RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 RARAP10276 462 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ZAP70P43403 619 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 PHLDB3Q6NSJ2 640 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 C8orf86Q6ZUL3 223 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ZNF417Q8TAU3 575 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 HELQQ8TDG4 1101 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ZNF587Q96SQ5 575 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 EFCC1Q9HA90 598 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 NAGPAQ9UK23 515 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 USTQ9Y2C2 406 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ABTB2Q8N961 1025 aa7.08□□□□□ -1.28
PDLIM1P4-201ENST00000504327 GPR152Q8TDT2 470 aa7.08□□□□□ -1.28
PDLIM1P4-201ENST00000504327 TRIM11Q96F44 468 aa7.08□□□□□ -1.28
PDLIM1P4-201ENST00000504327 DCAF5Q96JK2 942 aa7.08□□□□□ -1.28
PDLIM1P4-201ENST00000504327 EGFRP00533 1210 aa7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 MLLT1Q03111 559 aaPredicted RBP7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 MTMR3Q13615 1198 aa7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 DHX32Q7L7V1 743 aaKnown RBP7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 ATCAYQ86WG3 371 aa7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 MICALL1Q8N3F8 863 aa7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 RETREG2Q8NC44 543 aa7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 GTF3C2Q8WUA4 911 aaPredicted RBP7.07□□□□□ -1.28
PDLIM1P4-201ENST00000504327 MAP3K6O95382 1288 aa7.06□□□□□ -1.28
PDLIM1P4-201ENST00000504327 C20orf204Q6ZNR8 217 aa7.06□□□□□ -1.28
PDLIM1P4-201ENST00000504327 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
PDLIM1P4-201ENST00000504327 C11orf16Q9NQ32 467 aa7.06□□□□□ -1.28
PDLIM1P4-201ENST00000504327 UBAP1LF5GYI3 381 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 PIK3R2O00459 728 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 CPB1P15086 417 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 MPSTP25325 297 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 COL9A3Q14050 684 aaPredicted RBP7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 PSAPL1Q6NUJ1 521 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 PIK3R5Q8WYR1 880 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 JPH1Q9HDC5 661 aaPredicted RBP7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 FAM13BQ9NYF5 915 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 CCDC180Q9P1Z9 1646 aa7.05□□□□□ -1.28
PDLIM1P4-201ENST00000504327 ZBTB42B2RXF5 422 aa7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 MMP20O60882 483 aa7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 ITGB2P05107 769 aa7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 GPLD1P80108 840 aa7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 ZNF211Q13398 564 aaPredicted RBP7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 FAM35AQ86V20 835 aa7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 PLVAPQ9BX97 442 aa7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 PRDM6Q9NQX0 595 aa7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 NOP53Q9NZM5 478 aaKnown RBP7.04□□□□□ -1.28
PDLIM1P4-201ENST00000504327 KRBA1A5PL33 1030 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 ABL1P00519 1130 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 NID1P14543 1247 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 PLA2G4EQ3MJ16 856 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 HFE2Q6ZVN8 426 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 TRPM4Q8TD43 1214 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 NUDT16Q96DE0 195 aaKnown RBP7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 LPIN3Q9BQK8 851 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 ANO2Q9NQ90 1003 aa7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 TLR7Q9NYK1 1049 aaKnown RBP7.03□□□□□ -1.28
PDLIM1P4-201ENST00000504327 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 LILRB5O75023 590 aa7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 EIF1AXP47813 144 aaKnown RBP7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 NRLP54845 237 aa7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 PERM1Q5SV97 790 aa7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 NLRP13Q86W25 1043 aa7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 EDEM1Q92611 657 aa7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 NSUN5Q96P11 429 aaKnown RBP7.02□□□□□ -1.29
PDLIM1P4-201ENST00000504327 PSAPP07602 524 aa7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 EIF2AK2P19525 551 aaKnown RBP7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 PLAURQ03405 335 aa7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 DNM1Q05193 864 aaKnown RBP7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 PCSK7Q16549 785 aa7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 NOM1Q5C9Z4 860 aaKnown RBP7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 B4GALNT3Q6L9W6 998 aa7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 ALYREFQ86V81 257 aaKnown RBP7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 MTMR7Q9Y216 660 aa7.01□□□□□ -1.29
PDLIM1P4-201ENST00000504327 J3QW42 95 aa7□□□□□ -1.29
PDLIM1P4-201ENST00000504327 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
PDLIM1P4-201ENST00000504327 PDGFAP04085 211 aa7□□□□□ -1.29
PDLIM1P4-201ENST00000504327 ARID4AP29374 1257 aaPredicted RBP7□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SERPINB4P48594 390 aa7□□□□□ -1.29
PDLIM1P4-201ENST00000504327 AFF1P51825 1210 aaKnown RBP7□□□□□ -1.29
PDLIM1P4-201ENST00000504327 FNDC3AQ9Y2H6 1198 aaKnown RBP7□□□□□ -1.29
PDLIM1P4-201ENST00000504327 A6NHS1 94 aa6.99□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SOX18P35713 384 aa6.99□□□□□ -1.29
PDLIM1P4-201ENST00000504327 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SMG9Q9H0W8 520 aaKnown RBP6.99□□□□□ -1.29
PDLIM1P4-201ENST00000504327 FRRS1LQ9P0K9 344 aa6.99□□□□□ -1.29
PDLIM1P4-201ENST00000504327 TMEM63CQ9P1W3 806 aa6.99□□□□□ -1.29
PDLIM1P4-201ENST00000504327 LOC102724428A0A0B4J2F2 783 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SPDYE3A6NKU9 549 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SPATA31C1P0DKV0 1188 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 HOXD8P13378 290 aaPredicted RBP6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 NPR3P17342 541 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 CHRNA4P43681 627 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SIK1P57059 783 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SF3B2Q13435 895 aaKnown RBP6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 GRIK5Q16478 980 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 TRAPPC3LQ5T215 181 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 COL13A1Q5TAT6 717 aaPredicted RBP6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 OR13H1Q8NG92 308 aa6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 ABI2Q9NYB9 513 aaPredicted RBP6.98□□□□□ -1.29
PDLIM1P4-201ENST00000504327 POLIQ9UNA4 740 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms