RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.25
COPS4-206ENST00000509093 ZDHHC9Q9Y397 364 aa13.46□□□□□ -0.25
COPS4-206ENST00000509093 ST18O60284 1047 aa13.46□□□□□ -0.26
COPS4-206ENST00000509093 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.26
COPS4-206ENST00000509093 CASP7P55210 303 aa13.46□□□□□ -0.26
COPS4-206ENST00000509093 HLFQ16534 295 aa13.46□□□□□ -0.26
COPS4-206ENST00000509093 DNTTIP2Q5QJE6 756 aaKnown RBP13.46□□□□□ -0.26
COPS4-206ENST00000509093 INTS5Q6P9B9 1019 aaKnown RBP13.46□□□□□ -0.26
COPS4-206ENST00000509093 LRRCC1Q9C099 1032 aa13.46□□□□□ -0.26
COPS4-206ENST00000509093 TSPY26PQ9H489 355 aa13.46□□□□□ -0.26
COPS4-206ENST00000509093 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.26
COPS4-206ENST00000509093 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.26
COPS4-206ENST00000509093 TSHZ3Q63HK5 1081 aa13.45□□□□□ -0.26
COPS4-206ENST00000509093 SEPT12Q8IYM1 358 aa13.45□□□□□ -0.26
COPS4-206ENST00000509093 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
COPS4-206ENST00000509093 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
COPS4-206ENST00000509093 RNF214Q8ND24 703 aa13.44□□□□□ -0.26
COPS4-206ENST00000509093 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
COPS4-206ENST00000509093 H7C1W4 665 aa13.44□□□□□ -0.26
COPS4-206ENST00000509093 CRKLP46109 303 aaKnown RBP13.44□□□□□ -0.26
COPS4-206ENST00000509093 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
COPS4-206ENST00000509093 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
COPS4-206ENST00000509093 ZGPATQ8N5A5 531 aaKnown RBP13.44□□□□□ -0.26
COPS4-206ENST00000509093 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
COPS4-206ENST00000509093 NSFL1CQ9UNZ2 370 aaKnown RBP13.44□□□□□ -0.26
COPS4-206ENST00000509093 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
COPS4-206ENST00000509093 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
COPS4-206ENST00000509093 TCIRG1Q13488 830 aa13.43□□□□□ -0.26
COPS4-206ENST00000509093 MAP3K15Q6ZN16 1313 aa13.43□□□□□ -0.26
COPS4-206ENST00000509093 ISCA1Q9BUE6 129 aa13.43□□□□□ -0.26
COPS4-206ENST00000509093 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
COPS4-206ENST00000509093 CBX1P83916 185 aa13.43□□□□□ -0.26
COPS4-206ENST00000509093 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
COPS4-206ENST00000509093 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
COPS4-206ENST00000509093 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
COPS4-206ENST00000509093 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
COPS4-206ENST00000509093 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.43□□□□□ -0.26
COPS4-206ENST00000509093 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 NOLC1Q14978 699 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPS4-206ENST00000509093 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
COPS4-206ENST00000509093 GPTP24298 496 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 PDE1AP54750 535 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 FOXO4P98177 505 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 HDAC5Q9UQL6 1122 aa13.42□□□□□ -0.26
COPS4-206ENST00000509093 RAB11FIP3O75154 756 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 PHF14O94880 888 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
COPS4-206ENST00000509093 EIF5P55010 431 aaKnown RBP13.41□□□□□ -0.26
COPS4-206ENST00000509093 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 UVSSAQ2YD98 709 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 GIGYF2Q6Y7W6 1299 aaKnown RBP13.41□□□□□ -0.26
COPS4-206ENST00000509093 SMIM5Q71RC9 77 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 DZIP3Q86Y13 1208 aaKnown RBP13.41□□□□□ -0.26
COPS4-206ENST00000509093 FAM184AQ8NB25 1140 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 TSC1Q92574 1164 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 SIL1Q9H173 461 aa13.41□□□□□ -0.26
COPS4-206ENST00000509093 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
COPS4-206ENST00000509093 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
COPS4-206ENST00000509093 RABL6Q3YEC7 729 aaPredicted RBP13.4□□□□□ -0.26
COPS4-206ENST00000509093 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 MYH14Q7Z406 1995 aaKnown RBP13.39□□□□□ -0.27
COPS4-206ENST00000509093 SASH1O94885 1247 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 SDSP20132 328 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 CASC1Q6TDU7 716 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 COL15A1P39059 1388 aa13.39□□□□□ -0.27
COPS4-206ENST00000509093 BRD1O95696 1058 aa13.38□□□□□ -0.27
COPS4-206ENST00000509093 MX1P20591 662 aa13.38□□□□□ -0.27
COPS4-206ENST00000509093 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
COPS4-206ENST00000509093 PDCL2Q8N4E4 241 aa13.38□□□□□ -0.27
COPS4-206ENST00000509093 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
COPS4-206ENST00000509093 NLRP10Q86W26 655 aa13.38□□□□□ -0.27
COPS4-206ENST00000509093 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
COPS4-206ENST00000509093 BTAF1O14981 1849 aa13.38□□□□□ -0.27
COPS4-206ENST00000509093 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
COPS4-206ENST00000509093 HSP90AB4PQ58FF6 505 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 CHMP3Q9Y3E7 222 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 UBN2Q6ZU65 1347 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 REC8O95072 547 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 G3BP1Q13283 466 aaKnown RBP eCLIP13.37□□□□□ -0.27
COPS4-206ENST00000509093 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 RREB1Q92766 1687 aa13.37□□□□□ -0.27
COPS4-206ENST00000509093 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
COPS4-206ENST00000509093 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
COPS4-206ENST00000509093 ANKRD7Q92527 254 aa13.36□□□□□ -0.27
COPS4-206ENST00000509093 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
COPS4-206ENST00000509093 DIAPH3Q9NSV4 1193 aa13.36□□□□□ -0.27
COPS4-206ENST00000509093 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
COPS4-206ENST00000509093 ZNF34Q8IZ26 560 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms