RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 MMP10P09238 476 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 CCDC57Q2TAC2 916 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 RABL6Q3YEC7 729 aaPredicted RBP13.49□□□□□ -0.25
PFDN1-204ENST00000512707 ERFEQ4G0M1 354 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 HSP90AB4PQ58FF6 505 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 GCC1Q96CN9 775 aa13.49□□□□□ -0.25
PFDN1-204ENST00000512707 POLRMTO00411 1230 aaKnown RBP13.48□□□□□ -0.25
PFDN1-204ENST00000512707 HCLS1P14317 486 aaPredicted RBP13.48□□□□□ -0.25
PFDN1-204ENST00000512707 FOXO4P98177 505 aa13.48□□□□□ -0.25
PFDN1-204ENST00000512707 IFIT5Q13325 482 aaKnown RBP13.48□□□□□ -0.25
PFDN1-204ENST00000512707 TAF7LQ5H9L4 462 aa13.48□□□□□ -0.25
PFDN1-204ENST00000512707 SSH3Q8TE77 659 aa13.48□□□□□ -0.25
PFDN1-204ENST00000512707 NLRP3Q96P20 1036 aa13.48□□□□□ -0.25
PFDN1-204ENST00000512707 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
PFDN1-204ENST00000512707 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
PFDN1-204ENST00000512707 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
PFDN1-204ENST00000512707 POLD1P28340 1107 aa13.47□□□□□ -0.25
PFDN1-204ENST00000512707 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-204ENST00000512707 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
PFDN1-204ENST00000512707 PRR5LQ6MZQ0 368 aa13.47□□□□□ -0.25
PFDN1-204ENST00000512707 ZNF784Q8NCA9 323 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-204ENST00000512707 KAZALD1Q96I82 304 aa13.47□□□□□ -0.25
PFDN1-204ENST00000512707 MTFR1LQ9H019 292 aa13.47□□□□□ -0.25
PFDN1-204ENST00000512707 LAMB2P55268 1798 aa13.47□□□□□ -0.25
PFDN1-204ENST00000512707 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 ANKRD18BA2A2Z9 1011 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 CSF1RP07333 972 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 DDR1Q08345 913 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 POLA2Q14181 598 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 EPHA10Q5JZY3 1008 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 SIRT2Q8IXJ6 389 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 SYNE4Q8N205 404 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
PFDN1-204ENST00000512707 FHDC1Q9C0D6 1143 aaPredicted RBP13.46□□□□□ -0.25
PFDN1-204ENST00000512707 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
PFDN1-204ENST00000512707 IGHDP01880 384 aa13.45□□□□□ -0.26
PFDN1-204ENST00000512707 CDC5LQ99459 802 aaKnown RBP13.45□□□□□ -0.26
PFDN1-204ENST00000512707 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
PFDN1-204ENST00000512707 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
PFDN1-204ENST00000512707 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
PFDN1-204ENST00000512707 KDM2BQ8NHM5 1336 aa13.44□□□□□ -0.26
PFDN1-204ENST00000512707 RAB11FIP3O75154 756 aa13.44□□□□□ -0.26
PFDN1-204ENST00000512707 ITGA6P23229 1130 aa13.44□□□□□ -0.26
PFDN1-204ENST00000512707 PDE6BP35913 854 aa13.44□□□□□ -0.26
PFDN1-204ENST00000512707 G3BP1Q13283 466 aaKnown RBP eCLIP13.44□□□□□ -0.26
PFDN1-204ENST00000512707 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
PFDN1-204ENST00000512707 FAM161AQ3B820 660 aa13.44□□□□□ -0.26
PFDN1-204ENST00000512707 RPGRQ92834 1020 aaKnown RBP13.44□□□□□ -0.26
PFDN1-204ENST00000512707 BRIP1Q9BX63 1249 aa13.44□□□□□ -0.26
PFDN1-204ENST00000512707 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
PFDN1-204ENST00000512707 MYH3P11055 1940 aa13.43□□□□□ -0.26
PFDN1-204ENST00000512707 IGHMBP2P38935 993 aaKnown RBP13.43□□□□□ -0.26
PFDN1-204ENST00000512707 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
PFDN1-204ENST00000512707 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
PFDN1-204ENST00000512707 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
PFDN1-204ENST00000512707 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
PFDN1-204ENST00000512707 GREM2Q9H772 168 aa13.43□□□□□ -0.26
PFDN1-204ENST00000512707 COPRSQ9NQ92 184 aa13.43□□□□□ -0.26
PFDN1-204ENST00000512707 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
PFDN1-204ENST00000512707 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
PFDN1-204ENST00000512707 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
PFDN1-204ENST00000512707 LRRCC1Q9C099 1032 aa13.42□□□□□ -0.26
PFDN1-204ENST00000512707 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
PFDN1-204ENST00000512707 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
PFDN1-204ENST00000512707 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
PFDN1-204ENST00000512707 APBB1O00213 710 aa13.41□□□□□ -0.26
PFDN1-204ENST00000512707 CIAO1O76071 339 aa13.41□□□□□ -0.26
PFDN1-204ENST00000512707 ANKRD45Q5TZF3 282 aa13.41□□□□□ -0.26
PFDN1-204ENST00000512707 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
PFDN1-204ENST00000512707 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
PFDN1-204ENST00000512707 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
PFDN1-204ENST00000512707 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
PFDN1-204ENST00000512707 SIL1Q9H173 461 aa13.41□□□□□ -0.26
PFDN1-204ENST00000512707 IL15P40933 162 aaPredicted RBP13.4□□□□□ -0.26
PFDN1-204ENST00000512707 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
PFDN1-204ENST00000512707 PTPN12Q05209 780 aaKnown RBP13.4□□□□□ -0.26
PFDN1-204ENST00000512707 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
PFDN1-204ENST00000512707 CNNM1Q9NRU3 951 aa13.4□□□□□ -0.26
PFDN1-204ENST00000512707 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
PFDN1-204ENST00000512707 H0YIN7 160 aa13.39□□□□□ -0.27
PFDN1-204ENST00000512707 EYA2O00167 538 aa13.39□□□□□ -0.27
PFDN1-204ENST00000512707 NUCB1Q02818 461 aa13.39□□□□□ -0.27
PFDN1-204ENST00000512707 CRY2Q49AN0 593 aa13.39□□□□□ -0.27
PFDN1-204ENST00000512707 CHD1LQ86WJ1 897 aa13.39□□□□□ -0.27
PFDN1-204ENST00000512707 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
PFDN1-204ENST00000512707 NPR1P16066 1061 aa13.38□□□□□ -0.27
PFDN1-204ENST00000512707 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
PFDN1-204ENST00000512707 TMC4Q7Z404 712 aa13.38□□□□□ -0.27
PFDN1-204ENST00000512707 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
PFDN1-204ENST00000512707 CLASRPQ8N2M8 674 aaKnown RBP13.38□□□□□ -0.27
PFDN1-204ENST00000512707 KLHDC4Q8TBB5 520 aa13.38□□□□□ -0.27
PFDN1-204ENST00000512707 RHPN1Q8TCX5 695 aa13.38□□□□□ -0.27
PFDN1-204ENST00000512707 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
PFDN1-204ENST00000512707 CEP126Q9P2H0 1117 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms