RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 CNTN3Q9P232 1028 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 LCE2BO14633 110 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 POLR3DP05423 398 aaPredicted RBP7.17□□□□□ -1.26
NIPBL-207ENST00000513819 ITGA6P23229 1130 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 VAMP1P23763 118 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 IRS1P35568 1242 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 DAB2P98082 770 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 PSMD2Q13200 908 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 MRPL58Q14197 206 aaKnown RBP7.17□□□□□ -1.26
NIPBL-207ENST00000513819 C1orf127Q8N9H9 656 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 GTPBP3Q969Y2 492 aaKnown RBP7.17□□□□□ -1.26
NIPBL-207ENST00000513819 ABHD17AQ96GS6 310 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 BCL11AQ9H165 835 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 CHRDQ9H2X0 955 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 MRS2Q9HD23 443 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 IGSF5Q9NSI5 407 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 NDFIP2Q9NV92 336 aa7.17□□□□□ -1.26
NIPBL-207ENST00000513819 EREGO14944 169 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 TARSP26639 723 aaKnown RBP7.16□□□□□ -1.26
NIPBL-207ENST00000513819 CCINQ13939 588 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 PI16Q6UXB8 463 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 TMC4Q7Z404 712 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 FBF1Q8TES7 1133 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 CCDC74AQ96AQ1 378 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 GSX2Q9BZM3 304 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 ABI2Q9NYB9 513 aaPredicted RBP7.16□□□□□ -1.26
NIPBL-207ENST00000513819 MARK1Q9P0L2 795 aa7.16□□□□□ -1.26
NIPBL-207ENST00000513819 C11orf95C9JLR9 678 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-207ENST00000513819 SORBS3O60504 671 aa7.15□□□□□ -1.26
NIPBL-207ENST00000513819 CYP2E1P05181 493 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-207ENST00000513819 CD33P20138 364 aa7.15□□□□□ -1.26
NIPBL-207ENST00000513819 GNA15P30679 374 aa7.15□□□□□ -1.26
NIPBL-207ENST00000513819 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
NIPBL-207ENST00000513819 TTC39BQ5VTQ0 682 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-207ENST00000513819 RAB44Q7Z6P3 723 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-207ENST00000513819 EPS8L3Q8TE67 593 aaKnown RBP7.15□□□□□ -1.26
NIPBL-207ENST00000513819 SLC30A3Q99726 388 aa7.15□□□□□ -1.26
NIPBL-207ENST00000513819 BACH2Q9BYV9 841 aa7.15□□□□□ -1.26
NIPBL-207ENST00000513819 C11orf16Q9NQ32 467 aa7.15□□□□□ -1.26
NIPBL-207ENST00000513819 VTI1BQ9UEU0 232 aa7.15□□□□□ -1.26
NIPBL-207ENST00000513819 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-207ENST00000513819 CDC14CA4D256 554 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 GPR25O00155 361 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 RARAP10276 462 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 TCF3P15923 654 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 LAMC2Q13753 1193 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 NPHS2Q9NP85 383 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 ZFATQ9P243 1243 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 KANSL3Q9P2N6 904 aa7.14□□□□□ -1.27
NIPBL-207ENST00000513819 POTECB2RU33 542 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 MMP20O60882 483 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 PPFIA3O75145 1194 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 NFKB1P19838 968 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 CES1P23141 567 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 SPEM2Q0P670 501 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 BHMTQ93088 406 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 GMCL1Q96IK5 515 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 PNMA5Q96PV4 448 aa7.13□□□□□ -1.27
NIPBL-207ENST00000513819 LDLRAD1Q5T700 205 aa7.12□□□□□ -1.27
NIPBL-207ENST00000513819 GALNT12Q8IXK2 581 aa7.12□□□□□ -1.27
NIPBL-207ENST00000513819 VWA5B2Q8N398 1253 aa7.12□□□□□ -1.27
NIPBL-207ENST00000513819 NLRP2Q9NX02 1062 aa7.12□□□□□ -1.27
NIPBL-207ENST00000513819 ATXN7L1Q9ULK2 861 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-207ENST00000513819 SPG7Q9UQ90 795 aa7.12□□□□□ -1.27
NIPBL-207ENST00000513819 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-207ENST00000513819 FGFR3P22607 806 aa7.11□□□□□ -1.27
NIPBL-207ENST00000513819 CTBSQ01459 385 aa7.11□□□□□ -1.27
NIPBL-207ENST00000513819 TMEM87AQ8NBN3 555 aa7.11□□□□□ -1.27
NIPBL-207ENST00000513819 OR13H1Q8NG92 308 aa7.11□□□□□ -1.27
NIPBL-207ENST00000513819 OSBPL7Q9BZF2 842 aa7.11□□□□□ -1.27
NIPBL-207ENST00000513819 AK5Q9Y6K8 562 aa7.11□□□□□ -1.27
NIPBL-207ENST00000513819 PHF20L1A8MW92 1017 aa7.1□□□□□ -1.27
NIPBL-207ENST00000513819 GADD45BO75293 160 aaPredicted RBP7.1□□□□□ -1.27
NIPBL-207ENST00000513819 EIF4BP23588 611 aaKnown RBP7.1□□□□□ -1.27
NIPBL-207ENST00000513819 PMEPA1Q969W9 287 aa7.1□□□□□ -1.27
NIPBL-207ENST00000513819 FRMD6Q96NE9 622 aa7.1□□□□□ -1.27
NIPBL-207ENST00000513819 TRERF1Q96PN7 1200 aa7.1□□□□□ -1.27
NIPBL-207ENST00000513819 LATS2Q9NRM7 1088 aa7.1□□□□□ -1.27
NIPBL-207ENST00000513819 PHF24Q9UPV7 400 aa7.1□□□□□ -1.27
NIPBL-207ENST00000513819 PSAPP07602 524 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 CTSHP09668 335 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 ITGAEP38570 1179 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 VEGFBP49765 207 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 COL13A1Q5TAT6 717 aaPredicted RBP7.09□□□□□ -1.27
NIPBL-207ENST00000513819 C9orf131Q5VYM1 1079 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 NXPE4Q6UWF7 544 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 SV2AQ7L0J3 742 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 BCO2Q9BYV7 579 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 C12orf49Q9H741 205 aa7.09□□□□□ -1.27
NIPBL-207ENST00000513819 TLR7Q9NYK1 1049 aaKnown RBP7.09□□□□□ -1.27
NIPBL-207ENST00000513819 SCAMP3O14828 347 aaKnown RBP7.08□□□□□ -1.28
NIPBL-207ENST00000513819 ACPPP15309 386 aa7.08□□□□□ -1.28
NIPBL-207ENST00000513819 FAM182BQ5T319 152 aa7.08□□□□□ -1.28
NIPBL-207ENST00000513819 PEAR1Q5VY43 1037 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-207ENST00000513819 NSUN5Q96P11 429 aaKnown RBP7.08□□□□□ -1.28
NIPBL-207ENST00000513819 SALL4Q9UJQ4 1053 aa7.08□□□□□ -1.28
NIPBL-207ENST00000513819 A0A1W2PP55 124 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 C2CD2LO14523 706 aa7.07□□□□□ -1.28
NIPBL-207ENST00000513819 MAP3K6O95382 1288 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms