233 DZIP1LQ8IYY4 767 aaKnown RBP15.74■□□□□ 0.11
HDAC2-211ENST00000521233 GRAPQ13588 217 aa15.73■□□□□ 0.11
HDAC2-211ENST00000521233 GRIPAP1Q4V328 841 aa15.73■□□□□ 0.11
HDAC2-211ENST00000521233 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
HDAC2-211ENST00000521233 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
HDAC2-211ENST00000521233 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
HDAC2-211ENST00000521233 CLUAP1Q96AJ1 413 aa15.73■□□□□ 0.11
HDAC2-211ENST00000521233 TMX4Q9H1E5 349 aaPredicted RBP15.73■□□□□ 0.11
HDAC2-211ENST00000521233 SLX4Q8IY92 1834 aa15.73■□□□□ 0.11
HDAC2-211ENST00000521233 PPEF1O14829 653 aaPredicted RBP15.72■□□□□ 0.11
HDAC2-211ENST00000521233 BBOX1O75936 387 aa15.72■□□□□ 0.11
HDAC2-211ENST00000521233 GNAI3P08754 354 aa15.72■□□□□ 0.11
HDAC2-211ENST00000521233 UBTFL1P0CB47 393 aaPredicted RBP15.72■□□□□ 0.11
HDAC2-211ENST00000521233 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
HDAC2-211ENST00000521233 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
HDAC2-211ENST00000521233 TTLL11Q8NHH1 800 aa15.72■□□□□ 0.11
HDAC2-211ENST00000521233 CDC5LQ99459 802 aaKnown RBP15.72■□□□□ 0.11
HDAC2-211ENST00000521233 NBPF7P0C2Y1 421 aaPredicted RBP15.71■□□□□ 0.11
HDAC2-211ENST00000521233 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
HDAC2-211ENST00000521233 LRRC37AA6NMS7 1700 aa15.71■□□□□ 0.1
HDAC2-211ENST00000521233 C21orf2O43822 256 aa15.7■□□□□ 0.1
HDAC2-211ENST00000521233 TMEM57Q8N5G2 664 aa15.7■□□□□ 0.1
HDAC2-211ENST00000521233 CSF1RP07333 972 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 FOXO4P98177 505 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 ITPRIPQ8IWB1 547 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 RTKN2Q8IZC4 609 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 C7orf43Q8WVR3 580 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 SUCLG2Q96I99 432 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
HDAC2-211ENST00000521233 TNNQ9UQP3 1299 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 ATP6V0A2Q9Y487 856 aa15.69■□□□□ 0.1
HDAC2-211ENST00000521233 LTBP3Q9NS15 1303 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 FER1L6Q2WGJ9 1857 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 RPS8P62241 208 aaKnown RBP15.68■□□□□ 0.1
HDAC2-211ENST00000521233 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
HDAC2-211ENST00000521233 PDE3AQ14432 1141 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 FAM161AQ3B820 660 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 RABL6Q3YEC7 729 aaPredicted RBP15.68■□□□□ 0.1
HDAC2-211ENST00000521233 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 ANKRD18AQ8IVF6 992 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
HDAC2-211ENST00000521233 MEIS3Q99687 375 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 CHMP4BQ9H444 224 aaKnown RBP15.68■□□□□ 0.1
HDAC2-211ENST00000521233 GREM2Q9H772 168 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
HDAC2-211ENST00000521233 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
HDAC2-211ENST00000521233 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
HDAC2-211ENST00000521233 RLBP1P12271 317 aa15.67■□□□□ 0.1
HDAC2-211ENST00000521233 ITGA6P23229 1130 aa15.67■□□□□ 0.1
HDAC2-211ENST00000521233 IGHMBP2P38935 993 aaKnown RBP15.67■□□□□ 0.1
HDAC2-211ENST00000521233 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
HDAC2-211ENST00000521233 SP8Q8IXZ3 490 aa15.67■□□□□ 0.1
HDAC2-211ENST00000521233 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
HDAC2-211ENST00000521233 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
HDAC2-211ENST00000521233 BICC1Q9H694 974 aaKnown RBP15.67■□□□□ 0.1
HDAC2-211ENST00000521233 CHD4Q14839 1912 aa15.66■□□□□ 0.1
HDAC2-211ENST00000521233 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
HDAC2-211ENST00000521233 DDX19BQ9UMR2 479 aa15.66■□□□□ 0.1
HDAC2-211ENST00000521233 SNED1Q8TER0 1413 aa15.66■□□□□ 0.1
HDAC2-211ENST00000521233 GNAI2P04899 355 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 RRP1P56182 461 aaKnown RBP15.65■□□□□ 0.1
HDAC2-211ENST00000521233 FKBP4Q02790 459 aaKnown RBP eCLIP15.65■□□□□ 0.1
HDAC2-211ENST00000521233 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
HDAC2-211ENST00000521233 TAF7LQ5H9L4 462 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 EPHA10Q5JZY3 1008 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 ANKRD44Q8N8A2 993 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 PANK1Q8TE04 598 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 KAZALD1Q96I82 304 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 PSMD1Q99460 953 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 TAF1P21675 1872 aa15.65■□□□□ 0.1
HDAC2-211ENST00000521233 GOLGB1Q14789 3259 aaKnown RBP15.64■□□□□ 0.09
HDAC2-211ENST00000521233 COL4A1P02462 1669 aa15.64■□□□□ 0.09
HDAC2-211ENST00000521233 SPEF2Q9C093 1822 aa15.64■□□□□ 0.09
HDAC2-211ENST00000521233 NFKBIEO00221 500 aa15.64■□□□□ 0.09
HDAC2-211ENST00000521233 PLIN1O60240 522 aa15.64■□□□□ 0.09
HDAC2-211ENST00000521233 SUPT20HQ8NEM7 779 aa15.64■□□□□ 0.09
HDAC2-211ENST00000521233 MPHOSPH8Q99549 860 aa15.64■□□□□ 0.09
HDAC2-211ENST00000521233 BSDC1Q9NW68 430 aaPredicted RBP15.64■□□□□ 0.09
HDAC2-211ENST00000521233 LRRFIP2Q9Y608 721 aaKnown RBP15.64■□□□□ 0.09
HDAC2-211ENST00000521233 LMNB1P20700 586 aa15.63■□□□□ 0.09
HDAC2-211ENST00000521233 RASSF7Q02833 373 aa15.63■□□□□ 0.09
HDAC2-211ENST00000521233 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
HDAC2-211ENST00000521233 ZC3H4Q9UPT8 1303 aaKnown RBP15.63■□□□□ 0.09
HDAC2-211ENST00000521233 OLFM4Q6UX06 510 aa15.62■□□□□ 0.09
HDAC2-211ENST00000521233 MPNDQ8N594 471 aa15.62■□□□□ 0.09
HDAC2-211ENST00000521233 LTBP1Q14766 1721 aa15.62■□□□□ 0.09
HDAC2-211ENST00000521233 XDHP47989 1333 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms