RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 C21orf2O43822 256 aa31.73■■■□□ 2.67
LSM6-202ENST00000502781 DDX46Q7L014 1031 aaKnown RBP31.73■■■□□ 2.67
LSM6-202ENST00000502781 TTLL11Q8NHH1 800 aa31.73■■■□□ 2.67
LSM6-202ENST00000502781 USP44Q9H0E7 712 aa31.73■■■□□ 2.67
LSM6-202ENST00000502781 NBPF7P0C2Y1 421 aaPredicted RBP31.72■■■□□ 2.67
LSM6-202ENST00000502781 CCDC152Q4G0S7 254 aa31.72■■■□□ 2.67
LSM6-202ENST00000502781 GRAPQ13588 217 aa31.71■■■□□ 2.67
LSM6-202ENST00000502781 GRAPLQ8TC17 118 aaPredicted RBP31.71■■■□□ 2.67
LSM6-202ENST00000502781 CSF1RP07333 972 aa31.7■■■□□ 2.67
LSM6-202ENST00000502781 SOGA3Q5TF21 947 aa31.7■■■□□ 2.67
LSM6-202ENST00000502781 RTL9Q8NET4 1388 aa31.7■■■□□ 2.67
LSM6-202ENST00000502781 BBOX1O75936 387 aa31.69■■■□□ 2.66
LSM6-202ENST00000502781 FOXO4P98177 505 aa31.69■■■□□ 2.66
LSM6-202ENST00000502781 ARHGAP27Q6ZUM4 889 aa31.68■■■□□ 2.66
LSM6-202ENST00000502781 SNED1Q8TER0 1413 aa31.68■■■□□ 2.66
LSM6-202ENST00000502781 KAZALD1Q96I82 304 aa31.68■■■□□ 2.66
LSM6-202ENST00000502781 ZNF219Q9P2Y4 722 aaPredicted RBP31.68■■■□□ 2.66
LSM6-202ENST00000502781 PPEF1O14829 653 aaPredicted RBP31.68■■■□□ 2.66
LSM6-202ENST00000502781 CELF1Q92879 486 aaKnown RBP31.68■■■□□ 2.66
LSM6-202ENST00000502781 CLUAP1Q96AJ1 413 aa31.68■■■□□ 2.66
LSM6-202ENST00000502781 SEC31BQ9NQW1 1179 aa31.68■■■□□ 2.66
LSM6-202ENST00000502781 EPHA10Q5JZY3 1008 aa31.67■■■□□ 2.66
LSM6-202ENST00000502781 CC2D2BQ6DHV5 1058 aa31.67■■■□□ 2.66
LSM6-202ENST00000502781 OLFM4Q6UX06 510 aa31.67■■■□□ 2.66
LSM6-202ENST00000502781 CACNA1SQ13698 1873 aa31.67■■■□□ 2.66
LSM6-202ENST00000502781 NFKBIEO00221 500 aa31.66■■■□□ 2.66
LSM6-202ENST00000502781 SUCLG2Q96I99 432 aa31.66■■■□□ 2.66
LSM6-202ENST00000502781 CCDC85AQ96PX6 553 aaPredicted RBP31.66■■■□□ 2.66
LSM6-202ENST00000502781 GREM2Q9H772 168 aa31.66■■■□□ 2.66
LSM6-202ENST00000502781 COL4A1P02462 1669 aa31.66■■■□□ 2.66
LSM6-202ENST00000502781 MYH3P11055 1940 aa31.65■■■□□ 2.66
LSM6-202ENST00000502781 CCDC93Q567U6 631 aa31.65■■■□□ 2.66
LSM6-202ENST00000502781 TMC4Q7Z404 712 aa31.65■■■□□ 2.66
LSM6-202ENST00000502781 ATP6V0A2Q9Y487 856 aa31.65■■■□□ 2.66
LSM6-202ENST00000502781 RPS8P62241 208 aaKnown RBP31.64■■■□□ 2.66
LSM6-202ENST00000502781 DZIP1LQ8IYY4 767 aaKnown RBP31.64■■■□□ 2.66
LSM6-202ENST00000502781 LTBP3Q9NS15 1303 aa31.63■■■□□ 2.65
LSM6-202ENST00000502781 RLBP1P12271 317 aa31.63■■■□□ 2.65
LSM6-202ENST00000502781 SLC51AQ86UW1 340 aa31.63■■■□□ 2.65
LSM6-202ENST00000502781 SP8Q8IXZ3 490 aa31.63■■■□□ 2.65
LSM6-202ENST00000502781 TMEM57Q8N5G2 664 aa31.63■■■□□ 2.65
LSM6-202ENST00000502781 TAF1P21675 1872 aa31.62■■■□□ 2.65
LSM6-202ENST00000502781 RTKN2Q8IZC4 609 aa31.62■■■□□ 2.65
LSM6-202ENST00000502781 RABL6Q3YEC7 729 aaPredicted RBP31.61■■■□□ 2.65
LSM6-202ENST00000502781 GRIPAP1Q4V328 841 aa31.61■■■□□ 2.65
LSM6-202ENST00000502781 LMBR1LQ6UX01 489 aa31.61■■■□□ 2.65
LSM6-202ENST00000502781 FER1L6Q2WGJ9 1857 aa31.61■■■□□ 2.65
LSM6-202ENST00000502781 FAM161AQ3B820 660 aa31.6■■■□□ 2.65
LSM6-202ENST00000502781 MEIS3Q99687 375 aa31.6■■■□□ 2.65
LSM6-202ENST00000502781 ITGA6P23229 1130 aa31.59■■■□□ 2.65
LSM6-202ENST00000502781 PRELPP51888 382 aa31.59■■■□□ 2.65
LSM6-202ENST00000502781 FTSJ3Q8IY81 847 aaKnown RBP31.59■■■□□ 2.65
LSM6-202ENST00000502781 ANKRD44Q8N8A2 993 aa31.59■■■□□ 2.65
LSM6-202ENST00000502781 CDC5LQ99459 802 aaKnown RBP31.59■■■□□ 2.65
LSM6-202ENST00000502781 BICC1Q9H694 974 aaKnown RBP31.59■■■□□ 2.65
LSM6-202ENST00000502781 UBTFL1P0CB47 393 aaPredicted RBP31.58■■■□□ 2.65
LSM6-202ENST00000502781 RASSF7Q02833 373 aa31.58■■■□□ 2.65
LSM6-202ENST00000502781 TAOK3Q9H2K8 898 aa31.58■■■□□ 2.65
LSM6-202ENST00000502781 CHD4Q14839 1912 aa31.57■■■□□ 2.65
LSM6-202ENST00000502781 ANKRD18AQ8IVF6 992 aa31.57■■■□□ 2.64
LSM6-202ENST00000502781 PSMD1Q99460 953 aa31.57■■■□□ 2.64
LSM6-202ENST00000502781 FKBP4Q02790 459 aaKnown RBP eCLIP31.56■■■□□ 2.64
LSM6-202ENST00000502781 LRRC37AA6NMS7 1700 aa31.56■■■□□ 2.64
LSM6-202ENST00000502781 PLIN1O60240 522 aa31.56■■■□□ 2.64
LSM6-202ENST00000502781 GNAI3P08754 354 aa31.56■■■□□ 2.64
LSM6-202ENST00000502781 MS4A1P11836 297 aa31.56■■■□□ 2.64
LSM6-202ENST00000502781 TMX4Q9H1E5 349 aaPredicted RBP31.55■■■□□ 2.64
LSM6-202ENST00000502781 BSDC1Q9NW68 430 aaPredicted RBP31.55■■■□□ 2.64
LSM6-202ENST00000502781 HDAC5Q9UQL6 1122 aa31.55■■■□□ 2.64
LSM6-202ENST00000502781 ANKRD18BA2A2Z9 1011 aa31.54■■■□□ 2.64
LSM6-202ENST00000502781 LMNB1P20700 586 aa31.54■■■□□ 2.64
LSM6-202ENST00000502781 IFIT5Q13325 482 aaKnown RBP31.54■■■□□ 2.64
LSM6-202ENST00000502781 PANK1Q8TE04 598 aa31.54■■■□□ 2.64
LSM6-202ENST00000502781 RTFDC1Q9BY42 306 aaPredicted RBP31.53■■■□□ 2.64
LSM6-202ENST00000502781 C9orf131Q5VYM1 1079 aa31.52■■■□□ 2.64
LSM6-202ENST00000502781 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.52■■■□□ 2.64
LSM6-202ENST00000502781 CHMP3Q9Y3E7 222 aa31.52■■■□□ 2.64
LSM6-202ENST00000502781 SBF1O95248 1867 aa31.51■■■□□ 2.64
LSM6-202ENST00000502781 CCDC57Q2TAC2 916 aa31.51■■■□□ 2.63
LSM6-202ENST00000502781 MPNDQ8N594 471 aa31.51■■■□□ 2.63
LSM6-202ENST00000502781 LRRFIP2Q9Y608 721 aaKnown RBP31.51■■■□□ 2.63
LSM6-202ENST00000502781 IGHMBP2P38935 993 aaKnown RBP31.5■■■□□ 2.63
LSM6-202ENST00000502781 ITPRIPQ8IWB1 547 aa31.5■■■□□ 2.63
LSM6-202ENST00000502781 ZBTB7BO15156 539 aaPredicted RBP31.49■■■□□ 2.63
LSM6-202ENST00000502781 PDE3AQ14432 1141 aa31.49■■■□□ 2.63
LSM6-202ENST00000502781 PODXL2Q9NZ53 605 aa31.49■■■□□ 2.63
LSM6-202ENST00000502781 DPP8Q6V1X1 898 aaPredicted RBP31.48■■■□□ 2.63
LSM6-202ENST00000502781 RNF181Q9P0P0 153 aa31.48■■■□□ 2.63
LSM6-202ENST00000502781 GPSM2P81274 684 aa31.47■■■□□ 2.63
LSM6-202ENST00000502781 ZNF277Q9NRM2 450 aaPredicted RBP31.47■■■□□ 2.63
LSM6-202ENST00000502781 MINPP1Q9UNW1 487 aa31.47■■■□□ 2.63
LSM6-202ENST00000502781 DUOX1Q9NRD9 1551 aa31.47■■■□□ 2.63
LSM6-202ENST00000502781 MPHOSPH8Q99549 860 aa31.46■■■□□ 2.63
LSM6-202ENST00000502781 NSFL1CQ9UNZ2 370 aaKnown RBP31.46■■■□□ 2.63
LSM6-202ENST00000502781 LTBP1Q14766 1721 aa31.46■■■□□ 2.63
LSM6-202ENST00000502781 GNAI2P04899 355 aa31.44■■■□□ 2.62
LSM6-202ENST00000502781 YY1P25490 414 aa31.44■■■□□ 2.62
LSM6-202ENST00000502781 IARSP41252 1262 aaKnown RBP31.44■■■□□ 2.62
LSM6-202ENST00000502781 RFX5P48382 616 aaPredicted RBP31.44■■■□□ 2.62
LSM6-202ENST00000502781 MTX1Q13505 466 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms