RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 LARGE2Q8N3Y3 721 aa8.59□□□□□ -1.03
RFC1-204ENST00000502706 XAGE2Q96GT9 111 aa8.59□□□□□ -1.03
RFC1-204ENST00000502706 FHDC1Q9C0D6 1143 aaPredicted RBP8.59□□□□□ -1.03
RFC1-204ENST00000502706 CRISPLD1Q9H336 500 aa8.59□□□□□ -1.03
RFC1-204ENST00000502706 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
RFC1-204ENST00000502706 TMA7Q9Y2S6 64 aaKnown RBP8.59□□□□□ -1.03
RFC1-204ENST00000502706 GAPVD1Q14C86 1478 aa8.58□□□□□ -1.04
RFC1-204ENST00000502706 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
RFC1-204ENST00000502706 CLDN10P78369 228 aa8.58□□□□□ -1.04
RFC1-204ENST00000502706 FKBP4Q02790 459 aaKnown RBP eCLIP8.58□□□□□ -1.04
RFC1-204ENST00000502706 OCLNQ16625 522 aa8.58□□□□□ -1.04
RFC1-204ENST00000502706 FIGNL1Q6PIW4 674 aa8.58□□□□□ -1.04
RFC1-204ENST00000502706 GTF3C2Q8WUA4 911 aaPredicted RBP8.58□□□□□ -1.04
RFC1-204ENST00000502706 PRIMPOLQ96LW4 560 aa8.58□□□□□ -1.04
RFC1-204ENST00000502706 SPATA31C1P0DKV0 1188 aa8.57□□□□□ -1.04
RFC1-204ENST00000502706 ITGAEP38570 1179 aa8.57□□□□□ -1.04
RFC1-204ENST00000502706 SEC13P55735 322 aa8.57□□□□□ -1.04
RFC1-204ENST00000502706 RSPO4Q2I0M5 234 aaPredicted RBP8.57□□□□□ -1.04
RFC1-204ENST00000502706 PHTF2Q8N3S3 785 aa8.57□□□□□ -1.04
RFC1-204ENST00000502706 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
RFC1-204ENST00000502706 ABCA5Q8WWZ7 1642 aa8.57□□□□□ -1.04
RFC1-204ENST00000502706 MYCP01106 439 aaPredicted RBP8.56□□□□□ -1.04
RFC1-204ENST00000502706 ADH6P28332 368 aa8.56□□□□□ -1.04
RFC1-204ENST00000502706 ARHGAP4P98171 946 aa8.56□□□□□ -1.04
RFC1-204ENST00000502706 SIX5Q8N196 739 aa8.56□□□□□ -1.04
RFC1-204ENST00000502706 BRPF3Q9ULD4 1205 aa8.56□□□□□ -1.04
RFC1-204ENST00000502706 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
RFC1-204ENST00000502706 ABCA10Q8WWZ4 1543 aa8.55□□□□□ -1.04
RFC1-204ENST00000502706 FOXD4L6Q3SYB3 417 aaPredicted RBP8.55□□□□□ -1.04
RFC1-204ENST00000502706 FOXD4L3Q6VB84 417 aaPredicted RBP8.55□□□□□ -1.04
RFC1-204ENST00000502706 NT5DC4Q86YG4 428 aa8.55□□□□□ -1.04
RFC1-204ENST00000502706 RHBDD1Q8TEB9 315 aa8.55□□□□□ -1.04
RFC1-204ENST00000502706 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
RFC1-204ENST00000502706 LNPKQ9C0E8 428 aa8.55□□□□□ -1.04
RFC1-204ENST00000502706 AVENQ9NQS1 362 aaPredicted RBP8.55□□□□□ -1.04
RFC1-204ENST00000502706 CHIC2Q9UKJ5 165 aa8.55□□□□□ -1.04
RFC1-204ENST00000502706 ATP2B1P20020 1258 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 FGD1P98174 961 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 RAD51AP2Q09MP3 1159 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 ECM1Q16610 540 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 NKAPLQ5M9Q1 402 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 ARTNQ5T4W7 220 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 SLC43A3Q8NBI5 491 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 TMEM87AQ8NBN3 555 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 ZFP64Q9NPA5 681 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 PRKAG2Q9UGJ0 569 aa8.54□□□□□ -1.04
RFC1-204ENST00000502706 GRIN2AQ12879 1464 aa8.53□□□□□ -1.04
RFC1-204ENST00000502706 P4HBP07237 508 aaKnown RBP8.53□□□□□ -1.04
RFC1-204ENST00000502706 XPCQ01831 940 aaPredicted RBP8.53□□□□□ -1.04
RFC1-204ENST00000502706 FAM182BQ5T319 152 aa8.53□□□□□ -1.04
RFC1-204ENST00000502706 ZNF662Q6ZS27 426 aa8.53□□□□□ -1.04
RFC1-204ENST00000502706 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
RFC1-204ENST00000502706 ZCCHC2Q9C0B9 1178 aaKnown RBP8.53□□□□□ -1.04
RFC1-204ENST00000502706 SEPT3Q9UH03 358 aa8.53□□□□□ -1.04
RFC1-204ENST00000502706 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 FCHSD1Q86WN1 690 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 ARMC5Q96C12 935 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 TINF2Q9BSI4 451 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 TGIF2Q9GZN2 237 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 CCSER2Q9H7U1 834 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 MRS2Q9HD23 443 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 KLF15Q9UIH9 416 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 ADAMTS12P58397 1594 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 ERCC6L2Q5T890 1561 aa8.52□□□□□ -1.05
RFC1-204ENST00000502706 TLDC2A0PJX2 215 aa8.51□□□□□ -1.05
RFC1-204ENST00000502706 ZBTB7BO15156 539 aaPredicted RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 DKK1O94907 266 aa8.51□□□□□ -1.05
RFC1-204ENST00000502706 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.05
RFC1-204ENST00000502706 GNL2Q13823 731 aaKnown RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 CCDC102BQ68D86 513 aa8.51□□□□□ -1.05
RFC1-204ENST00000502706 NOL8Q76FK4 1167 aaKnown RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 DHX37Q8IY37 1157 aaKnown RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 DHX38Q92620 1227 aaKnown RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 CAPN10Q9HC96 672 aa8.51□□□□□ -1.05
RFC1-204ENST00000502706 METTL5Q9NRN9 209 aaKnown RBP8.51□□□□□ -1.05
RFC1-204ENST00000502706 CEP170Q5SW79 1584 aa8.51□□□□□ -1.05
RFC1-204ENST00000502706 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 ATXN7O15265 892 aaPredicted RBP8.5□□□□□ -1.05
RFC1-204ENST00000502706 DYRK3O43781 588 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 GTF2IP78347 998 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 LDLRAD1Q5T700 205 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 RNF34Q969K3 372 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 HINFPQ9BQA5 517 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 RBCK1Q9BYM8 510 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 KIAA1024Q9UPX6 916 aa8.5□□□□□ -1.05
RFC1-204ENST00000502706 NUP160Q12769 1436 aa8.49□□□□□ -1.05
RFC1-204ENST00000502706 WRNQ14191 1432 aaPredicted RBP eCLIP8.49□□□□□ -1.05
RFC1-204ENST00000502706 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
RFC1-204ENST00000502706 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
RFC1-204ENST00000502706 CCDC144BQ3MJ40 725 aa8.49□□□□□ -1.05
RFC1-204ENST00000502706 NBPF11Q86T75 865 aa8.49□□□□□ -1.05
RFC1-204ENST00000502706 MKNK1Q9BUB5 465 aa8.49□□□□□ -1.05
RFC1-204ENST00000502706 DOLKQ9UPQ8 538 aa8.49□□□□□ -1.05
RFC1-204ENST00000502706 SHROOM2Q13796 1616 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms