RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 ST5P78524 1137 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 STYK1Q6J9G0 422 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 FAM117AQ9C073 453 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 PNNQ9H307 717 aaKnown RBP12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 GLTPD2A6NH11 291 aa12.24□□□□□ -0.45
CTNNA1-221ENST00000520339 APLP1P51693 650 aa12.24□□□□□ -0.45
CTNNA1-221ENST00000520339 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
CTNNA1-221ENST00000520339 RALBP1Q15311 655 aa12.24□□□□□ -0.45
CTNNA1-221ENST00000520339 NBPF5PQ86XG9 351 aaPredicted RBP12.24□□□□□ -0.45
CTNNA1-221ENST00000520339 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
CTNNA1-221ENST00000520339 MASTLQ96GX5 879 aa12.24□□□□□ -0.45
CTNNA1-221ENST00000520339 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 KLRG2A4D1S0 409 aaPredicted RBP12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 NPHP1O15259 732 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 FSTL1Q12841 308 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 HLFQ16534 295 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 TPTE2Q6XPS3 522 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 C16orf71Q8IYS4 520 aaPredicted RBP12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 DNAJC5GQ8N7S2 189 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 C7orf43Q8WVR3 580 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 FBXW7Q969H0 707 aa12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTNNA1-221ENST00000520339 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
CTNNA1-221ENST00000520339 PRPF40BQ6NWY9 871 aaKnown RBP12.22□□□□□ -0.45
CTNNA1-221ENST00000520339 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 LTBP3Q9NS15 1303 aa12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 MAPK8IP3Q9UPT6 1336 aa12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 ERVV-1B6SEH8 477 aa12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 NUDT7P0C024 238 aa12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 VEGFAP15692 232 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 ARSIQ5FYB1 569 aa12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 NGEFQ8N5V2 710 aa12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTNNA1-221ENST00000520339 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 POTECB2RU33 542 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 NPR1P16066 1061 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 FOSBP53539 338 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 RIPK4P57078 832 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 SOGA3Q5TF21 947 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 RRP7AQ9Y3A4 280 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-221ENST00000520339 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
CTNNA1-221ENST00000520339 ARFGEF1Q9Y6D6 1849 aa12.19□□□□□ -0.46
CTNNA1-221ENST00000520339 FAM177BA6PVY3 158 aa12.19□□□□□ -0.46
CTNNA1-221ENST00000520339 TMPOP42166 694 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-221ENST00000520339 SMC1BQ8NDV3 1235 aa12.19□□□□□ -0.46
CTNNA1-221ENST00000520339 BABAM1Q9NWV8 329 aa12.19□□□□□ -0.46
CTNNA1-221ENST00000520339 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
CTNNA1-221ENST00000520339 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-221ENST00000520339 LRP10Q7Z4F1 713 aa12.18□□□□□ -0.46
CTNNA1-221ENST00000520339 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
CTNNA1-221ENST00000520339 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
CTNNA1-221ENST00000520339 AFDNP55196 1824 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-221ENST00000520339 ERBB4Q15303 1308 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 MYBBP1AQ9BQG0 1328 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 MYL6BP14649 208 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 HTRA3P83110 453 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 CCDC93Q567U6 631 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 KIF6Q6ZMV9 814 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 ZDHHC16Q969W1 377 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 NYXQ9GZU5 481 aa12.17□□□□□ -0.46
CTNNA1-221ENST00000520339 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 LMOD3Q0VAK6 560 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 SUSD4Q5VX71 490 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 ZNF34Q8IZ26 560 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 ZBTB3Q9H5J0 574 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
CTNNA1-221ENST00000520339 UBN2Q6ZU65 1347 aa12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 GPTP24298 496 aa12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 ALDH1B1P30837 517 aa12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
CTNNA1-221ENST00000520339 CHL1O00533 1208 aa12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 PROSER3Q2NL68 480 aa12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 RTKN2Q8IZC4 609 aa12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 KLRG1Q96E93 195 aa12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
CTNNA1-221ENST00000520339 ZNF277Q9NRM2 450 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms