RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 C9orf78Q9NZ63 289 aaPredicted RBP18.46■□□□□ 0.55
SCARNA21-201ENST00000517026 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
SCARNA21-201ENST00000517026 PCNTO95613 3336 aa18.44■□□□□ 0.54
SCARNA21-201ENST00000517026 TRIM27P14373 513 aa18.44■□□□□ 0.54
SCARNA21-201ENST00000517026 CTSWP56202 376 aa18.44■□□□□ 0.54
SCARNA21-201ENST00000517026 GRAPQ13588 217 aa18.44■□□□□ 0.54
SCARNA21-201ENST00000517026 ATF7IPQ6VMQ6 1270 aa18.44■□□□□ 0.54
SCARNA21-201ENST00000517026 GRAPLQ8TC17 118 aaPredicted RBP18.44■□□□□ 0.54
SCARNA21-201ENST00000517026 SEC31BQ9NQW1 1179 aa18.44■□□□□ 0.54
SCARNA21-201ENST00000517026 PPEF1O14829 653 aaPredicted RBP18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 NBPF7P0C2Y1 421 aaPredicted RBP18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 RASSF7Q02833 373 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 CCDC152Q4G0S7 254 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 EPHA10Q5JZY3 1008 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 ZKSCAN2Q63HK3 967 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 DNAJC5GQ8N7S2 189 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 CELF1Q92879 486 aaKnown RBP18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 CLUAP1Q96AJ1 413 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 PLA2G12BQ9BX93 195 aa18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
SCARNA21-201ENST00000517026 NFKBIEO00221 500 aa18.42■□□□□ 0.54
SCARNA21-201ENST00000517026 CCT4P50991 539 aaKnown RBP18.42■□□□□ 0.54
SCARNA21-201ENST00000517026 USP44Q9H0E7 712 aa18.42■□□□□ 0.54
SCARNA21-201ENST00000517026 GREM2Q9H772 168 aa18.42■□□□□ 0.54
SCARNA21-201ENST00000517026 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
SCARNA21-201ENST00000517026 DLEC1Q9Y238 1755 aa18.42■□□□□ 0.54
SCARNA21-201ENST00000517026 SLX4Q8IY92 1834 aa18.42■□□□□ 0.54
SCARNA21-201ENST00000517026 BBOX1O75936 387 aa18.41■□□□□ 0.54
SCARNA21-201ENST00000517026 PRELPP51888 382 aa18.41■□□□□ 0.54
SCARNA21-201ENST00000517026 FOXO4P98177 505 aa18.41■□□□□ 0.54
SCARNA21-201ENST00000517026 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
SCARNA21-201ENST00000517026 SUCLG2Q96I99 432 aa18.41■□□□□ 0.54
SCARNA21-201ENST00000517026 DDX60Q8IY21 1712 aaKnown RBP18.4■□□□□ 0.54
SCARNA21-201ENST00000517026 CSF1RP07333 972 aa18.4■□□□□ 0.54
SCARNA21-201ENST00000517026 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
SCARNA21-201ENST00000517026 KAZALD1Q96I82 304 aa18.4■□□□□ 0.54
SCARNA21-201ENST00000517026 ATP6V0A2Q9Y487 856 aa18.4■□□□□ 0.54
SCARNA21-201ENST00000517026 UTYO14607 1347 aa18.4■□□□□ 0.54
SCARNA21-201ENST00000517026 FAM161AQ3B820 660 aa18.39■□□□□ 0.53
SCARNA21-201ENST00000517026 SOGA3Q5TF21 947 aa18.39■□□□□ 0.53
SCARNA21-201ENST00000517026 INTS3Q68E01 1043 aaKnown RBP18.39■□□□□ 0.53
SCARNA21-201ENST00000517026 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
SCARNA21-201ENST00000517026 LMBR1LQ6UX01 489 aa18.38■□□□□ 0.53
SCARNA21-201ENST00000517026 SP8Q8IXZ3 490 aa18.38■□□□□ 0.53
SCARNA21-201ENST00000517026 COL4A1P02462 1669 aa18.38■□□□□ 0.53
SCARNA21-201ENST00000517026 RLBP1P12271 317 aa18.37■□□□□ 0.53
SCARNA21-201ENST00000517026 RTKN2Q8IZC4 609 aa18.37■□□□□ 0.53
SCARNA21-201ENST00000517026 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
SCARNA21-201ENST00000517026 TAOK3Q9H2K8 898 aa18.37■□□□□ 0.53
SCARNA21-201ENST00000517026 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
SCARNA21-201ENST00000517026 PLIN1O60240 522 aa18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 ITGA6P23229 1130 aa18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 LAMB2P55268 1798 aa18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 CC2D2BQ6DHV5 1058 aa18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 ANKRD18AQ8IVF6 992 aa18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 MEIS3Q99687 375 aa18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 ZNF277Q9NRM2 450 aaPredicted RBP18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 RNF181Q9P0P0 153 aa18.36■□□□□ 0.53
SCARNA21-201ENST00000517026 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 RTL9Q8NET4 1388 aa18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 LMNB1P20700 586 aa18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 APLP1P51693 650 aa18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 ANKRD44Q8N8A2 993 aa18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 PANK1Q8TE04 598 aa18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
SCARNA21-201ENST00000517026 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
SCARNA21-201ENST00000517026 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
SCARNA21-201ENST00000517026 TOMM70O94826 608 aa18.34■□□□□ 0.53
SCARNA21-201ENST00000517026 UBTFL1P0CB47 393 aaPredicted RBP18.34■□□□□ 0.53
SCARNA21-201ENST00000517026 TMC4Q7Z404 712 aa18.34■□□□□ 0.53
SCARNA21-201ENST00000517026 FTSJ3Q8IY81 847 aaKnown RBP18.34■□□□□ 0.53
SCARNA21-201ENST00000517026 ANKRD18BA2A2Z9 1011 aa18.33■□□□□ 0.52
SCARNA21-201ENST00000517026 GPSM2P81274 684 aa18.33■□□□□ 0.52
SCARNA21-201ENST00000517026 IFIT5Q13325 482 aaKnown RBP18.33■□□□□ 0.52
SCARNA21-201ENST00000517026 MPNDQ8N594 471 aa18.33■□□□□ 0.52
SCARNA21-201ENST00000517026 RABL6Q3YEC7 729 aaPredicted RBP18.32■□□□□ 0.52
SCARNA21-201ENST00000517026 DPP8Q6V1X1 898 aaPredicted RBP18.32■□□□□ 0.52
SCARNA21-201ENST00000517026 ZNF594Q96JF6 807 aaPredicted RBP18.32■□□□□ 0.52
SCARNA21-201ENST00000517026 PSMD1Q99460 953 aa18.32■□□□□ 0.52
SCARNA21-201ENST00000517026 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
SCARNA21-201ENST00000517026 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
SCARNA21-201ENST00000517026 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
SCARNA21-201ENST00000517026 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
SCARNA21-201ENST00000517026 GRIPAP1Q4V328 841 aa18.31■□□□□ 0.52
SCARNA21-201ENST00000517026 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
SCARNA21-201ENST00000517026 BSDC1Q9NW68 430 aaPredicted RBP18.31■□□□□ 0.52
SCARNA21-201ENST00000517026 TAF1P21675 1872 aa18.31■□□□□ 0.52
SCARNA21-201ENST00000517026 CACNA1SQ13698 1873 aa18.31■□□□□ 0.52
SCARNA21-201ENST00000517026 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
SCARNA21-201ENST00000517026 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
SCARNA21-201ENST00000517026 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
SCARNA21-201ENST00000517026 GNAI3P08754 354 aa18.29■□□□□ 0.52
SCARNA21-201ENST00000517026 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
SCARNA21-201ENST00000517026 TAF7LQ5H9L4 462 aa18.29■□□□□ 0.52
SCARNA21-201ENST00000517026 C20orf194Q5TEA3 1177 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms