RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 LCMT1Q9UIC8 334 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 CD163L1Q9NR16 1453 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 HECW2Q9P2P5 1572 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 A0A0D9SFI3 127 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 CWF19L2Q2TBE0 894 aaKnown RBP8.93□□□□□ -0.98
NEDD9-208ENST00000504387 VPS53Q5VIR6 699 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 TTLL5Q6EMB2 1281 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 ERO1AQ96HE7 468 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 GOLPH3LQ9H4A5 285 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 STAP2Q9UGK3 403 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 RSPH14Q9UHP6 348 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 AMOTL2Q9Y2J4 779 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 EID1Q9Y6B2 187 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 GNAT3A8MTJ3 354 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 KCNQ3O43525 872 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 KINO60870 393 aaKnown RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 PNMA6AP0CW24 399 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 LMAN1P49257 510 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 CCZ1BP86790 482 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 CCZ1P86791 482 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 BMS1Q14692 1282 aaKnown RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 ZNF589Q86UQ0 364 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 FSIP1Q8NA03 581 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 RUFY2Q8WXA3 655 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 GJB4Q9NTQ9 266 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 DDX19AQ9NUU7 478 aaKnown RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 NPHP3Q7Z494 1330 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 SLC27A2O14975 620 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 PHACTR2O75167 634 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 TMCO3Q6UWJ1 677 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 CCDC73Q6ZRK6 1079 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 PDILTQ8N807 584 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 TDRD7Q8NHU6 1098 aaKnown RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 SMARCE1Q969G3 411 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 XPO4Q9C0E2 1151 aaKnown RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 ZNF330Q9Y3S2 320 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 NRXN1Q9ULB1 1477 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 PLA2G4AP47712 749 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 SF3A1Q15459 793 aaKnown RBP8.92□□□□□ -0.98
NEDD9-208ENST00000504387 ZSWIM6Q9HCJ5 1215 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 CHPF2Q9P2E5 772 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 PPP6R1Q9UPN7 881 aa8.92□□□□□ -0.98
NEDD9-208ENST00000504387 ZFYVE9O95405 1425 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 HTATSF1O43719 755 aaKnown RBP8.91□□□□□ -0.98
NEDD9-208ENST00000504387 E4F1Q66K89 784 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-208ENST00000504387 CCDC191Q8NCU4 936 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 ZSCAN31Q96LW9 406 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-208ENST00000504387 UTP14AQ9BVJ6 771 aaKnown RBP8.91□□□□□ -0.98
NEDD9-208ENST00000504387 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-208ENST00000504387 FHOD1Q9Y613 1164 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 TSPOAP1O95153 1857 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 KIAA0232Q92628 1395 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 MYL6BP14649 208 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 IQCB1Q15051 598 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 DPCR1Q3MIW9 517 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 Q6ZUG5 572 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 LRRC59Q96AG4 307 aaKnown RBP8.91□□□□□ -0.98
NEDD9-208ENST00000504387 USP28Q96RU2 1077 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 LGR6Q9HBX8 967 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 ERBB3P21860 1342 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 CCDC171Q6TFL3 1326 aa8.91□□□□□ -0.98
NEDD9-208ENST00000504387 GLRX3O76003 335 aaKnown RBP8.9□□□□□ -0.98
NEDD9-208ENST00000504387 ATP1A3P13637 1013 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 SFPQP23246 707 aaKnown RBP eCLIP8.9□□□□□ -0.984e-6■■□□□ 13.1
NEDD9-208ENST00000504387 MCM6Q14566 821 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 WWC2Q6AWC2 1192 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 PPP1R13BQ96KQ4 1090 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 PDCP20941 246 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 OAS2P29728 719 aaKnown RBP8.9□□□□□ -0.98
NEDD9-208ENST00000504387 TOB2Q14106 344 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-208ENST00000504387 NYAP1Q6ZVC0 841 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 ECHDC1Q9NTX5 307 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 FEZ2Q9UHY8 353 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-208ENST00000504387 PTPRMP28827 1452 aa8.9□□□□□ -0.98
NEDD9-208ENST00000504387 A0A0G2JLW4 131 aa8.9□□□□□ -0.99
NEDD9-208ENST00000504387 LTKP29376 864 aa8.9□□□□□ -0.99
NEDD9-208ENST00000504387 APOBRQ0VD83 1088 aa8.9□□□□□ -0.99
NEDD9-208ENST00000504387 NECTIN1Q15223 517 aa8.9□□□□□ -0.99
NEDD9-208ENST00000504387 ARMCX5Q6P1M9 558 aa8.9□□□□□ -0.99
NEDD9-208ENST00000504387 SSH3Q8TE77 659 aa8.9□□□□□ -0.99
NEDD9-208ENST00000504387 RABEP2Q9H5N1 569 aa8.9□□□□□ -0.99
NEDD9-208ENST00000504387 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.99
NEDD9-208ENST00000504387 DIP2CQ9Y2E4 1556 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 MAP2P11137 1827 aaKnown RBP8.89□□□□□ -0.99
NEDD9-208ENST00000504387 KARSQ15046 597 aaKnown RBP8.89□□□□□ -0.99
NEDD9-208ENST00000504387 STX1AQ16623 288 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 DHX40Q8IX18 779 aaKnown RBP8.89□□□□□ -0.99
NEDD9-208ENST00000504387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.89□□□□□ -0.992e-8■■□□□ 11.9
NEDD9-208ENST00000504387 EDC4Q6P2E9 1401 aaKnown RBP8.89□□□□□ -0.99
NEDD9-208ENST00000504387 NEXMIFQ5QGS0 1516 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 SETBP1Q9Y6X0 1596 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 TFRCP02786 760 aaKnown RBP8.89□□□□□ -0.99
NEDD9-208ENST00000504387 CYP2C19P33261 490 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 PSME1Q06323 249 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 ZNF530Q6P9A1 599 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-208ENST00000504387 CREBRFQ8IUR6 639 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 CEP57L1Q8IYX8 460 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 IL17REQ8NFR9 667 aa8.89□□□□□ -0.99
NEDD9-208ENST00000504387 HINFPQ9BQA5 517 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms