RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 HNRNPUQ00839 825 aaKnown RBP eCLIP17.87■□□□□ 0.45
ABCC3-212ENST00000513511 GRIPAP1Q4V328 841 aa17.87■□□□□ 0.45
ABCC3-212ENST00000513511 IFFO2Q5TF58 517 aa17.87■□□□□ 0.45
ABCC3-212ENST00000513511 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
ABCC3-212ENST00000513511 NIM1KQ8IY84 436 aa17.87■□□□□ 0.45
ABCC3-212ENST00000513511 GPC2Q8N158 579 aa17.87■□□□□ 0.45
ABCC3-212ENST00000513511 ATP6V0A2Q9Y487 856 aa17.87■□□□□ 0.45
ABCC3-212ENST00000513511 SLFN5Q08AF3 891 aa17.86■□□□□ 0.45
ABCC3-212ENST00000513511 AOC3Q16853 763 aa17.86■□□□□ 0.45
ABCC3-212ENST00000513511 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
ABCC3-212ENST00000513511 PHAXQ9H814 394 aaKnown RBP17.86■□□□□ 0.45
ABCC3-212ENST00000513511 VAMP4O75379 141 aa17.85■□□□□ 0.45
ABCC3-212ENST00000513511 LMOD1P29536 600 aaPredicted RBP17.85■□□□□ 0.45
ABCC3-212ENST00000513511 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
ABCC3-212ENST00000513511 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
ABCC3-212ENST00000513511 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
ABCC3-212ENST00000513511 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
ABCC3-212ENST00000513511 MKRN1Q9UHC7 482 aaKnown RBP17.85■□□□□ 0.45
ABCC3-212ENST00000513511 TAF1P21675 1872 aa17.84■□□□□ 0.45
ABCC3-212ENST00000513511 DDX60Q8IY21 1712 aaKnown RBP17.84■□□□□ 0.45
ABCC3-212ENST00000513511 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
ABCC3-212ENST00000513511 BBOX1O75936 387 aa17.83■□□□□ 0.44
ABCC3-212ENST00000513511 GRAPQ13588 217 aa17.83■□□□□ 0.44
ABCC3-212ENST00000513511 MAP1SQ66K74 1059 aaPredicted RBP17.83■□□□□ 0.44
ABCC3-212ENST00000513511 PNMA8AQ86V59 439 aaPredicted RBP17.83■□□□□ 0.44
ABCC3-212ENST00000513511 GRAPLQ8TC17 118 aaPredicted RBP17.83■□□□□ 0.44
ABCC3-212ENST00000513511 ISCA1Q9BUE6 129 aa17.83■□□□□ 0.44
ABCC3-212ENST00000513511 CREBZFQ9NS37 354 aa17.83■□□□□ 0.44
ABCC3-212ENST00000513511 SP8Q8IXZ3 490 aa17.82■□□□□ 0.44
ABCC3-212ENST00000513511 MPNDQ8N594 471 aa17.82■□□□□ 0.44
ABCC3-212ENST00000513511 SUPT20HQ8NEM7 779 aa17.82■□□□□ 0.44
ABCC3-212ENST00000513511 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
ABCC3-212ENST00000513511 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
ABCC3-212ENST00000513511 G2E3Q7L622 706 aa17.81■□□□□ 0.44
ABCC3-212ENST00000513511 TRMT2AQ8IZ69 625 aaKnown RBP17.81■□□□□ 0.44
ABCC3-212ENST00000513511 MYD88Q99836 296 aa17.81■□□□□ 0.44
ABCC3-212ENST00000513511 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
ABCC3-212ENST00000513511 PASKQ96RG2 1323 aa17.8■□□□□ 0.44
ABCC3-212ENST00000513511 EPS15P42566 896 aa17.8■□□□□ 0.44
ABCC3-212ENST00000513511 SCNN1DP51172 638 aa17.8■□□□□ 0.44
ABCC3-212ENST00000513511 IRS4O14654 1257 aaPredicted RBP17.79■□□□□ 0.44
ABCC3-212ENST00000513511 HSPA1AP0DMV8 641 aaKnown RBP17.79■□□□□ 0.44
ABCC3-212ENST00000513511 HSPA1BP0DMV9 641 aaKnown RBP17.79■□□□□ 0.44
ABCC3-212ENST00000513511 CNTROBQ8N137 903 aa17.79■□□□□ 0.44
ABCC3-212ENST00000513511 CELF1Q92879 486 aaKnown RBP17.79■□□□□ 0.44
ABCC3-212ENST00000513511 TMEM88BA6NKF7 163 aa17.78■□□□□ 0.44
ABCC3-212ENST00000513511 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
ABCC3-212ENST00000513511 ITGBL1O95965 494 aaPredicted RBP17.78■□□□□ 0.44
ABCC3-212ENST00000513511 FLIIQ13045 1269 aa17.78■□□□□ 0.44
ABCC3-212ENST00000513511 RTFDC1Q9BY42 306 aaPredicted RBP17.78■□□□□ 0.44
ABCC3-212ENST00000513511 ZNRF3Q9ULT6 936 aa17.78■□□□□ 0.44
ABCC3-212ENST00000513511 ZBED9Q6R2W3 1325 aa17.77■□□□□ 0.44
ABCC3-212ENST00000513511 RAD17O75943 681 aa17.77■□□□□ 0.44
ABCC3-212ENST00000513511 CXCL9Q07325 125 aa17.77■□□□□ 0.44
ABCC3-212ENST00000513511 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.44
ABCC3-212ENST00000513511 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
ABCC3-212ENST00000513511 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
ABCC3-212ENST00000513511 NSFL1CQ9UNZ2 370 aaKnown RBP17.77■□□□□ 0.44
ABCC3-212ENST00000513511 MAP3K2Q9Y2U5 619 aa17.77■□□□□ 0.44
ABCC3-212ENST00000513511 COL4A1P02462 1669 aa17.77■□□□□ 0.43
ABCC3-212ENST00000513511 LRRC37AA6NMS7 1700 aa17.76■□□□□ 0.43
ABCC3-212ENST00000513511 DUOX1Q9NRD9 1551 aa17.76■□□□□ 0.43
ABCC3-212ENST00000513511 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
ABCC3-212ENST00000513511 TMC4Q7Z404 712 aa17.76■□□□□ 0.43
ABCC3-212ENST00000513511 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
ABCC3-212ENST00000513511 BCL2L13Q9BXK5 485 aa17.76■□□□□ 0.43
ABCC3-212ENST00000513511 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
ABCC3-212ENST00000513511 CACNA1FO60840 1977 aa17.76■□□□□ 0.43
ABCC3-212ENST00000513511 PI4KAP2A4QPH2 592 aa17.75■□□□□ 0.43
ABCC3-212ENST00000513511 C6orf229H3BNL8 230 aa17.75■□□□□ 0.43
ABCC3-212ENST00000513511 RIMBP2O15034 1052 aa17.75■□□□□ 0.43
ABCC3-212ENST00000513511 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
ABCC3-212ENST00000513511 FKBP5Q13451 457 aaPredicted RBP17.75■□□□□ 0.43
ABCC3-212ENST00000513511 CIAPIN1Q6FI81 312 aa17.75■□□□□ 0.43
ABCC3-212ENST00000513511 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
ABCC3-212ENST00000513511 PI4KAP1Q8N8J0 262 aa17.75■□□□□ 0.43
ABCC3-212ENST00000513511 ZBTB38Q8NAP3 1195 aaPredicted RBP17.75■□□□□ 0.43
ABCC3-212ENST00000513511 CNTNAP1P78357 1384 aa17.75■□□□□ 0.43
ABCC3-212ENST00000513511 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
ABCC3-212ENST00000513511 USP50Q70EL3 339 aaPredicted RBP17.74■□□□□ 0.43
ABCC3-212ENST00000513511 METTL22Q9BUU2 404 aaPredicted RBP17.74■□□□□ 0.43
ABCC3-212ENST00000513511 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
ABCC3-212ENST00000513511 GPRC5DQ9NZD1 345 aa17.74■□□□□ 0.43
ABCC3-212ENST00000513511 ABT1Q9ULW3 272 aaKnown RBP17.74■□□□□ 0.43
ABCC3-212ENST00000513511 GPSM2P81274 684 aa17.73■□□□□ 0.43
ABCC3-212ENST00000513511 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
ABCC3-212ENST00000513511 WASHC4Q2M389 1173 aa17.73■□□□□ 0.43
ABCC3-212ENST00000513511 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
ABCC3-212ENST00000513511 SSH1Q8WYL5 1049 aa17.73■□□□□ 0.43
ABCC3-212ENST00000513511 GPR101Q96P66 508 aaPredicted RBP17.73■□□□□ 0.43
ABCC3-212ENST00000513511 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
ABCC3-212ENST00000513511 SEC31BQ9NQW1 1179 aa17.73■□□□□ 0.43
ABCC3-212ENST00000513511 ADARB2Q9NS39 739 aaKnown RBP17.73■□□□□ 0.43
ABCC3-212ENST00000513511 YDJCA8MPS7 323 aa17.72■□□□□ 0.43
ABCC3-212ENST00000513511 VEGFBP49765 207 aa17.72■□□□□ 0.43
ABCC3-212ENST00000513511 RPS8P62241 208 aaKnown RBP17.72■□□□□ 0.43
ABCC3-212ENST00000513511 TNIP1Q15025 636 aa17.72■□□□□ 0.43
ABCC3-212ENST00000513511 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
ABCC3-212ENST00000513511 TRAF5O00463 557 aa17.71■□□□□ 0.43
ABCC3-212ENST00000513511 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms