RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 HNRNPMP52272 730 aaKnown RBP eCLIP17.56■□□□□ 0.47e-7■■■□□ 19
UBR5-207ENST00000520539 AKR1B10O60218 316 aa17.56■□□□□ 0.4
UBR5-207ENST00000520539 TERF1P54274 439 aa17.56■□□□□ 0.4
UBR5-207ENST00000520539 RUFY4Q6ZNE9 571 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 ATP2A3Q93084 1043 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 CRCPO75575 148 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 KLHL40Q2TBA0 621 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 CNNM3Q8NE01 707 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 HAUS2Q9NVX0 235 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 ACTN4O43707 911 aaKnown RBP17.55■□□□□ 0.4
UBR5-207ENST00000520539 FCHSD2O94868 740 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 LRRC43Q8N309 656 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 CCT6BQ92526 530 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 CALML4Q96GE6 196 aa17.55■□□□□ 0.4
UBR5-207ENST00000520539 SYF2O95926 243 aaKnown RBP17.55■□□□□ 0.4
UBR5-207ENST00000520539 PAWRQ96IZ0 340 aaKnown RBP17.55■□□□□ 0.4
UBR5-207ENST00000520539 ZNF165P49910 485 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 E9PMD0 336 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 DEUP1Q05D60 604 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 GSTA5Q7RTV2 222 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
UBR5-207ENST00000520539 A0A1B0GW55 424 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 HIP1RO75146 1068 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
UBR5-207ENST00000520539 DUX4L2P0CJ85 424 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 DUX4L3P0CJ86 424 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 DUX4L4P0CJ87 422 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 DUX4L5P0CJ88 424 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 DUX4L6P0CJ89 424 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 DUX4L7P0CJ90 424 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 INF2Q27J81 1249 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 DUX4Q9UBX2 424 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 KRT13P13646 458 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 PFDN4Q9NQP4 134 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 PALM3A6NDB9 673 aaPredicted RBP17.54■□□□□ 0.4
UBR5-207ENST00000520539 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
UBR5-207ENST00000520539 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 LRRD1A4D1F6 860 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 CCDC26Q8TAB7 109 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 RPGRIP1Q96KN7 1286 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 NRBF2Q96F24 287 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 TCP11L1Q9NUJ3 509 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 ERCC5P28715 1186 aaPredicted RBP17.53■□□□□ 0.4
UBR5-207ENST00000520539 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
UBR5-207ENST00000520539 GOLGA6CA6NDK9 693 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 GOLGA6DP0CG33 693 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 MICAL1Q8TDZ2 1067 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 CCDC124Q96CT7 223 aaKnown RBP17.53■□□□□ 0.4
UBR5-207ENST00000520539 GOLGA6AQ9NYA3 693 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 SDCCAG3Q96C92 435 aa17.53■□□□□ 0.4
UBR5-207ENST00000520539 TRMT1Q9NXH9 659 aaKnown RBP17.53■□□□□ 0.4
UBR5-207ENST00000520539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBR5-207ENST00000520539 APAF1O14727 1248 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.52■□□□□ 0.4
UBR5-207ENST00000520539 GOLGA8QA0A0J9YX86 632 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 GOLGA8OA6NCC3 632 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 GOLGA8NF8WBI6 632 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 DNA2P51530 1060 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 LMNB2Q03252 620 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 MTMR3Q13615 1198 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 NOLC1Q14978 699 aaKnown RBP eCLIP17.52■□□□□ 0.43e-7■□□□□ 9.7
UBR5-207ENST00000520539 CCDC89Q8N998 374 aa17.52■□□□□ 0.4
UBR5-207ENST00000520539 ZSCAN16Q9H4T2 348 aaPredicted RBP17.52■□□□□ 0.4
UBR5-207ENST00000520539 ZC3H15Q8WU90 426 aaKnown RBP17.52■□□□□ 0.4
UBR5-207ENST00000520539 HSPA1LP34931 641 aa17.52■□□□□ 0.39
UBR5-207ENST00000520539 ARHGEF2Q92974 986 aaKnown RBP17.52■□□□□ 0.39
UBR5-207ENST00000520539 SMIM24O75264 130 aa17.52■□□□□ 0.39
UBR5-207ENST00000520539 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.39
UBR5-207ENST00000520539 FAM200AQ8TCP9 573 aa17.52■□□□□ 0.39
UBR5-207ENST00000520539 ERMNQ8TAM6 284 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 CUL5Q93034 780 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 STK3Q13188 491 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 PLCD3Q8N3E9 789 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 DACT3Q96B18 629 aaPredicted RBP17.51■□□□□ 0.39
UBR5-207ENST00000520539 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
UBR5-207ENST00000520539 JAKMIP1Q96N16 626 aaKnown RBP17.51■□□□□ 0.39
UBR5-207ENST00000520539 GIPC1O14908 333 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 NACADO15069 1562 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 SCINQ9Y6U3 715 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 KLHDC4Q8TBB5 520 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 LTV1Q96GA3 475 aaPredicted RBP17.51■□□□□ 0.39
UBR5-207ENST00000520539 PCYT1AP49585 367 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 L3MBTL2Q969R5 705 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 TACO1Q9BSH4 297 aaKnown RBP17.51■□□□□ 0.39
UBR5-207ENST00000520539 ELL2O00472 640 aaPredicted RBP17.51■□□□□ 0.39
UBR5-207ENST00000520539 CHD1LQ86WJ1 897 aa17.51■□□□□ 0.39
UBR5-207ENST00000520539 RAD50Q92878 1312 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 EVA1CP58658 441 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 RBM26Q5T8P6 1007 aaKnown RBP17.5■□□□□ 0.39
UBR5-207ENST00000520539 CXorf38Q8TB03 319 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 RAB11FIP3O75154 756 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 EXOC1Q9NV70 894 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 PPP1R9AQ9ULJ8 1098 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 ZFXP17010 805 aaPredicted RBP17.5■□□□□ 0.39
UBR5-207ENST00000520539 PPFIA4O75335 1185 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 COPG1Q9Y678 874 aaKnown RBP17.5■□□□□ 0.39
UBR5-207ENST00000520539 CTTNBP2NLQ9P2B4 639 aa17.5■□□□□ 0.39
UBR5-207ENST00000520539 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms