RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GRM5P41594 1212 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 HIF1AQ16665 826 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 TSNAXIP1Q2TAA8 658 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 CAPN12Q6ZSI9 719 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 XAGE2Q96GT9 111 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 PURBQ96QR8 312 aaKnown RBP7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 TIAM1Q13009 1591 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 UTRNP46939 3433 aa7.1□□□□□ -1.27
HMGB1P23-201ENST00000518743 SERTM1A2A2V5 107 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 LDHBP07195 334 aaKnown RBP7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 P4HBP07237 508 aaKnown RBP7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 EHHADHQ08426 723 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 TLR1Q15399 786 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 ALG1LQ6GMV1 187 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 TTC16Q8NEE8 873 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 FRMD6Q96NE9 622 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 ESYT1Q9BSJ8 1104 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 IRX2Q9BZI1 471 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 TMPRSS4Q9NRS4 437 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 NLRP1Q9C000 1473 aa7.09□□□□□ -1.27
HMGB1P23-201ENST00000518743 AHDC1Q5TGY3 1603 aaPredicted RBP7.09□□□□□ -1.28
HMGB1P23-201ENST00000518743 NINLQ9Y2I6 1382 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 A0A1W2PRU2 124 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 LILRA1O75019 489 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 MRPL58Q14197 206 aaKnown RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 TEAD4Q15561 434 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 COX20Q5RI15 118 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 COL13A1Q5TAT6 717 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 FAM129BQ96TA1 746 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 METTL5Q9NRN9 209 aaKnown RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 SCAF11Q99590 1463 aaKnown RBP7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 RTEL1-TNFRSF6BF6WH68 1400 aa7.08□□□□□ -1.28
HMGB1P23-201ENST00000518743 LOC105371045A0A1W2PR82 267 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 WNT7AO00755 349 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 SORBS3O60504 671 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 MZF1P28698 734 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 CLN3Q13286 438 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 DSC3Q14574 896 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 RTN1Q16799 776 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 FBF1Q8TES7 1133 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 CNKSR1Q969H4 720 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
HMGB1P23-201ENST00000518743 SIAH2O43255 324 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 FZD6O60353 706 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 ADH1AP07327 375 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 CANXP27824 592 aaKnown RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 ERCC5P28715 1186 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 MAPK8P45983 427 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 TMC4Q7Z404 712 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 EMID1Q96A84 441 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 NLRP3Q96P20 1036 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 BACH2Q9BYV9 841 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 SAP130Q9H0E3 1048 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 UNC13BO14795 1591 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 DIP2AQ14689 1571 aa7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 KDM5AP29375 1690 aaKnown RBP7.06□□□□□ -1.28
HMGB1P23-201ENST00000518743 TNFRSF10BO14763 440 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 PSMD2Q13200 908 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 UBXN4Q92575 508 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 ZNF232Q9UNY5 417 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 TLL2Q9Y6L7 1015 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 ABCC3O15438 1527 aa7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 PRDM15P57071 1507 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P23-201ENST00000518743 MIA2Q96PC5 1412 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 KCNA6P17658 529 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 NOS2P35228 1153 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 SLC19A1P41440 591 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 DAB2P98082 770 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 PLA2G2CQ5R387 149 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 NIFKQ9BYG3 293 aaKnown RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 CABP1Q9NZU7 370 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 GPC6Q9Y625 555 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 EID1Q9Y6B2 187 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 WASF2Q9Y6W5 498 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 V9GY48 417 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 PZPP20742 1482 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 BRWD3Q6RI45 1802 aa7.04□□□□□ -1.28
HMGB1P23-201ENST00000518743 ATRNO75882 1429 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 EML1O00423 815 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 IL2RAP01589 272 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 HSPA6P17066 643 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 ENOX2Q16206 610 aaKnown RBP7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 NAALADL2Q58DX5 795 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 ALDH16A1Q8IZ83 802 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 GJD3Q8N144 294 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 DNAJC25Q9H1X3 360 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 SPON1Q9HCB6 807 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 RAB6BQ9NRW1 208 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 CCDC87Q9NVE4 849 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 A2MP01023 1474 aa7.03□□□□□ -1.28
HMGB1P23-201ENST00000518743 SPAG9O60271 1321 aaKnown RBP7.02□□□□□ -1.28
HMGB1P23-201ENST00000518743 ATF3P18847 181 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 GPC1P35052 558 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 ADD1P35611 737 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms