RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 ADAMTS19Q8TE59 1207 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 RRP7AQ9Y3A4 280 aaKnown RBP7.55□□□□□ -1.2
CD47-205ENST00000517766 LTN1O94822 1766 aa7.55□□□□□ -1.2
CD47-205ENST00000517766 NCOA3Q9Y6Q9 1424 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 JUNDP17535 347 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 PRKAR2BP31323 418 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 CTHP32929 405 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 NFE2L2Q16236 605 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 FAM160A2Q8N612 972 aaPredicted RBP7.54□□□□□ -1.2
CD47-205ENST00000517766 SPSB2Q99619 263 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 SBNO1A3KN83 1393 aa7.54□□□□□ -1.2
CD47-205ENST00000517766 H3BM21 787 aa7.53□□□□□ -1.2
CD47-205ENST00000517766 PDE3AQ14432 1141 aa7.53□□□□□ -1.2
CD47-205ENST00000517766 RRS1Q15050 365 aaKnown RBP7.53□□□□□ -1.2
CD47-205ENST00000517766 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
CD47-205ENST00000517766 CRBNQ96SW2 442 aa7.53□□□□□ -1.2
CD47-205ENST00000517766 FLT4P35916 1363 aa7.53□□□□□ -1.2
CD47-205ENST00000517766 PHRF1Q9P1Y6 1649 aaKnown RBP7.52□□□□□ -1.2
CD47-205ENST00000517766 PLIN1O60240 522 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 IGHA1P01876 353 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 RFX1P22670 979 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 FBLN1P23142 703 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 AAMPQ13685 434 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 WASHC4Q2M389 1173 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 CYP4X1Q8N118 509 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 KIFC2Q96AC6 838 aa7.52□□□□□ -1.21
CD47-205ENST00000517766 RTL1A6NKG5 1358 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 ARHGEF10O15013 1369 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 ADAM23O75077 832 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 HMOX1P09601 288 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 CANXP27824 592 aaKnown RBP7.51□□□□□ -1.21
CD47-205ENST00000517766 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
CD47-205ENST00000517766 EIF4A2Q14240 407 aaKnown RBP7.51□□□□□ -1.21
CD47-205ENST00000517766 ABTB2Q8N961 1025 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 TRPM3Q9HCF6 1732 aaPredicted RBP7.51□□□□□ -1.21
CD47-205ENST00000517766 STRCP1A6NGW2 1772 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 MAP3K19Q56UN5 1328 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 FANCIQ9NVI1 1328 aa7.51□□□□□ -1.21
CD47-205ENST00000517766 BCAR3O75815 825 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 AMPHP49418 695 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 GNAI1P63096 354 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 PSME1Q06323 249 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 ESCO1Q5FWF5 840 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 CCDC24Q8N4L8 307 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 KCNH5Q8NCM2 988 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 DCCP43146 1447 aa7.5□□□□□ -1.21
CD47-205ENST00000517766 F12P00748 615 aaPredicted RBP7.49□□□□□ -1.21
CD47-205ENST00000517766 EXOSC9Q06265 439 aaKnown RBP7.49□□□□□ -1.21
CD47-205ENST00000517766 ALDH1L2Q3SY69 923 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 HSP90AB2PQ58FF8 381 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 SULT6B1Q6IMI4 303 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 PHACTR3Q96KR7 559 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 NUDT12Q9BQG2 462 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 C19orf44Q9H6X5 657 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 IFT57Q9NWB7 429 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 FKBPLQ9UIM3 349 aa7.49□□□□□ -1.21
CD47-205ENST00000517766 STRCQ7RTU9 1775 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 KDRP35968 1356 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 CACNA1FO60840 1977 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 DXOO77932 396 aaKnown RBP7.48□□□□□ -1.21
CD47-205ENST00000517766 FBXO45P0C2W1 286 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 PTPRNQ16849 979 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 C20orf194Q5TEA3 1177 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 ZKSCAN2Q63HK3 967 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 CENPQQ7L2Z9 268 aaPredicted RBP7.48□□□□□ -1.21
CD47-205ENST00000517766 ALG2Q9H553 416 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 C1orf167Q5SNV9 1468 aa7.48□□□□□ -1.21
CD47-205ENST00000517766 XIRP1Q702N8 1843 aaKnown RBP7.48□□□□□ -1.21
CD47-205ENST00000517766 ALS2Q96Q42 1657 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 SLIT3O75094 1523 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 NFAT5O94916 1531 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 MST1RQ04912 1400 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 TCERG1O14776 1098 aaKnown RBP7.47□□□□□ -1.21
CD47-205ENST00000517766 IPO8O15397 1037 aaKnown RBP7.47□□□□□ -1.21
CD47-205ENST00000517766 CCNYL3P0C7X3 344 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 ZNF853P0CG23 659 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 ATF3P18847 181 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 HOXC9P31274 260 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 SEMA3FQ13275 785 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 MSS51Q4VC12 460 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 GAS2L2Q8NHY3 880 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 FRAT1Q92837 279 aaPredicted RBP7.47□□□□□ -1.21
CD47-205ENST00000517766 TSR2Q969E8 191 aaKnown RBP7.47□□□□□ -1.21
CD47-205ENST00000517766 VIRMAQ69YN4 1812 aaKnown RBP7.47□□□□□ -1.21
CD47-205ENST00000517766 IGSF1Q8N6C5 1336 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 KIF16BQ96L93 1317 aa7.47□□□□□ -1.21
CD47-205ENST00000517766 BTBD11A6QL63 1104 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 HTATSF1O43719 755 aaKnown RBP7.46□□□□□ -1.22
CD47-205ENST00000517766 ADH1BP00325 375 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 KCNH2Q12809 1159 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 PTCRAQ6ISU1 281 aaPredicted RBP7.46□□□□□ -1.22
CD47-205ENST00000517766 PNMA1Q8ND90 353 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 IP6K1Q92551 441 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 SMC4Q9NTJ3 1288 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 EVA1BQ9NVM1 165 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.22
CD47-205ENST00000517766 RGPD2P0DJD1 1756 aa7.46□□□□□ -1.22
CD47-205ENST00000517766 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms