RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 IL16Q14005 1332 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 GRIN3BO60391 1043 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 NBR1Q14596 966 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 LHX8Q68G74 356 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 C2CD5Q86YS7 1000 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 WDR63Q8IWG1 891 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 ZNF34Q8IZ26 560 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 PHAXQ9H814 394 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 PIM2Q9P1W9 311 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 DLEC1Q9Y238 1755 aa14.26□□□□□ -0.13
UBE2D3-232ENST00000514755 ZNF521Q96K83 1311 aa14.25□□□□□ -0.13
UBE2D3-232ENST00000514755 TCERG1O14776 1098 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-232ENST00000514755 SUSD4Q5VX71 490 aa14.25□□□□□ -0.13
UBE2D3-232ENST00000514755 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
UBE2D3-232ENST00000514755 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
UBE2D3-232ENST00000514755 ABCC12Q96J65 1359 aa14.24□□□□□ -0.13
UBE2D3-232ENST00000514755 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
UBE2D3-232ENST00000514755 NPHP1O15259 732 aa14.24□□□□□ -0.13
UBE2D3-232ENST00000514755 ST5P78524 1137 aa14.24□□□□□ -0.13
UBE2D3-232ENST00000514755 ZNF428Q96B54 188 aa14.24□□□□□ -0.13
UBE2D3-232ENST00000514755 ARFGEF1Q9Y6D6 1849 aa14.23□□□□□ -0.13
UBE2D3-232ENST00000514755 SLC34A2O95436 690 aa14.23□□□□□ -0.13
UBE2D3-232ENST00000514755 TWISTNBQ3B726 338 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-232ENST00000514755 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
UBE2D3-232ENST00000514755 DALRD3Q5D0E6 543 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-232ENST00000514755 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
UBE2D3-232ENST00000514755 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
UBE2D3-232ENST00000514755 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 H0YIN7 160 aa14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 NTSR2O95665 410 aa14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 PDE6BP35913 854 aa14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 OXER1Q8TDS5 423 aa14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 ZNF622Q969S3 477 aaKnown RBP eCLIP14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 HYPKQ9NX55 129 aa14.22□□□□□ -0.13
UBE2D3-232ENST00000514755 SRGNP10124 158 aa14.21□□□□□ -0.13
UBE2D3-232ENST00000514755 TCIRG1Q13488 830 aa14.21□□□□□ -0.13
UBE2D3-232ENST00000514755 ANKRD13DQ6ZTN6 518 aa14.21□□□□□ -0.13
UBE2D3-232ENST00000514755 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
UBE2D3-232ENST00000514755 CACNA1SQ13698 1873 aa14.21□□□□□ -0.14
UBE2D3-232ENST00000514755 ARFGEF2Q9Y6D5 1785 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 KLRG2A4D1S0 409 aaPredicted RBP14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 VAMP4O75379 141 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 GTF2E1P29083 439 aaPredicted RBP14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 CCDC30Q5VVM6 783 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 ARHGAP27Q6ZUM4 889 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 G2E3Q7L622 706 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 NLRP10Q86W26 655 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 TTLL6Q8N841 843 aa14.2□□□□□ -0.14
UBE2D3-232ENST00000514755 ATP5J2-PTCD1G3V325 749 aa14.19□□□□□ -0.14
UBE2D3-232ENST00000514755 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
UBE2D3-232ENST00000514755 NYXQ9GZU5 481 aa14.19□□□□□ -0.14
UBE2D3-232ENST00000514755 SLX4Q8IY92 1834 aa14.19□□□□□ -0.14
UBE2D3-232ENST00000514755 IBTKQ9P2D0 1353 aaPredicted RBP14.19□□□□□ -0.14
UBE2D3-232ENST00000514755 DPYSL4O14531 572 aa14.18□□□□□ -0.14
UBE2D3-232ENST00000514755 PARP10Q53GL7 1025 aa14.18□□□□□ -0.14
UBE2D3-232ENST00000514755 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
UBE2D3-232ENST00000514755 ZNF784Q8NCA9 323 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-232ENST00000514755 MASTLQ96GX5 879 aa14.18□□□□□ -0.14
UBE2D3-232ENST00000514755 ISCA1Q9BUE6 129 aa14.18□□□□□ -0.14
UBE2D3-232ENST00000514755 UTP14AQ9BVJ6 771 aaKnown RBP14.18□□□□□ -0.14
UBE2D3-232ENST00000514755 C21orf2O43822 256 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 PRELPP51888 382 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 RASSF7Q02833 373 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 STYK1Q6J9G0 422 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 PPP1R42Q7Z4L9 355 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 RIC3Q7Z5B4 369 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 CDCA7LQ96GN5 454 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 MYH16Q9H6N6 1097 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 PDZRN3Q9UPQ7 1066 aa14.17□□□□□ -0.14
UBE2D3-232ENST00000514755 CRY2Q49AN0 593 aa14.16□□□□□ -0.14
UBE2D3-232ENST00000514755 PRPF40BQ6NWY9 871 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-232ENST00000514755 SLC51AQ86UW1 340 aa14.16□□□□□ -0.14
UBE2D3-232ENST00000514755 MYD88Q99836 296 aa14.16□□□□□ -0.14
UBE2D3-232ENST00000514755 ADCY9O60503 1353 aa14.16□□□□□ -0.14
UBE2D3-232ENST00000514755 NFKBIEO00221 500 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 HCLS1P14317 486 aaPredicted RBP14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 NPR1P16066 1061 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 SLFN5Q08AF3 891 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 OLFM4Q6UX06 510 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 CNKSR1Q969H4 720 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 STK31Q9BXU1 1019 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 MAP3K2Q9Y2U5 619 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 RIC1Q4ADV7 1423 aa14.15□□□□□ -0.14
UBE2D3-232ENST00000514755 SBF1O95248 1867 aa14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 LAMB2P55268 1798 aa14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 PI4KAP2A4QPH2 592 aa14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 RTL5Q5HYW3 569 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 PI4KAP1Q8N8J0 262 aa14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 C7orf43Q8WVR3 580 aa14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 FAM89AQ96GI7 184 aa14.14□□□□□ -0.15
UBE2D3-232ENST00000514755 METTL22Q9BUU2 404 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms