RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 YY1P25490 414 aa14.65□□□□□ -0.06
SPIDR-212ENST00000519661 ARHGAP27Q6ZUM4 889 aa14.65□□□□□ -0.06
SPIDR-212ENST00000519661 SP8Q8IXZ3 490 aa14.65□□□□□ -0.06
SPIDR-212ENST00000519661 VPS33BQ9H267 617 aa14.65□□□□□ -0.06
SPIDR-212ENST00000519661 SBF1O95248 1867 aa14.65□□□□□ -0.06
SPIDR-212ENST00000519661 LTBP1Q14766 1721 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 GRM8O00222 908 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 CTSWP56202 376 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 CCDC152Q4G0S7 254 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 DDX46Q7L014 1031 aaKnown RBP14.64□□□□□ -0.07
SPIDR-212ENST00000519661 TTLL11Q8NHH1 800 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 SRCIN1Q9C0H9 1055 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 TAOK3Q9H2K8 898 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
SPIDR-212ENST00000519661 PPEF1O14829 653 aaPredicted RBP14.63□□□□□ -0.07
SPIDR-212ENST00000519661 FKBP4Q02790 459 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPIDR-212ENST00000519661 API5Q9BZZ5 524 aaKnown RBP14.63□□□□□ -0.07
SPIDR-212ENST00000519661 WWC3Q9ULE0 1092 aa14.63□□□□□ -0.07
SPIDR-212ENST00000519661 COL4A1P02462 1669 aa14.62□□□□□ -0.07
SPIDR-212ENST00000519661 UBE3BQ7Z3V4 1068 aa14.62□□□□□ -0.07
SPIDR-212ENST00000519661 DUOX1Q9NRD9 1551 aa14.62□□□□□ -0.07
SPIDR-212ENST00000519661 PODXL2Q9NZ53 605 aa14.62□□□□□ -0.07
SPIDR-212ENST00000519661 RPS8P62241 208 aaKnown RBP14.61□□□□□ -0.07
SPIDR-212ENST00000519661 FOXO4P98177 505 aa14.61□□□□□ -0.07
SPIDR-212ENST00000519661 RABL6Q3YEC7 729 aaPredicted RBP14.61□□□□□ -0.07
SPIDR-212ENST00000519661 C9orf131Q5VYM1 1079 aa14.61□□□□□ -0.07
SPIDR-212ENST00000519661 INTS3Q68E01 1043 aaKnown RBP14.61□□□□□ -0.07
SPIDR-212ENST00000519661 ZNF784Q8NCA9 323 aaPredicted RBP14.61□□□□□ -0.07
SPIDR-212ENST00000519661 CCT4P50991 539 aaKnown RBP14.6□□□□□ -0.07
SPIDR-212ENST00000519661 RASSF7Q02833 373 aa14.6□□□□□ -0.07
SPIDR-212ENST00000519661 CELF1Q92879 486 aaKnown RBP14.6□□□□□ -0.07
SPIDR-212ENST00000519661 KAZALD1Q96I82 304 aa14.6□□□□□ -0.07
SPIDR-212ENST00000519661 BCL2L13Q9BXK5 485 aa14.6□□□□□ -0.07
SPIDR-212ENST00000519661 USP44Q9H0E7 712 aa14.6□□□□□ -0.07
SPIDR-212ENST00000519661 NOB1Q9ULX3 412 aaKnown RBP14.6□□□□□ -0.07
SPIDR-212ENST00000519661 MYH3P11055 1940 aa14.6□□□□□ -0.07
SPIDR-212ENST00000519661 DICER1Q9UPY3 1922 aaKnown RBP14.6□□□□□ -0.07
SPIDR-212ENST00000519661 IPO8O15397 1037 aaKnown RBP14.59□□□□□ -0.07
SPIDR-212ENST00000519661 NBPF7P0C2Y1 421 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-212ENST00000519661 TRIM27P14373 513 aa14.58□□□□□ -0.08
SPIDR-212ENST00000519661 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-212ENST00000519661 OLFM4Q6UX06 510 aa14.58□□□□□ -0.08
SPIDR-212ENST00000519661 ATF7IPQ6VMQ6 1270 aa14.58□□□□□ -0.08
SPIDR-212ENST00000519661 CDC5LQ99459 802 aaKnown RBP14.58□□□□□ -0.08
SPIDR-212ENST00000519661 GREM2Q9H772 168 aa14.58□□□□□ -0.08
SPIDR-212ENST00000519661 BSDC1Q9NW68 430 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-212ENST00000519661 RNF181Q9P0P0 153 aa14.58□□□□□ -0.08
SPIDR-212ENST00000519661 CACNA1SQ13698 1873 aa14.57□□□□□ -0.08
SPIDR-212ENST00000519661 FZD9O00144 591 aa14.57□□□□□ -0.08
SPIDR-212ENST00000519661 SUPT20HQ8NEM7 779 aa14.57□□□□□ -0.08
SPIDR-212ENST00000519661 SEC31BQ9NQW1 1179 aa14.57□□□□□ -0.08
SPIDR-212ENST00000519661 COL4A5P29400 1685 aa14.56□□□□□ -0.08
SPIDR-212ENST00000519661 TIAM2Q8IVF5 1701 aa14.56□□□□□ -0.08
SPIDR-212ENST00000519661 BCAR3O75815 825 aa14.56□□□□□ -0.08
SPIDR-212ENST00000519661 IARSP41252 1262 aaKnown RBP14.56□□□□□ -0.08
SPIDR-212ENST00000519661 KIAA2012Q0VF49 1180 aa14.56□□□□□ -0.08
SPIDR-212ENST00000519661 EPHA10Q5JZY3 1008 aa14.56□□□□□ -0.08
SPIDR-212ENST00000519661 SLC4A10Q6U841 1118 aa14.56□□□□□ -0.08
SPIDR-212ENST00000519661 C9orf78Q9NZ63 289 aaPredicted RBP14.56□□□□□ -0.08
SPIDR-212ENST00000519661 GLTPD2A6NH11 291 aa14.55□□□□□ -0.08
SPIDR-212ENST00000519661 SLC51AQ86UW1 340 aa14.55□□□□□ -0.08
SPIDR-212ENST00000519661 MPNDQ8N594 471 aa14.55□□□□□ -0.08
SPIDR-212ENST00000519661 JARID2Q92833 1246 aaPredicted RBP14.55□□□□□ -0.08
SPIDR-212ENST00000519661 L3MBTL3Q96JM7 780 aaPredicted RBP14.55□□□□□ -0.08
SPIDR-212ENST00000519661 ITGA6P23229 1130 aa14.54□□□□□ -0.08
SPIDR-212ENST00000519661 FAM161AQ3B820 660 aa14.54□□□□□ -0.08
SPIDR-212ENST00000519661 ZKSCAN2Q63HK3 967 aa14.54□□□□□ -0.08
SPIDR-212ENST00000519661 ANKRD18AQ8IVF6 992 aa14.54□□□□□ -0.08
SPIDR-212ENST00000519661 ANKRD44Q8N8A2 993 aa14.54□□□□□ -0.08
SPIDR-212ENST00000519661 TMX4Q9H1E5 349 aaPredicted RBP14.54□□□□□ -0.08
SPIDR-212ENST00000519661 ZNF609O15014 1411 aa14.54□□□□□ -0.08
SPIDR-212ENST00000519661 WDR90Q96KV7 1748 aa14.54□□□□□ -0.08
SPIDR-212ENST00000519661 TAF1P21675 1872 aa14.53□□□□□ -0.08
SPIDR-212ENST00000519661 XDHP47989 1333 aa14.53□□□□□ -0.08
SPIDR-212ENST00000519661 MTX1Q13505 466 aa14.53□□□□□ -0.08
SPIDR-212ENST00000519661 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
SPIDR-212ENST00000519661 DPP8Q6V1X1 898 aaPredicted RBP14.53□□□□□ -0.08
SPIDR-212ENST00000519661 SUCLG2Q96I99 432 aa14.53□□□□□ -0.08
SPIDR-212ENST00000519661 ZNF277Q9NRM2 450 aaPredicted RBP14.53□□□□□ -0.08
SPIDR-212ENST00000519661 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
SPIDR-212ENST00000519661 HDAC5Q9UQL6 1122 aa14.53□□□□□ -0.08
SPIDR-212ENST00000519661 KDM2BQ8NHM5 1336 aa14.52□□□□□ -0.08
SPIDR-212ENST00000519661 C15orf52Q6ZUT6 534 aaKnown RBP14.52□□□□□ -0.09
SPIDR-212ENST00000519661 TBC1D16Q8TBP0 767 aa14.52□□□□□ -0.09
SPIDR-212ENST00000519661 POLLQ9UGP5 575 aa14.52□□□□□ -0.09
SPIDR-212ENST00000519661 MINPP1Q9UNW1 487 aa14.52□□□□□ -0.09
SPIDR-212ENST00000519661 IRS2Q9Y4H2 1338 aa14.51□□□□□ -0.09
SPIDR-212ENST00000519661 ANKRD18BA2A2Z9 1011 aa14.51□□□□□ -0.09
SPIDR-212ENST00000519661 GPSM2P81274 684 aa14.51□□□□□ -0.09
SPIDR-212ENST00000519661 IFIT5Q13325 482 aaKnown RBP14.51□□□□□ -0.09
SPIDR-212ENST00000519661 BICC1Q9H694 974 aaKnown RBP14.51□□□□□ -0.09
SPIDR-212ENST00000519661 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
SPIDR-212ENST00000519661 MED23Q9ULK4 1368 aa14.5□□□□□ -0.09
SPIDR-212ENST00000519661 KIF3CO14782 793 aa14.5□□□□□ -0.09
SPIDR-212ENST00000519661 IGHMBP2P38935 993 aaKnown RBP14.5□□□□□ -0.09
SPIDR-212ENST00000519661 GPC2Q8N158 579 aa14.5□□□□□ -0.09
SPIDR-212ENST00000519661 GPBP1L1Q9HC44 474 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-212ENST00000519661 LEMD3Q9Y2U8 911 aa14.5□□□□□ -0.09
SPIDR-212ENST00000519661 CCDC88AQ3V6T2 1871 aa14.49□□□□□ -0.09
SPIDR-212ENST00000519661 POTECB2RU33 542 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms