RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 GSDMDP57764 484 aa16.78■□□□□ 0.28
TRIM41-204ENST00000508930 NLRP6P59044 892 aa16.78■□□□□ 0.28
TRIM41-204ENST00000508930 ERCC6LQ2NKX8 1250 aa16.78■□□□□ 0.28
TRIM41-204ENST00000508930 MNS1Q8NEH6 495 aa16.78■□□□□ 0.28
TRIM41-204ENST00000508930 TMEM131LA2VDJ0 1609 aa16.78■□□□□ 0.28
TRIM41-204ENST00000508930 DLC1Q96QB1 1528 aa16.77■□□□□ 0.28
TRIM41-204ENST00000508930 TPM4P67936 248 aa16.77■□□□□ 0.28
TRIM41-204ENST00000508930 TEX35Q5T0J7 233 aa16.77■□□□□ 0.28
TRIM41-204ENST00000508930 SYT10Q6XYQ8 523 aa16.77■□□□□ 0.28
TRIM41-204ENST00000508930 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
TRIM41-204ENST00000508930 ARGLU1Q9NWB6 273 aaPredicted RBP16.77■□□□□ 0.28
TRIM41-204ENST00000508930 FSIP1Q8NA03 581 aa16.77■□□□□ 0.28
TRIM41-204ENST00000508930 ERCC4Q92889 916 aaPredicted RBP16.77■□□□□ 0.28
TRIM41-204ENST00000508930 FLT4P35916 1363 aa16.77■□□□□ 0.27
TRIM41-204ENST00000508930 PPFIA3O75145 1194 aa16.77■□□□□ 0.27
TRIM41-204ENST00000508930 LRRC2Q9BYS8 371 aa16.77■□□□□ 0.27
TRIM41-204ENST00000508930 A0A0D9SFI3 127 aa16.76■□□□□ 0.27
TRIM41-204ENST00000508930 TMC6Q7Z403 805 aa16.76■□□□□ 0.27
TRIM41-204ENST00000508930 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
TRIM41-204ENST00000508930 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRIM41-204ENST00000508930 TEFQ10587 303 aa16.76■□□□□ 0.27
TRIM41-204ENST00000508930 IQCB1Q15051 598 aa16.76■□□□□ 0.27
TRIM41-204ENST00000508930 RBM43Q6ZSC3 357 aaKnown RBP16.76■□□□□ 0.27
TRIM41-204ENST00000508930 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
TRIM41-204ENST00000508930 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
TRIM41-204ENST00000508930 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
TRIM41-204ENST00000508930 UBXN4Q92575 508 aa16.76■□□□□ 0.27
TRIM41-204ENST00000508930 GUCY1B3Q02153 619 aa16.75■□□□□ 0.27
TRIM41-204ENST00000508930 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
TRIM41-204ENST00000508930 KRT32Q14532 448 aa16.75■□□□□ 0.27
TRIM41-204ENST00000508930 SARM1Q6SZW1 724 aa16.75■□□□□ 0.27
TRIM41-204ENST00000508930 ZNF396Q96N95 335 aaPredicted RBP16.75■□□□□ 0.27
TRIM41-204ENST00000508930 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
TRIM41-204ENST00000508930 ARHGAP29Q52LW3 1261 aa16.75■□□□□ 0.27
TRIM41-204ENST00000508930 NEK1Q96PY6 1258 aa16.75■□□□□ 0.27
TRIM41-204ENST00000508930 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
TRIM41-204ENST00000508930 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
TRIM41-204ENST00000508930 TMCO3Q6UWJ1 677 aa16.74■□□□□ 0.27
TRIM41-204ENST00000508930 Q6ZUG5 572 aa16.74■□□□□ 0.27
TRIM41-204ENST00000508930 NYAP1Q6ZVC0 841 aa16.74■□□□□ 0.27
TRIM41-204ENST00000508930 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
TRIM41-204ENST00000508930 RESTQ13127 1097 aa16.74■□□□□ 0.27
TRIM41-204ENST00000508930 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
TRIM41-204ENST00000508930 KCNB2Q92953 911 aa16.74■□□□□ 0.27
TRIM41-204ENST00000508930 FTOQ9C0B1 505 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRIM41-204ENST00000508930 TAF6LQ9Y6J9 622 aa16.74■□□□□ 0.27
TRIM41-204ENST00000508930 CCZ1BP86790 482 aa16.73■□□□□ 0.27
TRIM41-204ENST00000508930 CCZ1P86791 482 aaPredicted RBP16.73■□□□□ 0.27
TRIM41-204ENST00000508930 MAP3K2Q9Y2U5 619 aa16.73■□□□□ 0.27
TRIM41-204ENST00000508930 GNL2Q13823 731 aaKnown RBP16.73■□□□□ 0.27
TRIM41-204ENST00000508930 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
TRIM41-204ENST00000508930 IGSF1Q8N6C5 1336 aa16.72■□□□□ 0.27
TRIM41-204ENST00000508930 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
TRIM41-204ENST00000508930 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
TRIM41-204ENST00000508930 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
TRIM41-204ENST00000508930 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
TRIM41-204ENST00000508930 IFNKQ9P0W0 207 aa16.72■□□□□ 0.27
TRIM41-204ENST00000508930 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
TRIM41-204ENST00000508930 BIN1O00499 593 aa16.72■□□□□ 0.27
TRIM41-204ENST00000508930 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
TRIM41-204ENST00000508930 URI1O94763 535 aaPredicted RBP16.71■□□□□ 0.27
TRIM41-204ENST00000508930 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
TRIM41-204ENST00000508930 SLFNL1Q499Z3 407 aa16.71■□□□□ 0.27
TRIM41-204ENST00000508930 FAM177A1Q8N128 213 aaPredicted RBP16.71■□□□□ 0.27
TRIM41-204ENST00000508930 CCDC150Q8NCX0 1101 aa16.71■□□□□ 0.27
TRIM41-204ENST00000508930 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
TRIM41-204ENST00000508930 FAM160A1Q05DH4 1040 aa16.71■□□□□ 0.27
TRIM41-204ENST00000508930 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
TRIM41-204ENST00000508930 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
TRIM41-204ENST00000508930 PLEKHG3A1L390 1219 aa16.7■□□□□ 0.26
TRIM41-204ENST00000508930 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
TRIM41-204ENST00000508930 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
TRIM41-204ENST00000508930 STK38Q15208 465 aa16.7■□□□□ 0.26
TRIM41-204ENST00000508930 USP28Q96RU2 1077 aa16.7■□□□□ 0.26
TRIM41-204ENST00000508930 CLCN6P51797 869 aa16.7■□□□□ 0.26
TRIM41-204ENST00000508930 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.7■□□□□ 0.265e-8■■■□□ 17.9
TRIM41-204ENST00000508930 TLR7Q9NYK1 1049 aaKnown RBP16.69■□□□□ 0.26
TRIM41-204ENST00000508930 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
TRIM41-204ENST00000508930 PPP1R13BQ96KQ4 1090 aa16.69■□□□□ 0.26
TRIM41-204ENST00000508930 XPO4Q9C0E2 1151 aaKnown RBP16.69■□□□□ 0.26
TRIM41-204ENST00000508930 GOLPH3LQ9H4A5 285 aa16.69■□□□□ 0.26
TRIM41-204ENST00000508930 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
TRIM41-204ENST00000508930 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
TRIM41-204ENST00000508930 GPS2Q13227 327 aa16.69■□□□□ 0.26
TRIM41-204ENST00000508930 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 BTBD11A6QL63 1104 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 KCNQ3O43525 872 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 DHX40Q8IX18 779 aaKnown RBP16.68■□□□□ 0.26
TRIM41-204ENST00000508930 A2ML1A8K2U0 1454 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
TRIM41-204ENST00000508930 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
TRIM41-204ENST00000508930 RCOR1Q9UKL0 485 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 USP6P35125 1406 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 A0A1B0GVL5 298 aa16.68■□□□□ 0.26
TRIM41-204ENST00000508930 MRPS27Q92552 414 aaKnown RBP16.68■□□□□ 0.26
TRIM41-204ENST00000508930 CCP110O43303 1012 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 CCDC129Q6ZRS4 1044 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 IMPACTQ9P2X3 320 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms