RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 ARHGAP27Q6ZUM4 889 aa28.51■■■□□ 2.15
SKP1-206ENST00000519321 UTYO14607 1347 aa28.5■■■□□ 2.15
SKP1-206ENST00000519321 GRAPQ13588 217 aa28.5■■■□□ 2.15
SKP1-206ENST00000519321 CC2D2BQ6DHV5 1058 aa28.5■■■□□ 2.15
SKP1-206ENST00000519321 TMC4Q7Z404 712 aa28.5■■■□□ 2.15
SKP1-206ENST00000519321 GRAPLQ8TC17 118 aaPredicted RBP28.5■■■□□ 2.15
SKP1-206ENST00000519321 TMX4Q9H1E5 349 aaPredicted RBP28.5■■■□□ 2.15
SKP1-206ENST00000519321 MYH3P11055 1940 aa28.49■■■□□ 2.15
SKP1-206ENST00000519321 PPEF1O14829 653 aaPredicted RBP28.48■■■□□ 2.15
SKP1-206ENST00000519321 GRIPAP1Q4V328 841 aa28.48■■■□□ 2.15
SKP1-206ENST00000519321 INTS3Q68E01 1043 aaKnown RBP28.48■■■□□ 2.15
SKP1-206ENST00000519321 TTLL11Q8NHH1 800 aa28.48■■■□□ 2.15
SKP1-206ENST00000519321 C7orf43Q8WVR3 580 aa28.48■■■□□ 2.15
SKP1-206ENST00000519321 ZNF219Q9P2Y4 722 aaPredicted RBP28.48■■■□□ 2.15
SKP1-206ENST00000519321 CCDC93Q567U6 631 aa28.47■■■□□ 2.15
SKP1-206ENST00000519321 RTL9Q8NET4 1388 aa28.47■■■□□ 2.15
SKP1-206ENST00000519321 MS4A1P11836 297 aa28.46■■■□□ 2.15
SKP1-206ENST00000519321 USP44Q9H0E7 712 aa28.46■■■□□ 2.15
SKP1-206ENST00000519321 HDAC5Q9UQL6 1122 aa28.46■■■□□ 2.15
SKP1-206ENST00000519321 NBPF7P0C2Y1 421 aaPredicted RBP28.45■■■□□ 2.14
SKP1-206ENST00000519321 FTSJ3Q8IY81 847 aaKnown RBP28.45■■■□□ 2.14
SKP1-206ENST00000519321 RTKN2Q8IZC4 609 aa28.45■■■□□ 2.14
SKP1-206ENST00000519321 CHD4Q14839 1912 aa28.44■■■□□ 2.14
SKP1-206ENST00000519321 CSF1RP07333 972 aa28.44■■■□□ 2.14
SKP1-206ENST00000519321 CLUAP1Q96AJ1 413 aa28.44■■■□□ 2.14
SKP1-206ENST00000519321 CDC5LQ99459 802 aaKnown RBP28.44■■■□□ 2.14
SKP1-206ENST00000519321 ATP6V0A2Q9Y487 856 aa28.44■■■□□ 2.14
SKP1-206ENST00000519321 RPS8P62241 208 aaKnown RBP28.43■■■□□ 2.14
SKP1-206ENST00000519321 SP8Q8IXZ3 490 aa28.43■■■□□ 2.14
SKP1-206ENST00000519321 DZIP1LQ8IYY4 767 aaKnown RBP28.43■■■□□ 2.14
SKP1-206ENST00000519321 FOXO4P98177 505 aa28.42■■■□□ 2.14
SKP1-206ENST00000519321 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.42■■■□□ 2.14
SKP1-206ENST00000519321 CELF1Q92879 486 aaKnown RBP28.42■■■□□ 2.14
SKP1-206ENST00000519321 CCDC85AQ96PX6 553 aaPredicted RBP28.42■■■□□ 2.14
SKP1-206ENST00000519321 GREM2Q9H772 168 aa28.42■■■□□ 2.14
SKP1-206ENST00000519321 SUCLG2Q96I99 432 aa28.41■■■□□ 2.14
SKP1-206ENST00000519321 SEC31BQ9NQW1 1179 aa28.41■■■□□ 2.14
SKP1-206ENST00000519321 LTBP3Q9NS15 1303 aa28.41■■■□□ 2.14
SKP1-206ENST00000519321 GOLGB1Q14789 3259 aaKnown RBP28.4■■■□□ 2.14
SKP1-206ENST00000519321 FER1L6Q2WGJ9 1857 aa28.4■■■□□ 2.14
SKP1-206ENST00000519321 UBTFL1P0CB47 393 aaPredicted RBP28.4■■■□□ 2.14
SKP1-206ENST00000519321 ANKRD18AQ8IVF6 992 aa28.4■■■□□ 2.14
SKP1-206ENST00000519321 TAOK3Q9H2K8 898 aa28.4■■■□□ 2.14
SKP1-206ENST00000519321 NFKBIEO00221 500 aa28.39■■■□□ 2.14
SKP1-206ENST00000519321 GNAI3P08754 354 aa28.39■■■□□ 2.14
SKP1-206ENST00000519321 LMBR1LQ6UX01 489 aa28.39■■■□□ 2.14
SKP1-206ENST00000519321 TNNQ9UQP3 1299 aa28.39■■■□□ 2.14
SKP1-206ENST00000519321 ITGA6P23229 1130 aa28.38■■■□□ 2.13
SKP1-206ENST00000519321 TMEM57Q8N5G2 664 aa28.38■■■□□ 2.13
SKP1-206ENST00000519321 CHMP3Q9Y3E7 222 aa28.38■■■□□ 2.13
SKP1-206ENST00000519321 TAF1P21675 1872 aa28.38■■■□□ 2.13
SKP1-206ENST00000519321 ANKRD18BA2A2Z9 1011 aa28.37■■■□□ 2.13
SKP1-206ENST00000519321 LMNB1P20700 586 aa28.37■■■□□ 2.13
SKP1-206ENST00000519321 FKBP4Q02790 459 aaKnown RBP eCLIP28.37■■■□□ 2.13
SKP1-206ENST00000519321 IFIT5Q13325 482 aaKnown RBP28.37■■■□□ 2.13
SKP1-206ENST00000519321 FAM161AQ3B820 660 aa28.37■■■□□ 2.13
SKP1-206ENST00000519321 EPHA10Q5JZY3 1008 aa28.37■■■□□ 2.13
SKP1-206ENST00000519321 IGHMBP2P38935 993 aaKnown RBP28.36■■■□□ 2.13
SKP1-206ENST00000519321 OLFM4Q6UX06 510 aa28.36■■■□□ 2.13
SKP1-206ENST00000519321 KAZALD1Q96I82 304 aa28.36■■■□□ 2.13
SKP1-206ENST00000519321 PSMD1Q99460 953 aa28.36■■■□□ 2.13
SKP1-206ENST00000519321 RASSF7Q02833 373 aa28.35■■■□□ 2.13
SKP1-206ENST00000519321 CCDC57Q2TAC2 916 aa28.35■■■□□ 2.13
SKP1-206ENST00000519321 RABL6Q3YEC7 729 aaPredicted RBP28.35■■■□□ 2.13
SKP1-206ENST00000519321 BICC1Q9H694 974 aaKnown RBP28.35■■■□□ 2.13
SKP1-206ENST00000519321 SNED1Q8TER0 1413 aa28.35■■■□□ 2.13
SKP1-206ENST00000519321 MPNDQ8N594 471 aa28.34■■■□□ 2.13
SKP1-206ENST00000519321 MEIS3Q99687 375 aa28.34■■■□□ 2.13
SKP1-206ENST00000519321 BSDC1Q9NW68 430 aaPredicted RBP28.34■■■□□ 2.13
SKP1-206ENST00000519321 LRRC37AA6NMS7 1700 aa28.34■■■□□ 2.13
SKP1-206ENST00000519321 C9orf131Q5VYM1 1079 aa28.33■■■□□ 2.13
SKP1-206ENST00000519321 SUPT20HQ8NEM7 779 aa28.33■■■□□ 2.13
SKP1-206ENST00000519321 UTRNP46939 3433 aa28.32■■■□□ 2.12
SKP1-206ENST00000519321 DPP8Q6V1X1 898 aaPredicted RBP28.32■■■□□ 2.12
SKP1-206ENST00000519321 ITPRIPQ8IWB1 547 aa28.32■■■□□ 2.12
SKP1-206ENST00000519321 MPHOSPH8Q99549 860 aa28.32■■■□□ 2.12
SKP1-206ENST00000519321 RNF181Q9P0P0 153 aa28.32■■■□□ 2.12
SKP1-206ENST00000519321 SBF1O95248 1867 aa28.32■■■□□ 2.12
SKP1-206ENST00000519321 RLBP1P12271 317 aa28.31■■■□□ 2.12
SKP1-206ENST00000519321 YY1P25490 414 aa28.31■■■□□ 2.12
SKP1-206ENST00000519321 TAF7LQ5H9L4 462 aa28.31■■■□□ 2.12
SKP1-206ENST00000519321 COL4A1P02462 1669 aa28.31■■■□□ 2.12
SKP1-206ENST00000519321 ANKRD44Q8N8A2 993 aa28.3■■■□□ 2.12
SKP1-206ENST00000519321 RTFDC1Q9BY42 306 aaPredicted RBP28.3■■■□□ 2.12
SKP1-206ENST00000519321 VPS33BQ9H267 617 aa28.3■■■□□ 2.12
SKP1-206ENST00000519321 NSFL1CQ9UNZ2 370 aaKnown RBP28.3■■■□□ 2.12
SKP1-206ENST00000519321 ZC3H4Q9UPT8 1303 aaKnown RBP28.29■■■□□ 2.12
SKP1-206ENST00000519321 PDE3AQ14432 1141 aa28.29■■■□□ 2.12
SKP1-206ENST00000519321 PANK1Q8TE04 598 aa28.29■■■□□ 2.12
SKP1-206ENST00000519321 LRRFIP2Q9Y608 721 aaKnown RBP28.29■■■□□ 2.12
SKP1-206ENST00000519321 PLIN1O60240 522 aa28.28■■■□□ 2.12
SKP1-206ENST00000519321 GNAI2P04899 355 aa28.28■■■□□ 2.12
SKP1-206ENST00000519321 PODXL2Q9NZ53 605 aa28.28■■■□□ 2.12
SKP1-206ENST00000519321 IARSP41252 1262 aaKnown RBP28.27■■■□□ 2.12
SKP1-206ENST00000519321 CHMP4BQ9H444 224 aaKnown RBP28.27■■■□□ 2.12
SKP1-206ENST00000519321 ZNF277Q9NRM2 450 aaPredicted RBP28.27■■■□□ 2.12
SKP1-206ENST00000519321 ANKIB1Q9P2G1 1089 aa28.27■■■□□ 2.12
SKP1-206ENST00000519321 CCDC88AQ3V6T2 1871 aa28.27■■■□□ 2.12
SKP1-206ENST00000519321 XDHP47989 1333 aa28.26■■■□□ 2.11
SKP1-206ENST00000519321 PRELPP51888 382 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms