RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
PRDM2-213ENST00000503842 IFNL1Q8IU54 200 aa16.7■□□□□ 0.26
PRDM2-213ENST00000503842 KAZALD1Q96I82 304 aa16.7■□□□□ 0.26
PRDM2-213ENST00000503842 SUCLG2Q96I99 432 aa16.7■□□□□ 0.26
PRDM2-213ENST00000503842 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
PRDM2-213ENST00000503842 NTSR2O95665 410 aa16.69■□□□□ 0.26
PRDM2-213ENST00000503842 NFIXQ14938 502 aa16.69■□□□□ 0.26
PRDM2-213ENST00000503842 CEP85Q6P2H3 762 aa16.69■□□□□ 0.26
PRDM2-213ENST00000503842 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
PRDM2-213ENST00000503842 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
PRDM2-213ENST00000503842 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
PRDM2-213ENST00000503842 CDHR2Q9BYE9 1310 aa16.69■□□□□ 0.26
PRDM2-213ENST00000503842 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
PRDM2-213ENST00000503842 PPP1R42Q7Z4L9 355 aa16.68■□□□□ 0.26
PRDM2-213ENST00000503842 SIRT2Q8IXJ6 389 aa16.68■□□□□ 0.26
PRDM2-213ENST00000503842 ANKRD44Q8N8A2 993 aa16.68■□□□□ 0.26
PRDM2-213ENST00000503842 RNF25Q96BH1 459 aaPredicted RBP16.68■□□□□ 0.26
PRDM2-213ENST00000503842 SETDB2Q96T68 719 aa16.68■□□□□ 0.26
PRDM2-213ENST00000503842 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
PRDM2-213ENST00000503842 TM4SF1P30408 202 aa16.67■□□□□ 0.26
PRDM2-213ENST00000503842 HDAC1Q13547 482 aaPredicted RBP16.67■□□□□ 0.26
PRDM2-213ENST00000503842 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
PRDM2-213ENST00000503842 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
PRDM2-213ENST00000503842 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
PRDM2-213ENST00000503842 FAM89AQ96GI7 184 aa16.67■□□□□ 0.26
PRDM2-213ENST00000503842 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
PRDM2-213ENST00000503842 PLA2G12BQ9BX93 195 aa16.67■□□□□ 0.26
PRDM2-213ENST00000503842 SH3TC1Q8TE82 1336 aa16.67■□□□□ 0.26
PRDM2-213ENST00000503842 CARMIL3Q8ND23 1372 aa16.66■□□□□ 0.26
PRDM2-213ENST00000503842 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
PRDM2-213ENST00000503842 MTX1Q13505 466 aa16.66■□□□□ 0.26
PRDM2-213ENST00000503842 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
PRDM2-213ENST00000503842 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
PRDM2-213ENST00000503842 SYNE4Q8N205 404 aa16.66■□□□□ 0.26
PRDM2-213ENST00000503842 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
PRDM2-213ENST00000503842 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
PRDM2-213ENST00000503842 FOXO4P98177 505 aa16.65■□□□□ 0.26
PRDM2-213ENST00000503842 NYXQ9GZU5 481 aa16.65■□□□□ 0.26
PRDM2-213ENST00000503842 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
PRDM2-213ENST00000503842 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
PRDM2-213ENST00000503842 GALR2O43603 387 aaPredicted RBP16.64■□□□□ 0.25
PRDM2-213ENST00000503842 GABBR2O75899 941 aa16.64■□□□□ 0.25
PRDM2-213ENST00000503842 IGHDP01880 384 aa16.64■□□□□ 0.25
PRDM2-213ENST00000503842 DDR1Q08345 913 aa16.64■□□□□ 0.25
PRDM2-213ENST00000503842 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
PRDM2-213ENST00000503842 LAMB2P55268 1798 aa16.64■□□□□ 0.25
PRDM2-213ENST00000503842 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
PRDM2-213ENST00000503842 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
PRDM2-213ENST00000503842 NBPF5PQ86XG9 351 aaPredicted RBP16.63■□□□□ 0.25
PRDM2-213ENST00000503842 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
PRDM2-213ENST00000503842 SSH3Q8TE77 659 aa16.63■□□□□ 0.25
PRDM2-213ENST00000503842 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
PRDM2-213ENST00000503842 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
PRDM2-213ENST00000503842 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
PRDM2-213ENST00000503842 DDX60Q8IY21 1712 aaKnown RBP16.62■□□□□ 0.25
PRDM2-213ENST00000503842 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
PRDM2-213ENST00000503842 SLC10A5Q5PT55 438 aa16.62■□□□□ 0.25
PRDM2-213ENST00000503842 TPTE2Q6XPS3 522 aa16.62■□□□□ 0.25
PRDM2-213ENST00000503842 SLC16A10Q8TF71 515 aa16.62■□□□□ 0.25
PRDM2-213ENST00000503842 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 MYH3P11055 1940 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 PDE8AO60658 829 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 HMMRO75330 724 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 SERPINB2P05120 415 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 CSF1RP07333 972 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
PRDM2-213ENST00000503842 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
PRDM2-213ENST00000503842 PDAP1Q13442 181 aaKnown RBP16.61■□□□□ 0.25
PRDM2-213ENST00000503842 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 LMBR1LQ6UX01 489 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 RIC1Q4ADV7 1423 aa16.61■□□□□ 0.25
PRDM2-213ENST00000503842 NRXN2Q9P2S2 1712 aa16.6■□□□□ 0.25
PRDM2-213ENST00000503842 SRGAP3O43295 1099 aa16.6■□□□□ 0.25
PRDM2-213ENST00000503842 MMP10P09238 476 aa16.6■□□□□ 0.25
PRDM2-213ENST00000503842 CTSWP56202 376 aa16.6■□□□□ 0.25
PRDM2-213ENST00000503842 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
PRDM2-213ENST00000503842 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
PRDM2-213ENST00000503842 CNBD1Q8NA66 436 aa16.6■□□□□ 0.25
PRDM2-213ENST00000503842 RFX5P48382 616 aaPredicted RBP16.59■□□□□ 0.25
PRDM2-213ENST00000503842 SMC5Q8IY18 1101 aa16.59■□□□□ 0.25
PRDM2-213ENST00000503842 TTLL11Q8NHH1 800 aa16.59■□□□□ 0.25
PRDM2-213ENST00000503842 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.24
PRDM2-213ENST00000503842 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
PRDM2-213ENST00000503842 DCTPP1Q9H773 170 aa16.58■□□□□ 0.24
PRDM2-213ENST00000503842 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
PRDM2-213ENST00000503842 PSEN1P49768 467 aa16.57■□□□□ 0.24
PRDM2-213ENST00000503842 SF3B3Q15393 1217 aaKnown RBP16.57■□□□□ 0.24
PRDM2-213ENST00000503842 FAM161AQ3B820 660 aa16.57■□□□□ 0.24
PRDM2-213ENST00000503842 C3orf67Q6ZVT6 689 aa16.57■□□□□ 0.24
PRDM2-213ENST00000503842 PARP3Q9Y6F1 533 aa16.57■□□□□ 0.24
PRDM2-213ENST00000503842 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
PRDM2-213ENST00000503842 ST5P78524 1137 aa16.56■□□□□ 0.24
PRDM2-213ENST00000503842 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
PRDM2-213ENST00000503842 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
PRDM2-213ENST00000503842 COPRSQ9NQ92 184 aa16.56■□□□□ 0.24
PRDM2-213ENST00000503842 NOP58Q9Y2X3 529 aaKnown RBP16.56■□□□□ 0.24
PRDM2-213ENST00000503842 GREM2Q9H772 168 aa16.55■□□□□ 0.24
PRDM2-213ENST00000503842 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
PRDM2-213ENST00000503842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
PRDM2-213ENST00000503842 STK25O00506 426 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms