RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 GIMAP1Q8WWP7 306 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 RASSF7Q02833 373 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 NUP98P52948 1817 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 SSC5DA1L4H1 1573 aa6.54□□□□□ -1.36
AP3B1-204ENST00000519295 CNTNAP4Q9C0A0 1308 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 ESPNB1AK53 854 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 NRDCO43847 1150 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 CHGAP10645 457 aaKnown RBP6.53□□□□□ -1.36
AP3B1-204ENST00000519295 BTF3P20290 206 aaKnown RBP6.53□□□□□ -1.36
AP3B1-204ENST00000519295 CCDC15Q0P6D6 951 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 ZNF512BQ96KM6 892 aaPredicted RBP6.53□□□□□ -1.36
AP3B1-204ENST00000519295 CD2APQ9Y5K6 639 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 ANKRD18BA2A2Z9 1011 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 FAM98CQ17RN3 349 aaKnown RBP6.53□□□□□ -1.36
AP3B1-204ENST00000519295 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 ENOX1Q8TC92 643 aaKnown RBP6.53□□□□□ -1.36
AP3B1-204ENST00000519295 TMC1Q8TDI8 760 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 FAXDC2Q96IV6 333 aa6.53□□□□□ -1.36
AP3B1-204ENST00000519295 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
AP3B1-204ENST00000519295 ROCK2O75116 1388 aaKnown RBP6.53□□□□□ -1.36
AP3B1-204ENST00000519295 DEFB132Q7Z7B7 95 aa6.52□□□□□ -1.37
AP3B1-204ENST00000519295 BOLA2-SMG1P6H3BVE0 249 aa6.52□□□□□ -1.37
AP3B1-204ENST00000519295 SPON1Q9HCB6 807 aa6.52□□□□□ -1.37
AP3B1-204ENST00000519295 IGSF1Q8N6C5 1336 aa6.52□□□□□ -1.37
AP3B1-204ENST00000519295 SF3A1Q15459 793 aaKnown RBP6.52□□□□□ -1.37
AP3B1-204ENST00000519295 MORC1Q86VD1 984 aa6.52□□□□□ -1.37
AP3B1-204ENST00000519295 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.52□□□□□ -1.37
AP3B1-204ENST00000519295 CREB3O43889 395 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 ATP2B3Q16720 1220 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 TTC30AQ86WT1 665 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 KLHL42Q9P2K6 505 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 CEMIPQ8WUJ3 1361 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.51□□□□□ -1.37
AP3B1-204ENST00000519295 RBM47A0AV96 593 aaKnown RBP6.51□□□□□ -1.37
AP3B1-204ENST00000519295 NBPF14Q5TI25 921 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 RETREG2Q8NC44 543 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 MAGEC2Q9UBF1 373 aaPredicted RBP6.51□□□□□ -1.37
AP3B1-204ENST00000519295 PAXBP1Q9Y5B6 917 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 TAF1P21675 1872 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 SMAPO00193 183 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 CTAGE5O15320 804 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 EN1Q05925 392 aaPredicted RBP6.51□□□□□ -1.37
AP3B1-204ENST00000519295 FLAD1Q8NFF5 587 aa6.51□□□□□ -1.37
AP3B1-204ENST00000519295 LARP6Q9BRS8 491 aaKnown RBP6.51□□□□□ -1.37
AP3B1-204ENST00000519295 ABL1P00519 1130 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 HDGFL1Q5TGJ6 251 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 STAG2Q8N3U4 1231 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 IRX2Q9BZI1 471 aaPredicted RBP6.5□□□□□ -1.37
AP3B1-204ENST00000519295 TBC1D2BQ9UPU7 963 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 GOLGA6L3A6NEY3 463 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 LIG1P18858 919 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
AP3B1-204ENST00000519295 LARP1BQ659C4 914 aaKnown RBP6.5□□□□□ -1.37
AP3B1-204ENST00000519295 ANKRD13BQ86YJ7 626 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 TTC30BQ8N4P2 665 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 LZTS2Q9BRK4 669 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 PRDM11Q9NQV5 511 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 ECEL1O95672 775 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 SLFN14P0C7P3 912 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 HOXC9P31274 260 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 NOL8Q76FK4 1167 aaKnown RBP6.5□□□□□ -1.37
AP3B1-204ENST00000519295 PCGF5Q86SE9 256 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 CABLES1Q8TDN4 633 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 L3MBTL2Q969R5 705 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 NBPF3Q9H094 633 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 HEG1Q9ULI3 1381 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 CACNA1FO60840 1977 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 TXNRD1Q16881 649 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 ZFYVE27Q5T4F4 411 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 TRAK1Q9UPV9 953 aa6.5□□□□□ -1.37
AP3B1-204ENST00000519295 MINK1Q8N4C8 1332 aaPredicted RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 PPP1R12AO14974 1030 aaPredicted RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 APPP05067 770 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 IL2RBP14784 551 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 MAGEA8P43361 318 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 LMOD3Q0VAK6 560 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 RBM26Q5T8P6 1007 aaKnown RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 CDC37L1Q7L3B6 337 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 RPUSD2Q8IZ73 545 aaKnown RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 POGKQ9P215 609 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 ZBTB12Q9Y330 459 aaPredicted RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 ZNF827Q17R98 1081 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 CCBE1Q6UXH8 406 aaPredicted RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 ZNF396Q96N95 335 aaPredicted RBP6.49□□□□□ -1.37
AP3B1-204ENST00000519295 LRRC4BQ9NT99 713 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 SLC45A1Q9Y2W3 748 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 LTBP3Q9NS15 1303 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 GUCY2CP25092 1073 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 C22orf23Q9BZE7 217 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 SMC4Q9NTJ3 1288 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 BLOC1S6Q9UL45 172 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 FAN1Q9Y2M0 1017 aa6.49□□□□□ -1.37
AP3B1-204ENST00000519295 PCDH11XQ9BZA7 1347 aa6.48□□□□□ -1.37
AP3B1-204ENST00000519295 PCDH11YQ9BZA8 1340 aa6.48□□□□□ -1.37
AP3B1-204ENST00000519295 CACNA1SQ13698 1873 aa6.48□□□□□ -1.37
AP3B1-204ENST00000519295 FGAP02671 866 aa6.48□□□□□ -1.37
AP3B1-204ENST00000519295 PLBD1Q6P4A8 553 aa6.48□□□□□ -1.37
AP3B1-204ENST00000519295 KRT77Q7Z794 578 aa6.48□□□□□ -1.37
AP3B1-204ENST00000519295 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms