RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 COPRSQ9NQ92 184 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 HDAC5Q9UQL6 1122 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 ABCC12Q96J65 1359 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 RIC1Q4ADV7 1423 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 NRXN2Q9P2S2 1712 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 RAB11FIP3O75154 756 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 PHF14O94880 888 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 AK7Q96M32 723 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 IL1RAPL2Q9NP60 686 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 ANKRD31Q8N7Z5 1873 aa8.55□□□□□ -1.04
TOPBP1-203ENST00000503464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 IRS4O14654 1257 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 CTSWP56202 376 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 TSHZ3Q63HK5 1081 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 ATG9AQ7Z3C6 839 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 NPM2Q86SE8 214 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 NUTM1Q86Y26 1132 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 TTLL11Q8NHH1 800 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 ZNF594Q96JF6 807 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 UTP14AQ9BVJ6 771 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 SIL1Q9H173 461 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 OSBPL3Q9H4L5 887 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 ZNF652Q9Y2D9 606 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 SH3TC1Q8TE82 1336 aa8.54□□□□□ -1.04
TOPBP1-203ENST00000503464 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 PDE8AO60658 829 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 SSFA2P28290 1259 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 PDE1AP54750 535 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 BMP2KLQ5H9B9 411 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 TTC22Q5TAA0 569 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 KIF1BPQ96EK5 621 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 CCDC85AQ96PX6 553 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 CAMKK2Q96RR4 588 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 PUS3Q9BZE2 481 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 GREM2Q9H772 168 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 STAP2Q9UGK3 403 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 ZNF609O15014 1411 aa8.53□□□□□ -1.04
TOPBP1-203ENST00000503464 RTL9Q8NET4 1388 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 ZPR1O75312 459 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 SEC24BO95487 1268 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 MYCNP04198 464 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 GYS1P13807 737 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 MX1P20591 662 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 NFIXQ14938 502 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 LRRC24Q50LG9 513 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 HSP90AB4PQ58FF6 505 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 BICDL1Q6ZP65 573 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 ERC1Q8IUD2 1116 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 PI4K2BQ8TCG2 481 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 EAF2Q96CJ1 260 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 BCL11AQ9H165 835 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 ANO8Q9HCE9 1232 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 TLR7Q9NYK1 1049 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 CHMP3Q9Y3E7 222 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 RBM19Q9Y4C8 960 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
TOPBP1-203ENST00000503464 COL11A2P13942 1736 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 EYA2O00167 538 aa8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 CIAO1O76071 339 aa8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 ITGA6P23229 1130 aa8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 RFC4P35249 363 aa8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 DDR1Q08345 913 aa8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 TFCP2Q12800 502 aa8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 G3BP1Q13283 466 aaKnown RBP eCLIP8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 OS9Q13438 667 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 EZH2Q15910 746 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 AOX1Q06278 1338 aa8.51□□□□□ -1.05
TOPBP1-203ENST00000503464 AKAP11Q9UKA4 1901 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 CARMIL3Q8ND23 1372 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 C19orf67A6NJJ6 358 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 SDSP20132 328 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 IFIT5Q13325 482 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 SLC10A5Q5PT55 438 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 AACSQ86V21 672 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 COL23A1Q86Y22 540 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
TOPBP1-203ENST00000503464 TM4SF1P30408 202 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 IL15P40933 162 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 TNNI3KQ59H18 835 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 DEFB132Q7Z7B7 95 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 CLASRPQ8N2M8 674 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 VGLL2Q8N8G2 317 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 CCDC8Q9H0W5 538 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 DBNLQ9UJU6 430 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms